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The map label for this gene is yqfO [H]

Identifier: 56963458

GI number: 56963458

Start: 1821653

End: 1822774

Strand: Direct

Name: yqfO [H]

Synonym: ABC1693

Alternate gene names: 56963458

Gene position: 1821653-1822774 (Clockwise)

Preceding gene: 56963457

Following gene: 56963462

Centisome position: 42.33

GC content: 46.08

Gene sequence:

>1122_bases
ATGAAAAACACGATTGCAGCAAATACGCTTATTCAATACTTTGAGTCGTTTGCCCCAAAGTCTTATGCGCTGGAAGGCGA
TAAAAACGGTTTAATGGTTGGGTCACTGAAAAAAAAGGTCAAAAAAGCAATGGTCGCCCTTGATGTACTGGAAAAAACGA
TCGATGAAGCGATTGAAAAGGACGTTGACTTTATCCTGGCCCACCATCCGTTGTTGTTCCATCCTCTTAAACAAATCGAT
GTAGACACGCCGATGGGGAGAATGATAAAAAAAGCAATTGAACATGAGATTACTATTTATGCTGCCCATACGAATCTTGA
TGTGGCCGAAGGGGGCGTTAATGATTTGCTTGCAGAACGCCTTCAAATCAAAGATAGCAATGTGCTGGCGCCGACCTATA
CAGAAACATTGCAAAAGCTCGTTGCTTTTGTTCCGGCTTCCCATGCGAAACAAATCCGTGAGGCCCTTGGCGCTGCTGGT
GCTGGCCACATTGGCCACTATAGCCACTGTTCCTTTTCGGCGGAGGGAATTGGGCGTTTTCGTCCACAAGAAGGAACAAA
CCCTTATATTGGCACGATAGGGAAAGAAGAAGAAGTAGGCGAAGTACGCATTGAAACCATTGTACCTGCCAATAGGAGCG
GCAAGGTCATTGCGGCTTTGGTTAAGGCGCATCCGTATGAGGAACCTGCCTACGACTTGTATCCACTTGATCAACCACAA
TTTCAACGAGGACTCGGTCGTATTGGAAAAGTGGAGGGCGACCATACGCTAGCCTCATATGTTGAATTTGTTAAACAGGC
GCTAGGTGTAAAAACGGTCCGTGTTGTTGGTGAGTTGGATACGAAAATTAGAAAAGCCGCTGTGCTCGGAGGCGATGGCA
ATAAGTATGTGATGCAAGCCAAACGAGCTGGCGCAGACGTGCTCATCACTGGAGATTTGTATTACCACGTTGCTCAAGAC
GCATTAATGGCAGGCATGTGTGTCATTGATGCTGGCCATCATATCGAGGCGATTATGAAAGAAGGCGTTGCGGAGAAAAT
TGCAGCATTATTGAGCGAAAACGGCTACCACATTGATATATTCGCTTCTGCCCAGAGCACAGAGCCTTTTCAATTTTTAT
GA

Upstream 100 bases:

>100_bases
TATTAGAGGAACTAAAAAAAGGGAAACAGACAAAGGAAATGAGCGACAAACAAAGAAAGCTTGAAAGAAAGTTGCAGCTT
GTGAAGGAGGCATTGGGAGA

Downstream 100 bases:

>100_bases
GAATAAAAAAACAAGCAAGCCGCGCTTTCGCGTCGCTTGCTTGTTGAACGTTATTTTTTGACACGCACTTTTGGAAGGAT
TTTCTCGATCGGCACTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MKNTIAANTLIQYFESFAPKSYALEGDKNGLMVGSLKKKVKKAMVALDVLEKTIDEAIEKDVDFILAHHPLLFHPLKQID
VDTPMGRMIKKAIEHEITIYAAHTNLDVAEGGVNDLLAERLQIKDSNVLAPTYTETLQKLVAFVPASHAKQIREALGAAG
AGHIGHYSHCSFSAEGIGRFRPQEGTNPYIGTIGKEEEVGEVRIETIVPANRSGKVIAALVKAHPYEEPAYDLYPLDQPQ
FQRGLGRIGKVEGDHTLASYVEFVKQALGVKTVRVVGELDTKIRKAAVLGGDGNKYVMQAKRAGADVLITGDLYYHVAQD
ALMAGMCVIDAGHHIEAIMKEGVAEKIAALLSENGYHIDIFASAQSTEPFQFL

Sequences:

>Translated_373_residues
MKNTIAANTLIQYFESFAPKSYALEGDKNGLMVGSLKKKVKKAMVALDVLEKTIDEAIEKDVDFILAHHPLLFHPLKQID
VDTPMGRMIKKAIEHEITIYAAHTNLDVAEGGVNDLLAERLQIKDSNVLAPTYTETLQKLVAFVPASHAKQIREALGAAG
AGHIGHYSHCSFSAEGIGRFRPQEGTNPYIGTIGKEEEVGEVRIETIVPANRSGKVIAALVKAHPYEEPAYDLYPLDQPQ
FQRGLGRIGKVEGDHTLASYVEFVKQALGVKTVRVVGELDTKIRKAAVLGGDGNKYVMQAKRAGADVLITGDLYYHVAQD
ALMAGMCVIDAGHHIEAIMKEGVAEKIAALLSENGYHIDIFASAQSTEPFQFL
>Mature_373_residues
MKNTIAANTLIQYFESFAPKSYALEGDKNGLMVGSLKKKVKKAMVALDVLEKTIDEAIEKDVDFILAHHPLLFHPLKQID
VDTPMGRMIKKAIEHEITIYAAHTNLDVAEGGVNDLLAERLQIKDSNVLAPTYTETLQKLVAFVPASHAKQIREALGAAG
AGHIGHYSHCSFSAEGIGRFRPQEGTNPYIGTIGKEEEVGEVRIETIVPANRSGKVIAALVKAHPYEEPAYDLYPLDQPQ
FQRGLGRIGKVEGDHTLASYVEFVKQALGVKTVRVVGELDTKIRKAAVLGGDGNKYVMQAKRAGADVLITGDLYYHVAQD
ALMAGMCVIDAGHHIEAIMKEGVAEKIAALLSENGYHIDIFASAQSTEPFQFL

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Homo sapiens, GI209862879, Length=376, Percent_Identity=26.063829787234, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI215272360, Length=376, Percent_Identity=26.063829787234, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI56605983, Length=376, Percent_Identity=26.063829787234, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI215272362, Length=124, Percent_Identity=33.8709677419355, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI19921430, Length=190, Percent_Identity=30.5263157894737, Blast_Score=86, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678
- InterPro:   IPR017221 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 40656; Mature: 40656

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTIAANTLIQYFESFAPKSYALEGDKNGLMVGSLKKKVKKAMVALDVLEKTIDEAIEK
CCCCHHHHHHHHHHHHHCCCCEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVDFILAHHPLLFHPLKQIDVDTPMGRMIKKAIEHEITIYAAHTNLDVAEGGVNDLLAER
HHHHHHHCCCHHHCCHHHCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHH
LQIKDSNVLAPTYTETLQKLVAFVPASHAKQIREALGAAGAGHIGHYSHCSFSAEGIGRF
HHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
RPQEGTNPYIGTIGKEEEVGEVRIETIVPANRSGKVIAALVKAHPYEEPAYDLYPLDQPQ
CCCCCCCCCEECCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHH
FQRGLGRIGKVEGDHTLASYVEFVKQALGVKTVRVVGELDTKIRKAAVLGGDGNKYVMQA
HHHHHCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHEEECCCCCCEEHHH
KRAGADVLITGDLYYHVAQDALMAGMCVIDAGHHIEAIMKEGVAEKIAALLSENGYHIDI
HHCCCCEEEECHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEE
FASAQSTEPFQFL
EECCCCCCCCCCC
>Mature Secondary Structure
MKNTIAANTLIQYFESFAPKSYALEGDKNGLMVGSLKKKVKKAMVALDVLEKTIDEAIEK
CCCCHHHHHHHHHHHHHCCCCEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVDFILAHHPLLFHPLKQIDVDTPMGRMIKKAIEHEITIYAAHTNLDVAEGGVNDLLAER
HHHHHHHCCCHHHCCHHHCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHH
LQIKDSNVLAPTYTETLQKLVAFVPASHAKQIREALGAAGAGHIGHYSHCSFSAEGIGRF
HHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
RPQEGTNPYIGTIGKEEEVGEVRIETIVPANRSGKVIAALVKAHPYEEPAYDLYPLDQPQ
CCCCCCCCCEECCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHH
FQRGLGRIGKVEGDHTLASYVEFVKQALGVKTVRVVGELDTKIRKAAVLGGDGNKYVMQA
HHHHHCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHEEECCCCCCEEHHH
KRAGADVLITGDLYYHVAQDALMAGMCVIDAGHHIEAIMKEGVAEKIAALLSENGYHIDI
HHCCCCEEEECHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEE
FASAQSTEPFQFL
EECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]