| Definition | Bacillus clausii KSM-K16, complete genome. |
|---|---|
| Accession | NC_006582 |
| Length | 4,303,871 |
Click here to switch to the map view.
The map label for this gene is yqeV [H]
Identifier: 56963428
GI number: 56963428
Start: 1793238
End: 1794575
Strand: Direct
Name: yqeV [H]
Synonym: ABC1663
Alternate gene names: 56963428
Gene position: 1793238-1794575 (Clockwise)
Preceding gene: 56963427
Following gene: 56963429
Centisome position: 41.67
GC content: 45.29
Gene sequence:
>1338_bases TTGTCAACTGTTGCGTTTCATACATTAGGCTGTAAAGTAAACCATTACGAGACGGAAGCGATTTGGCAGCTGTTTAAACA AGAAGGCTATGAAAAAGTCGAGTTTGAACAGACTGCAGACGTCTATGTCATTAATACATGTACGGTCACCAATACAGGTG ACAAAAAAAGCAGGCAAGTCATTCGCCGCGCGATTCGCAAAAACCCAGACGCTGTTATTTGCGTAACTGGCTGTTACGCG CAAACGTCTCCTGCTGAAGTGATGGCCATTCCTGGGGTCGATATTGTTGTCGGTACGCAAGACCGCTCGAAAATGCTTGG TTACATCGACCAATATAAAAAAGAGCGGCAGCCAATCAACGCTGTCGGCAATATTATGAAATCACGGGTATATGAAGAAT TGGATGTGCCTTCATTTACGGATCGGACACGGGCGTCTTTAAAAATTCAAGAAGGCTGTAACAATTTCTGCACATTTTGC ATTATTCCTTGGGCGCGAGGGTTGATGCGTTCCCGCGATCCACAAGAAGTCGTGCGCCAAGCCCAGCAACTTGTTCATGC TGGCTACAAAGAAATCGTGTTGACTGGCATTCATACTGGCGGCTATGGCGAAGATTTGAAGGATTATAGCCTTGCCCGCT TGTTAGAGGATTTGGAAAAGGTAGAGGGGCTGAAACGGCTTCGTATTTCGTCGATTGAGGCGAGCCAATTAACCGACGAG GTCATTGCGGTGATCGGCAAATCAAGCAAAGTGGTCCGCCATATGCACATTCCGCTCCAATCTGGATCGGATACGGTGCT GAAACGGATGCGCAGGAAGTATACGATGGCCGCTTATGAAGAACGGATTGAAAAGTTAAAACAAGCCCTTCCACGGCTTG CGATTACGTCCGATGTCATTGTTGGGTTTCCTGGCGAGACAGAAGAAGAGTTCCAAGAAACATACGACTTTATCGCCAAA CATAAGTTCAGTGAATTGCATGTCTTTCCTTATTCGATGCGCACAGGTACGCCAGCTGCTCGGATGACAGACCAAATCGA TGAGGCCATAAAAAATGAACGTGTGCACCGCTTAATTGAACTGTCAAACCAATTAGCGAAAGAATATGCCTCAAGTTTTG AGAATGAAGTGCTTGAAGTCATTCCAGAAGAGCGAGATAAAGACAACCCTGAAAGCGGCTTGTTTGTCGGCTATACAGAT AACTATTTAAAAGTAAAACTAGAAGCTGATGAAACGATGATTGGAAAATTGGTGCGCGTAAAAATCAAAGAGGCGGGCTA TCCATATAACCGTGGCGAATTCGTCCGCGTTTTAGAAGATTACAAGCAAATTGTGTAA
Upstream 100 bases:
>100_bases TCTCTTGCAGCATAGGCCCTCGCATTGTCCGTACTGAAACGGCTGCTATGTACGTGTTAGCTGCTCTTTCGTACCAATTT GAATTATGAGGTGAATCCAG
Downstream 100 bases:
>100_bases AAAACGCATTCCGGAAAATTCCGGGATGCGTTTTTTTTATAGAGGGTGATCATTTATTCCGAATATCTTTCCCTACCAGC GCGTTTTATACTAAAAGCAA
Product: 2-methylthioadenine synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MSTVAFHTLGCKVNHYETEAIWQLFKQEGYEKVEFEQTADVYVINTCTVTNTGDKKSRQVIRRAIRKNPDAVICVTGCYA QTSPAEVMAIPGVDIVVGTQDRSKMLGYIDQYKKERQPINAVGNIMKSRVYEELDVPSFTDRTRASLKIQEGCNNFCTFC IIPWARGLMRSRDPQEVVRQAQQLVHAGYKEIVLTGIHTGGYGEDLKDYSLARLLEDLEKVEGLKRLRISSIEASQLTDE VIAVIGKSSKVVRHMHIPLQSGSDTVLKRMRRKYTMAAYEERIEKLKQALPRLAITSDVIVGFPGETEEEFQETYDFIAK HKFSELHVFPYSMRTGTPAARMTDQIDEAIKNERVHRLIELSNQLAKEYASSFENEVLEVIPEERDKDNPESGLFVGYTD NYLKVKLEADETMIGKLVRVKIKEAGYPYNRGEFVRVLEDYKQIV
Sequences:
>Translated_445_residues MSTVAFHTLGCKVNHYETEAIWQLFKQEGYEKVEFEQTADVYVINTCTVTNTGDKKSRQVIRRAIRKNPDAVICVTGCYA QTSPAEVMAIPGVDIVVGTQDRSKMLGYIDQYKKERQPINAVGNIMKSRVYEELDVPSFTDRTRASLKIQEGCNNFCTFC IIPWARGLMRSRDPQEVVRQAQQLVHAGYKEIVLTGIHTGGYGEDLKDYSLARLLEDLEKVEGLKRLRISSIEASQLTDE VIAVIGKSSKVVRHMHIPLQSGSDTVLKRMRRKYTMAAYEERIEKLKQALPRLAITSDVIVGFPGETEEEFQETYDFIAK HKFSELHVFPYSMRTGTPAARMTDQIDEAIKNERVHRLIELSNQLAKEYASSFENEVLEVIPEERDKDNPESGLFVGYTD NYLKVKLEADETMIGKLVRVKIKEAGYPYNRGEFVRVLEDYKQIV >Mature_444_residues STVAFHTLGCKVNHYETEAIWQLFKQEGYEKVEFEQTADVYVINTCTVTNTGDKKSRQVIRRAIRKNPDAVICVTGCYAQ TSPAEVMAIPGVDIVVGTQDRSKMLGYIDQYKKERQPINAVGNIMKSRVYEELDVPSFTDRTRASLKIQEGCNNFCTFCI IPWARGLMRSRDPQEVVRQAQQLVHAGYKEIVLTGIHTGGYGEDLKDYSLARLLEDLEKVEGLKRLRISSIEASQLTDEV IAVIGKSSKVVRHMHIPLQSGSDTVLKRMRRKYTMAAYEERIEKLKQALPRLAITSDVIVGFPGETEEEFQETYDFIAKH KFSELHVFPYSMRTGTPAARMTDQIDEAIKNERVHRLIELSNQLAKEYASSFENEVLEVIPEERDKDNPESGLFVGYTDN YLKVKLEADETMIGKLVRVKIKEAGYPYNRGEFVRVLEDYKQIV
Specific function: Unknown
COG id: COG0621
COG function: function code J; 2-methylthioadenine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 TRAM domain [H]
Homologues:
Organism=Homo sapiens, GI93277076, Length=438, Percent_Identity=28.7671232876712, Blast_Score=175, Evalue=6e-44, Organism=Homo sapiens, GI28872784, Length=391, Percent_Identity=26.8542199488491, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI28872782, Length=391, Percent_Identity=26.8542199488491, Blast_Score=162, Evalue=8e-40, Organism=Escherichia coli, GI1786882, Length=438, Percent_Identity=32.648401826484, Blast_Score=218, Evalue=4e-58, Organism=Escherichia coli, GI1787057, Length=376, Percent_Identity=32.7127659574468, Blast_Score=184, Evalue=7e-48, Organism=Caenorhabditis elegans, GI17553146, Length=386, Percent_Identity=27.979274611399, Blast_Score=161, Evalue=8e-40, Organism=Caenorhabditis elegans, GI71996771, Length=354, Percent_Identity=29.6610169491525, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI21356207, Length=475, Percent_Identity=27.7894736842105, Blast_Score=185, Evalue=5e-47, Organism=Drosophila melanogaster, GI19922432, Length=430, Percent_Identity=30.4651162790698, Blast_Score=173, Evalue=2e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR020612 - InterPro: IPR013848 - InterPro: IPR006467 - InterPro: IPR007197 - InterPro: IPR002792 [H]
Pfam domain/function: PF04055 Radical_SAM; PF01938 TRAM; PF00919 UPF0004 [H]
EC number: NA
Molecular weight: Translated: 50806; Mature: 50675
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: PS50926 TRAM ; PS01278 UPF0004
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVAFHTLGCKVNHYETEAIWQLFKQEGYEKVEFEQTADVYVINTCTVTNTGDKKSRQV CCCEEEEEECCEECCCHHHHHHHHHHHCCCCEECCCCCCCEEEEEEEEECCCCCHHHHHH IRRAIRKNPDAVICVTGCYAQTSPAEVMAIPGVDIVVGTQDRSKMLGYIDQYKKERQPIN HHHHHHCCCCEEEEEEECCCCCCCCCEEEECCCEEEECCCHHHHHHHHHHHHHHHCCCHH AVGNIMKSRVYEELDVPSFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPQEVVRQ HHHHHHHHHHHHHCCCCCCCCCHHHHEEHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHH AQQLVHAGYKEIVLTGIHTGGYGEDLKDYSLARLLEDLEKVEGLKRLRISSIEASQLTDE HHHHHHCCHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH VIAVIGKSSKVVRHMHIPLQSGSDTVLKRMRRKYTMAAYEERIEKLKQALPRLAITSDVI HHHHHCCCHHEEHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEE VGFPGETEEEFQETYDFIAKHKFSELHVFPYSMRTGTPAARMTDQIDEAIKNERVHRLIE EECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH LSNQLAKEYASSFENEVLEVIPEERDKDNPESGLFVGYTDNYLKVKLEADETMIGKLVRV HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEEEEEECCHHHHHHHHHE KIKEAGYPYNRGEFVRVLEDYKQIV EECCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure STVAFHTLGCKVNHYETEAIWQLFKQEGYEKVEFEQTADVYVINTCTVTNTGDKKSRQV CCEEEEEECCEECCCHHHHHHHHHHHCCCCEECCCCCCCEEEEEEEEECCCCCHHHHHH IRRAIRKNPDAVICVTGCYAQTSPAEVMAIPGVDIVVGTQDRSKMLGYIDQYKKERQPIN HHHHHHCCCCEEEEEEECCCCCCCCCEEEECCCEEEECCCHHHHHHHHHHHHHHHCCCHH AVGNIMKSRVYEELDVPSFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPQEVVRQ HHHHHHHHHHHHHCCCCCCCCCHHHHEEHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHH AQQLVHAGYKEIVLTGIHTGGYGEDLKDYSLARLLEDLEKVEGLKRLRISSIEASQLTDE HHHHHHCCHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH VIAVIGKSSKVVRHMHIPLQSGSDTVLKRMRRKYTMAAYEERIEKLKQALPRLAITSDVI HHHHHCCCHHEEHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEE VGFPGETEEEFQETYDFIAKHKFSELHVFPYSMRTGTPAARMTDQIDEAIKNERVHRLIE EECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH LSNQLAKEYASSFENEVLEVIPEERDKDNPESGLFVGYTDNYLKVKLEADETMIGKLVRV HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEEEEEECCHHHHHHHHHE KIKEAGYPYNRGEFVRVLEDYKQIV EECCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9023197; 9384377 [H]