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The map label for this gene is yhfE [H]

Identifier: 56963228

GI number: 56963228

Start: 1581503

End: 1582552

Strand: Direct

Name: yhfE [H]

Synonym: ABC1463

Alternate gene names: 56963228

Gene position: 1581503-1582552 (Clockwise)

Preceding gene: 56963227

Following gene: 56963231

Centisome position: 36.75

GC content: 44.38

Gene sequence:

>1050_bases
ATGTATGATAAAGAACTCCAGGGGATCATTTCCATTTTGAAAGACTTGGTCCACATTCCAAGTCCTTCAGGGTACACCGG
CGAAGCGATCGCCTATATTAGGCGTTTTTTGGAGGATGTCGGAATCCAGACTCAATTGTTAAATAAAGGGGCGCTCCTTG
CCACGATTGATGGGAAAAACAATGATAAGCAGCGAATGCTCACTGCCCATGTTGATACATTAGGGGCGATCGTGAAAGAC
ATTAAAGAGAACGGGCGATTGGCGATTGACAAAATTGGCGGATACGCGTTTCACTCCATTGAAGGGGAATATTGCCTCAT
CCATAAATCAGACAAAAGCACGGTGTCAGGAACGATTGTCATGCATCAATCTTCTGTCCATGTTTACAAGGACGCAGACA
CTGCAAAACGGAATGAAGAAAATATTGAAGTACGAATTGATGCCGCTGTCCATGATGAAAAAGACACGGAAGCATTAGGA
ATTGCCGTAGGAGATTTCATTAGTTTTGCTCCTCGTTTTGAGCAAACGCCGTCTGGTTTTATTAAATCGCGCCATTTGGA
TGATAAAGCGAGTGTGGCCTTGCTTTTGCAGTTAATGAAACAACTTGCAGGCAGCAAGATAAAGCTTCCTTATACGACCC
ATTTCCTCATTTCAAACAATGAAGAAATTGGATTCGGCGGAAACGCTGGGATTCCCGAAAAGGTGATTGAATATGTTGCC
GTCGATATGGGTGCCATTGGCGACGGCCAGCAAACCGATGAATTTACTGTTTCCATTTGTGCGAAAGACGGAAGCGGCCC
GTACCATTATGGATTGCGGACACACCTTGTTTCGCTATGCAAACAAGAGTCGATTCCATACAAATTAGACATTTATCCTT
ACTATAGCTCAGATGCATCTGCTGCTATTAAGGCAGGCCATGATTTAGTCCATGGCTTAATTGGGCCAGGCATTGAAGGT
TCCCATTCGATGGAACGGACCCATCAATCTTCACTGGAAGCCACCTATCGCCTTCTATGTGCATACACTTATTCGGAGAT
GAACCATTAA

Upstream 100 bases:

>100_bases
TGTTTTTCTCACACGCAAATTGGAACTTTGAATAATTGCGAGTTTGTAGCAAAGTCGCTATGATGAGAGGAAGGCTATAT
AGAAAGAAGGAACAGACAAA

Downstream 100 bases:

>100_bases
GAGGCGTATGGGGCTTGCACATAAAAAAAGCTGCCAAAGGGCAGCTTTTAAACTATAGCAAAACGCTCGCATTATCTCGT
TTGTATGCCGCTTTTTTAAG

Product: glucanase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MYDKELQGIISILKDLVHIPSPSGYTGEAIAYIRRFLEDVGIQTQLLNKGALLATIDGKNNDKQRMLTAHVDTLGAIVKD
IKENGRLAIDKIGGYAFHSIEGEYCLIHKSDKSTVSGTIVMHQSSVHVYKDADTAKRNEENIEVRIDAAVHDEKDTEALG
IAVGDFISFAPRFEQTPSGFIKSRHLDDKASVALLLQLMKQLAGSKIKLPYTTHFLISNNEEIGFGGNAGIPEKVIEYVA
VDMGAIGDGQQTDEFTVSICAKDGSGPYHYGLRTHLVSLCKQESIPYKLDIYPYYSSDASAAIKAGHDLVHGLIGPGIEG
SHSMERTHQSSLEATYRLLCAYTYSEMNH

Sequences:

>Translated_349_residues
MYDKELQGIISILKDLVHIPSPSGYTGEAIAYIRRFLEDVGIQTQLLNKGALLATIDGKNNDKQRMLTAHVDTLGAIVKD
IKENGRLAIDKIGGYAFHSIEGEYCLIHKSDKSTVSGTIVMHQSSVHVYKDADTAKRNEENIEVRIDAAVHDEKDTEALG
IAVGDFISFAPRFEQTPSGFIKSRHLDDKASVALLLQLMKQLAGSKIKLPYTTHFLISNNEEIGFGGNAGIPEKVIEYVA
VDMGAIGDGQQTDEFTVSICAKDGSGPYHYGLRTHLVSLCKQESIPYKLDIYPYYSSDASAAIKAGHDLVHGLIGPGIEG
SHSMERTHQSSLEATYRLLCAYTYSEMNH
>Mature_349_residues
MYDKELQGIISILKDLVHIPSPSGYTGEAIAYIRRFLEDVGIQTQLLNKGALLATIDGKNNDKQRMLTAHVDTLGAIVKD
IKENGRLAIDKIGGYAFHSIEGEYCLIHKSDKSTVSGTIVMHQSSVHVYKDADTAKRNEENIEVRIDAAVHDEKDTEALG
IAVGDFISFAPRFEQTPSGFIKSRHLDDKASVALLLQLMKQLAGSKIKLPYTTHFLISNNEEIGFGGNAGIPEKVIEYVA
VDMGAIGDGQQTDEFTVSICAKDGSGPYHYGLRTHLVSLCKQESIPYKLDIYPYYSSDASAAIKAGHDLVHGLIGPGIEG
SHSMERTHQSSLEATYRLLCAYTYSEMNH

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008007 [H]

Pfam domain/function: PF05343 Peptidase_M42 [H]

EC number: NA

Molecular weight: Translated: 38291; Mature: 38291

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDKELQGIISILKDLVHIPSPSGYTGEAIAYIRRFLEDVGIQTQLLNKGALLATIDGKN
CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCC
NDKQRMLTAHVDTLGAIVKDIKENGRLAIDKIGGYAFHSIEGEYCLIHKSDKSTVSGTIV
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCEEEEECCCCCCEEEEEE
MHQSSVHVYKDADTAKRNEENIEVRIDAAVHDEKDTEALGIAVGDFISFAPRFEQTPSGF
EEECCEEEEECCCHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHH
IKSRHLDDKASVALLLQLMKQLAGSKIKLPYTTHFLISNNEEIGFGGNAGIPEKVIEYVA
HHHCCCCCHHHHHHHHHHHHHHCCCEEECCEEEEEEEECCCEECCCCCCCCHHHHHHHHH
VDMGAIGDGQQTDEFTVSICAKDGSGPYHYGLRTHLVSLCKQESIPYKLDIYPYYSSDAS
HHCCCCCCCCCCCCEEEEEEEECCCCCEECCHHHHHHHHHHHCCCCEEEEEEEEECCCCH
AAIKAGHDLVHGLIGPGIEGSHSMERTHQSSLEATYRLLCAYTYSEMNH
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYDKELQGIISILKDLVHIPSPSGYTGEAIAYIRRFLEDVGIQTQLLNKGALLATIDGKN
CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCC
NDKQRMLTAHVDTLGAIVKDIKENGRLAIDKIGGYAFHSIEGEYCLIHKSDKSTVSGTIV
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCEEEEECCCCCCEEEEEE
MHQSSVHVYKDADTAKRNEENIEVRIDAAVHDEKDTEALGIAVGDFISFAPRFEQTPSGF
EEECCEEEEECCCHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHH
IKSRHLDDKASVALLLQLMKQLAGSKIKLPYTTHFLISNNEEIGFGGNAGIPEKVIEYVA
HHHCCCCCHHHHHHHHHHHHHHCCCEEECCEEEEEEEECCCEECCCCCCCCHHHHHHHHH
VDMGAIGDGQQTDEFTVSICAKDGSGPYHYGLRTHLVSLCKQESIPYKLDIYPYYSSDAS
HHCCCCCCCCCCCCEEEEEEEECCCCCEECCHHHHHHHHHHHCCCCEEEEEEEEECCCCH
AAIKAGHDLVHGLIGPGIEGSHSMERTHQSSLEATYRLLCAYTYSEMNH
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]