Click here to switch to the map view.

The map label for this gene is yhbA [H]

Identifier: 56963231

GI number: 56963231

Start: 1583805

End: 1584956

Strand: Direct

Name: yhbA [H]

Synonym: ABC1466

Alternate gene names: 56963231

Gene position: 1583805-1584956 (Clockwise)

Preceding gene: 56963228

Following gene: 56963232

Centisome position: 36.8

GC content: 46.96

Gene sequence:

>1152_bases
ATGGATTACGCCCAACTGAAAGCTGATTTGCTCGCTTATAGCGCTGAAATCGGCGTTGATAAACTGCGAATTGCATCTGC
TGAGCCATTTCTGTCATTAAAAGACCGTTTAATCGAGCACCAAGAGAAAGGATATGCTTCAGGCTTTGAACATCCGGTAT
TGGAAGAACGGGTCGATCCGCGGCTGAGCTTGCCAAGTGCACGTACGATTATCTCGATTGCCGTTGCCTATCCGACAAAA
ATGAAAAAAGCGCCTAAAAGCATTCCAGGGGCAAGGCGTGGCGTTTTTTCGCGCTCGTCATGGGGACAAGATTATCACAC
CGTCCTCAATGACCGTTTAAAAAAACTGGAGGCATTTTTGCGCGAACGGGTTGGGGAAACGGAAATGGTCCGAATGGTTG
ACACAGGTGCTTTATCAGACCGAGCTGTAGCAGAACGTGCTGGCATAGGCTGGTCAGCGAAAAATACGTTTACGATTACG
CCTGAATTTGGAAGCTTCGTATTCCTTGGCAACTTATTAACATCCTTGCCGTTCCCGTTAGATGAACCGCTTGAAGATTT
ATGTGGTTCATGCACAAAATGCATTGATGCGTGTCCAACTGGCGCTCTCGTTGGTCCCGGGGAACTGAATGCACAGGCTT
GTTTGTCGTACCAAACGCAAACGAAAGGATTTATGCCTGATGAGTATCGGGAAAAAATCGGGAATTATTTATACGGGTGG
GACACCTGCCAGCTAGTATGCCCATATAATAAAGGAATCGACAGCCATCACCATCAAGAAATGGAACCAGATCCAGAGCT
GTGCAAACCATTACTAGAGCCGTTGTTGTCGATAAGCAATCGTAAATTTAAAGAGCAGTTTGGCCATATGGCAGGCTCAT
GGCGTGGCAAAAAGCCGATCCAACGCAATGCCATTATCGCTCTTGCTCATTACAAGGAAAAAAGCGCTTTGCCGAAACTG
TGTGAATTGCTTGCTTCTGATCCTCGGCCTGTTATCCGTGGCACGGCAGCTTGGGCGATTGGCAAAATTGGCGGGTCGGA
AAAAGAGGAAAAAGCGCTGCTAAAAGCGAAAGAGACAGAAACGGACCAGCTTGTGCAAATTGAAATCGAAAAAGGGCTCG
ATCTGTTGAAAAAACAGAATGGGTCCCAATAA

Upstream 100 bases:

>100_bases
AAACCAATCGTCATAGCGACCTCCTAAAGTGATATATTCATTATCGTCGTATCGGTTGCTTAAATCAATAAAAGCGTATT
GCAAAAAAGGAGACAAGGGC

Downstream 100 bases:

>100_bases
TAAAGACGGCTTTAATCTTTTCAGGGAAGAAGGGAATGGCATGAGTTCGCTTAAGCAAATGTACGTCAAAGAAATGGAGA
GTCCCCTTGGATTGTTGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MDYAQLKADLLAYSAEIGVDKLRIASAEPFLSLKDRLIEHQEKGYASGFEHPVLEERVDPRLSLPSARTIISIAVAYPTK
MKKAPKSIPGARRGVFSRSSWGQDYHTVLNDRLKKLEAFLRERVGETEMVRMVDTGALSDRAVAERAGIGWSAKNTFTIT
PEFGSFVFLGNLLTSLPFPLDEPLEDLCGSCTKCIDACPTGALVGPGELNAQACLSYQTQTKGFMPDEYREKIGNYLYGW
DTCQLVCPYNKGIDSHHHQEMEPDPELCKPLLEPLLSISNRKFKEQFGHMAGSWRGKKPIQRNAIIALAHYKEKSALPKL
CELLASDPRPVIRGTAAWAIGKIGGSEKEEKALLKAKETETDQLVQIEIEKGLDLLKKQNGSQ

Sequences:

>Translated_383_residues
MDYAQLKADLLAYSAEIGVDKLRIASAEPFLSLKDRLIEHQEKGYASGFEHPVLEERVDPRLSLPSARTIISIAVAYPTK
MKKAPKSIPGARRGVFSRSSWGQDYHTVLNDRLKKLEAFLRERVGETEMVRMVDTGALSDRAVAERAGIGWSAKNTFTIT
PEFGSFVFLGNLLTSLPFPLDEPLEDLCGSCTKCIDACPTGALVGPGELNAQACLSYQTQTKGFMPDEYREKIGNYLYGW
DTCQLVCPYNKGIDSHHHQEMEPDPELCKPLLEPLLSISNRKFKEQFGHMAGSWRGKKPIQRNAIIALAHYKEKSALPKL
CELLASDPRPVIRGTAAWAIGKIGGSEKEEKALLKAKETETDQLVQIEIEKGLDLLKKQNGSQ
>Mature_383_residues
MDYAQLKADLLAYSAEIGVDKLRIASAEPFLSLKDRLIEHQEKGYASGFEHPVLEERVDPRLSLPSARTIISIAVAYPTK
MKKAPKSIPGARRGVFSRSSWGQDYHTVLNDRLKKLEAFLRERVGETEMVRMVDTGALSDRAVAERAGIGWSAKNTFTIT
PEFGSFVFLGNLLTSLPFPLDEPLEDLCGSCTKCIDACPTGALVGPGELNAQACLSYQTQTKGFMPDEYREKIGNYLYGW
DTCQLVCPYNKGIDSHHHQEMEPDPELCKPLLEPLLSISNRKFKEQFGHMAGSWRGKKPIQRNAIIALAHYKEKSALPKL
CELLASDPRPVIRGTAAWAIGKIGGSEKEEKALLKAKETETDQLVQIEIEKGLDLLKKQNGSQ

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HEAT-like PBS-type repeats [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=379, Percent_Identity=30.6068601583113, Blast_Score=178, Evalue=4e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR013542
- InterPro:   IPR009051
- InterPro:   IPR004155 [H]

Pfam domain/function: PF08331 DUF1730; PF03130 HEAT_PBS [H]

EC number: NA

Molecular weight: Translated: 42549; Mature: 42549

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYAQLKADLLAYSAEIGVDKLRIASAEPFLSLKDRLIEHQEKGYASGFEHPVLEERVDP
CCHHHHHHHHHHHHHHCCCHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCC
RLSLPSARTIISIAVAYPTKMKKAPKSIPGARRGVFSRSSWGQDYHTVLNDRLKKLEAFL
CCCCCCHHHHHHHHHHCCHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
RERVGETEMVRMVDTGALSDRAVAERAGIGWSAKNTFTITPEFGSFVFLGNLLTSLPFPL
HHHCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCC
DEPLEDLCGSCTKCIDACPTGALVGPGELNAQACLSYQTQTKGFMPDEYREKIGNYLYGW
CHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCEEECC
DTCQLVCPYNKGIDSHHHQEMEPDPELCKPLLEPLLSISNRKFKEQFGHMAGSWRGKKPI
CCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCC
QRNAIIALAHYKEKSALPKLCELLASDPRPVIRGTAAWAIGKIGGSEKEEKALLKAKETE
CCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHCCCCCCHHHHHHHHHHCCC
TDQLVQIEIEKGLDLLKKQNGSQ
CCCEEEEEHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDYAQLKADLLAYSAEIGVDKLRIASAEPFLSLKDRLIEHQEKGYASGFEHPVLEERVDP
CCHHHHHHHHHHHHHHCCCHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCC
RLSLPSARTIISIAVAYPTKMKKAPKSIPGARRGVFSRSSWGQDYHTVLNDRLKKLEAFL
CCCCCCHHHHHHHHHHCCHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
RERVGETEMVRMVDTGALSDRAVAERAGIGWSAKNTFTITPEFGSFVFLGNLLTSLPFPL
HHHCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCC
DEPLEDLCGSCTKCIDACPTGALVGPGELNAQACLSYQTQTKGFMPDEYREKIGNYLYGW
CHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCEEECC
DTCQLVCPYNKGIDSHHHQEMEPDPELCKPLLEPLLSISNRKFKEQFGHMAGSWRGKKPI
CCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCC
QRNAIIALAHYKEKSALPKLCELLASDPRPVIRGTAAWAIGKIGGSEKEEKALLKAKETE
CCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHCCCCCCHHHHHHHHHHCCC
TDQLVQIEIEKGLDLLKKQNGSQ
CCCEEEEEHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]