Click here to switch to the map view.

The map label for this gene is ynaD [H]

Identifier: 56963206

GI number: 56963206

Start: 1553701

End: 1554231

Strand: Direct

Name: ynaD [H]

Synonym: ABC1441

Alternate gene names: 56963206

Gene position: 1553701-1554231 (Clockwise)

Preceding gene: 56963205

Following gene: 56963207

Centisome position: 36.1

GC content: 49.15

Gene sequence:

>531_bases
ATGAAGGGGAAAAATGTCTATTTGCGTGAGTTTAAAATTGATGATTGGCATGACGTCCATGCGTATGCCTCGCTTGAACA
AGTCTGCCGGTACCAGACATGGGGCCCCAATAACGAAAATGATTCACAAAACTATGTTAAACAAGCGATTGCCGATGCTC
GCAAATGTCCTCGGACGAGGTTTGCCTTTGCAATTGCTCTGAAAAATAGGGAGCGCGTGGTCGGGGCCGCTGAGTTAGTT
ATCGACAGTGCTAACAGCAGCGGCACGATTGGCTACATTGTCCATCCTGATTATTGGGGACGAGGCGTAGCAACAGAGGC
AGCTACATGCCTGATAGACGATGGATTTAACCGGCTTAAACTCCACCGCATATGGGCTACATGCGATTCTCGTAACATTG
CTTCGGCCAAAGTATTAAAGAAGGTCGGGATGCAGCAGGAAGGGCGCTTGCGGGATCATTTGCGGCTGAGCGATGGCTGG
CGTGACTCGTTTGTCTTTGGTTTATTAGAAGATGAAAGAAGCCGGCTGTAG

Upstream 100 bases:

>100_bases
CTGGAACGGTTCAAGAAGTGGTATAAGCCAGCAGGTAGTTGATTGGTTTAAGCGAGTCGATCGATAACAGTCGATCATCG
GTAAAGGGAGGCAGACAAAA

Downstream 100 bases:

>100_bases
TGGCAAATGGTAGAACAGTGTTTAAGATAACGCTTTGGCTTCCTATAGCAATATGGTACAGTTAACATATAAAAAACGAA
CGAATAGAAAGAAGGCTGTT

Product: acetyltransferase

Products: Coenzyme A; H+; N8-Acetylspermidine [C]

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MKGKNVYLREFKIDDWHDVHAYASLEQVCRYQTWGPNNENDSQNYVKQAIADARKCPRTRFAFAIALKNRERVVGAAELV
IDSANSSGTIGYIVHPDYWGRGVATEAATCLIDDGFNRLKLHRIWATCDSRNIASAKVLKKVGMQQEGRLRDHLRLSDGW
RDSFVFGLLEDERSRL

Sequences:

>Translated_176_residues
MKGKNVYLREFKIDDWHDVHAYASLEQVCRYQTWGPNNENDSQNYVKQAIADARKCPRTRFAFAIALKNRERVVGAAELV
IDSANSSGTIGYIVHPDYWGRGVATEAATCLIDDGFNRLKLHRIWATCDSRNIASAKVLKKVGMQQEGRLRDHLRLSDGW
RDSFVFGLLEDERSRL
>Mature_176_residues
MKGKNVYLREFKIDDWHDVHAYASLEQVCRYQTWGPNNENDSQNYVKQAIADARKCPRTRFAFAIALKNRERVVGAAELV
IDSANSSGTIGYIVHPDYWGRGVATEAATCLIDDGFNRLKLHRIWATCDSRNIASAKVLKKVGMQQEGRLRDHLRLSDGW
RDSFVFGLLEDERSRL

Specific function: Regulates Polyamine Concentration By Their Degradation. Acts On Spermidine, Forming N(1)- And N(8)-Acetylspermidine. [C]

COG id: COG1670

COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: 2.3.1.57 [C]

Molecular weight: Translated: 20132; Mature: 20132

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGKNVYLREFKIDDWHDVHAYASLEQVCRYQTWGPNNENDSQNYVKQAIADARKCPRTR
CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHH
FAFAIALKNRERVVGAAELVIDSANSSGTIGYIVHPDYWGRGVATEAATCLIDDGFNRLK
EEEEEEECCCCHHHHHHHEEEECCCCCCEEEEEECCCCCCCCCCHHHHEEEEECCCCCEE
LHRIWATCDSRNIASAKVLKKVGMQQEGRLRDHLRLSDGWRDSFVFGLLEDERSRL
EEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHEECCCCCCCCEEEEEECCHHCCC
>Mature Secondary Structure
MKGKNVYLREFKIDDWHDVHAYASLEQVCRYQTWGPNNENDSQNYVKQAIADARKCPRTR
CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHH
FAFAIALKNRERVVGAAELVIDSANSSGTIGYIVHPDYWGRGVATEAATCLIDDGFNRLK
EEEEEEECCCCHHHHHHHEEEECCCCCCEEEEEECCCCCCCCCCHHHHEEEEECCCCCEE
LHRIWATCDSRNIASAKVLKKVGMQQEGRLRDHLRLSDGWRDSFVFGLLEDERSRL
EEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHEECCCCCCCCEEEEEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acetyl-CoA; Spermidine [C]

Specific reaction: Acetyl-CoA + Spermidine --> Coenzyme A + H+ + N8-Acetylspermidine [C]

General reaction: Acyl group transfer [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]