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The map label for this gene is 56963170

Identifier: 56963170

GI number: 56963170

Start: 1513188

End: 1515200

Strand: Direct

Name: 56963170

Synonym: ABC1399

Alternate gene names: NA

Gene position: 1513188-1515200 (Clockwise)

Preceding gene: 56963169

Following gene: 56963172

Centisome position: 35.16

GC content: 37.41

Gene sequence:

>2013_bases
ATGATTATTTCAAAATTGCATTTGAAAAACTTCAGGAGTTTTGGTGATAAGGGGACAACAGTAAAATTAAATAAGCTTTC
TGGTTTCGTTGGGGAAAACTCTGCAGGCAAGACTGCCTTAATACATGGTTTAGTTAAACTTTTTGGCGTGACTTCACACG
AACGAACATTAGAAAAGTCGGATTTTCATATTCCTAAACAAGCCAAAGTAGAAACCATAAAAGAATTACAACTTTCAATT
GAAGCTCGGATTGACTTTCCTGAATTACTGGAGACCGATCAAGAGAATTTGAGTCGAACAAGTATTCCTCCATTTATTAA
TCAACTCGTGGTTCGTGCTGCTACTGAAGCTCCTTATTTGCGTGTAAGATTAATCGCAAAATGGACCACCGATAACACTC
CTGAAGGTGAAATTGAACAGAAGCTATACTTTGTTACTGTTGCTGAAGATATCGATGAAACTGAAGAGGATCTAGTTCCA
GTGACTCCTCACCAACGTTCTTCAATTCAAGTCTTATATGTTCCTGCAGTTAGGGAGCCATCTTCGCAATTACGAAATGC
ATCAGGCACAATACTTTGGAGGATTTTAAATAATATTTCTTGGCCAGATGACATAAACGACTCTATTAAAGCAAGAATGG
AACCTGTGAATGAATTATTCGATAGCATTGAAGGAGTTTCGCATATAAGAAGTGTCATTGGAGAGGAATGGAAAAAATAC
CACAAGGATGCTCGTTATCAAGATGCAAAATTACAATTTAGCAGTTCTACACTTTCTGCAATTCTTAAAAAAATTGAAGT
GTCTTTTTCTCCAACCCATGATCTGGGCGAATATAGTGTAGAGAAACTGGGGGATGGTCTCCGATCTCTGTTTTATCTTT
CGTTGGTATCGTCCTTACTTGAAGCAGAGATTAAAATTACAGGTAAATCGAATGCTTCTTTGACTGTTCTGGCGGTAGAA
GAACCTGAGAATCATATATCTCCTCATCTACTGGGACGAGTGATGGAAAATCTGAAGGATATTTCTGGTAAATATAATGC
TCAAGTTGTTTTAACTTCACACAGTTCTTCAATTATTAAGCGGATAGATCCAGATAATCTTACTCACTTGAGAATTGACC
AGACTAGTTTTACAACAATGGTCAAGAAAATAATTTTGCCAAGTAAGACATCAGAGGCCTATACATACATCAAGGAAGCT
GTAAGAGCATTCCCTGAAATTTATTTTTCAAGATTAGTTATTTTGGGTGAGGGGGATTCAGAAGAGATCGTAATTCCCAG
GGTGCTTGCGGCTAACGGAATACATCCTGATGATTACGGAATATCGATTGTCCCTTTAGGGGGAAGACATGTTAACCATA
TGTGGAAGTTACTTAATGAGTTGAATATTCCTCATATTACTTTATTGGATTTGGATCGTGAACGTGGCGGTGGCGGTTGG
AGCAGGATTCAGTATGCAATTAAACAGTTATTGCTTTATGGCCGAAATCGTGAAGAATTATTAAGAATTTCTTGGTGTGG
GAAAAGAGAAGAAATTCTTAGCGATGCACAAGTTGAAGAAATGGACGAATATCCAATGACACCCGATTGGATTGCGTCTA
TGAATAATTTATGGCTGCCACGACTCATGGAAGATAATTATAATGTCTTTTATTCAGCACCTCTAGACTTAGATTTTCTT
ATGCTCGAAACATTTCCTTGTGCTTATAAGGAAACAGTACCTAGAGGACCCAGCATTCCTGATCGAGTTTCGCACCCTGG
TAAATATGCAGAAAAAATTAAAAGCGGCATAATTGCGGCATTAAAGAATGAAAAGGCAACAGGTCATACGTATTTAGAAG
AGCAACATGAACTTATGGTTTGGTATAATACGTTATTCCTTGGGCGAAGTAAACCGAGCACACATATTGAAGCCCTGTTA
AAATTGGATGATGACGATCTTATAATGTTCATACCTGATATTTTTCGTAGGTTAGTTACGAGAGTAAAAGAAATATTGCA
AAAGGAAGATTAA

Upstream 100 bases:

>100_bases
CAGGAAATTGTCGAATTAATATATTAAATATAAGAGTCATTGGAACTTGACAGTTTACTTATAAATGCTTAATTAGAGTG
TGGCGATATGAGGAGGCCTT

Downstream 100 bases:

>100_bases
GATCATGTTATATGTTAATTCAGAAAGCTGGCGTCCATCGGAAGGTATTACATTGGAACCAGCAGCAGAGATAGCAGTTA
AATCAAAACTAAACAATCTT

Product: hypothetical protein

Products: NA

Alternate protein names: SMC Domain Protein; Plasmid-Related Protein; RecF/RecN/SMC N Domain Protein; ATP-Dependent ExoDNAse Beta Subunit; ATP-Dependent OLD Family Endonuclease; ATPase; SMC Family Protein; Overcoming Lysogenization Defect Protein; ATP-Dependent Endonuclease Of OLD Family; Smc Domain Protein; DNA Helicase Associated Protein; Fis Family Transcriptional Regulator; Endonuclease

Number of amino acids: Translated: 670; Mature: 670

Protein sequence:

>670_residues
MIISKLHLKNFRSFGDKGTTVKLNKLSGFVGENSAGKTALIHGLVKLFGVTSHERTLEKSDFHIPKQAKVETIKELQLSI
EARIDFPELLETDQENLSRTSIPPFINQLVVRAATEAPYLRVRLIAKWTTDNTPEGEIEQKLYFVTVAEDIDETEEDLVP
VTPHQRSSIQVLYVPAVREPSSQLRNASGTILWRILNNISWPDDINDSIKARMEPVNELFDSIEGVSHIRSVIGEEWKKY
HKDARYQDAKLQFSSSTLSAILKKIEVSFSPTHDLGEYSVEKLGDGLRSLFYLSLVSSLLEAEIKITGKSNASLTVLAVE
EPENHISPHLLGRVMENLKDISGKYNAQVVLTSHSSSIIKRIDPDNLTHLRIDQTSFTTMVKKIILPSKTSEAYTYIKEA
VRAFPEIYFSRLVILGEGDSEEIVIPRVLAANGIHPDDYGISIVPLGGRHVNHMWKLLNELNIPHITLLDLDRERGGGGW
SRIQYAIKQLLLYGRNREELLRISWCGKREEILSDAQVEEMDEYPMTPDWIASMNNLWLPRLMEDNYNVFYSAPLDLDFL
MLETFPCAYKETVPRGPSIPDRVSHPGKYAEKIKSGIIAALKNEKATGHTYLEEQHELMVWYNTLFLGRSKPSTHIEALL
KLDDDDLIMFIPDIFRRLVTRVKEILQKED

Sequences:

>Translated_670_residues
MIISKLHLKNFRSFGDKGTTVKLNKLSGFVGENSAGKTALIHGLVKLFGVTSHERTLEKSDFHIPKQAKVETIKELQLSI
EARIDFPELLETDQENLSRTSIPPFINQLVVRAATEAPYLRVRLIAKWTTDNTPEGEIEQKLYFVTVAEDIDETEEDLVP
VTPHQRSSIQVLYVPAVREPSSQLRNASGTILWRILNNISWPDDINDSIKARMEPVNELFDSIEGVSHIRSVIGEEWKKY
HKDARYQDAKLQFSSSTLSAILKKIEVSFSPTHDLGEYSVEKLGDGLRSLFYLSLVSSLLEAEIKITGKSNASLTVLAVE
EPENHISPHLLGRVMENLKDISGKYNAQVVLTSHSSSIIKRIDPDNLTHLRIDQTSFTTMVKKIILPSKTSEAYTYIKEA
VRAFPEIYFSRLVILGEGDSEEIVIPRVLAANGIHPDDYGISIVPLGGRHVNHMWKLLNELNIPHITLLDLDRERGGGGW
SRIQYAIKQLLLYGRNREELLRISWCGKREEILSDAQVEEMDEYPMTPDWIASMNNLWLPRLMEDNYNVFYSAPLDLDFL
MLETFPCAYKETVPRGPSIPDRVSHPGKYAEKIKSGIIAALKNEKATGHTYLEEQHELMVWYNTLFLGRSKPSTHIEALL
KLDDDDLIMFIPDIFRRLVTRVKEILQKED
>Mature_670_residues
MIISKLHLKNFRSFGDKGTTVKLNKLSGFVGENSAGKTALIHGLVKLFGVTSHERTLEKSDFHIPKQAKVETIKELQLSI
EARIDFPELLETDQENLSRTSIPPFINQLVVRAATEAPYLRVRLIAKWTTDNTPEGEIEQKLYFVTVAEDIDETEEDLVP
VTPHQRSSIQVLYVPAVREPSSQLRNASGTILWRILNNISWPDDINDSIKARMEPVNELFDSIEGVSHIRSVIGEEWKKY
HKDARYQDAKLQFSSSTLSAILKKIEVSFSPTHDLGEYSVEKLGDGLRSLFYLSLVSSLLEAEIKITGKSNASLTVLAVE
EPENHISPHLLGRVMENLKDISGKYNAQVVLTSHSSSIIKRIDPDNLTHLRIDQTSFTTMVKKIILPSKTSEAYTYIKEA
VRAFPEIYFSRLVILGEGDSEEIVIPRVLAANGIHPDDYGISIVPLGGRHVNHMWKLLNELNIPHITLLDLDRERGGGGW
SRIQYAIKQLLLYGRNREELLRISWCGKREEILSDAQVEEMDEYPMTPDWIASMNNLWLPRLMEDNYNVFYSAPLDLDFL
MLETFPCAYKETVPRGPSIPDRVSHPGKYAEKIKSGIIAALKNEKATGHTYLEEQHELMVWYNTLFLGRSKPSTHIEALL
KLDDDDLIMFIPDIFRRLVTRVKEILQKED

Specific function: Unknown

COG id: COG3593

COG function: function code L; Predicted ATP-dependent endonuclease of the OLD family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76209; Mature: 76209

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIISKLHLKNFRSFGDKGTTVKLNKLSGFVGENSAGKTALIHGLVKLFGVTSHERTLEKS
CCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCC
DFHIPKQAKVETIKELQLSIEARIDFPELLETDQENLSRTSIPPFINQLVVRAATEAPYL
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHCCCCHHHHHHHHHHHCCCCEE
RVRLIAKWTTDNTPEGEIEQKLYFVTVAEDIDETEEDLVPVTPHQRSSIQVLYVPAVREP
EEEEEEEECCCCCCCCCCCCEEEEEEEHHHCCCHHHCCCCCCCCCCCCEEEEEECCCCCC
SSQLRNASGTILWRILNNISWPDDINDSIKARMEPVNELFDSIEGVSHIRSVIGEEWKKY
HHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HKDARYQDAKLQFSSSTLSAILKKIEVSFSPTHDLGEYSVEKLGDGLRSLFYLSLVSSLL
HHCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EAEIKITGKSNASLTVLAVEEPENHISPHLLGRVMENLKDISGKYNAQVVLTSHSSSIIK
HCEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHH
RIDPDNLTHLRIDQTSFTTMVKKIILPSKTSEAYTYIKEAVRAFPEIYFSRLVILGEGDS
HCCCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCC
EEIVIPRVLAANGIHPDDYGISIVPLGGRHVNHMWKLLNELNIPHITLLDLDRERGGGGW
CCEEECHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHH
SRIQYAIKQLLLYGRNREELLRISWCGKREEILSDAQVEEMDEYPMTPDWIASMNNLWLP
HHHHHHHHHHHHHCCCHHHEEEEECCCCHHHHHCCCHHHHHHCCCCCHHHHHHHCCCCCC
RLMEDNYNVFYSAPLDLDFLMLETFPCAYKETVPRGPSIPDRVSHPGKYAEKIKSGIIAA
HHHCCCCCEEEECCCCCEEHHHHHCCCHHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHHH
LKNEKATGHTYLEEQHELMVWYNTLFLGRSKPSTHIEALLKLDDDDLIMFIPDIFRRLVT
HCCCCCCCCHHHHCCCCEEEEEEEHEECCCCCHHHHHHHHEECCCCEEEEHHHHHHHHHH
RVKEILQKED
HHHHHHHCCC
>Mature Secondary Structure
MIISKLHLKNFRSFGDKGTTVKLNKLSGFVGENSAGKTALIHGLVKLFGVTSHERTLEKS
CCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCC
DFHIPKQAKVETIKELQLSIEARIDFPELLETDQENLSRTSIPPFINQLVVRAATEAPYL
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHCCCCHHHHHHHHHHHCCCCEE
RVRLIAKWTTDNTPEGEIEQKLYFVTVAEDIDETEEDLVPVTPHQRSSIQVLYVPAVREP
EEEEEEEECCCCCCCCCCCCEEEEEEEHHHCCCHHHCCCCCCCCCCCCEEEEEECCCCCC
SSQLRNASGTILWRILNNISWPDDINDSIKARMEPVNELFDSIEGVSHIRSVIGEEWKKY
HHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HKDARYQDAKLQFSSSTLSAILKKIEVSFSPTHDLGEYSVEKLGDGLRSLFYLSLVSSLL
HHCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EAEIKITGKSNASLTVLAVEEPENHISPHLLGRVMENLKDISGKYNAQVVLTSHSSSIIK
HCEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHH
RIDPDNLTHLRIDQTSFTTMVKKIILPSKTSEAYTYIKEAVRAFPEIYFSRLVILGEGDS
HCCCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCC
EEIVIPRVLAANGIHPDDYGISIVPLGGRHVNHMWKLLNELNIPHITLLDLDRERGGGGW
CCEEECHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHH
SRIQYAIKQLLLYGRNREELLRISWCGKREEILSDAQVEEMDEYPMTPDWIASMNNLWLP
HHHHHHHHHHHHHCCCHHHEEEEECCCCHHHHHCCCHHHHHHCCCCCHHHHHHHCCCCCC
RLMEDNYNVFYSAPLDLDFLMLETFPCAYKETVPRGPSIPDRVSHPGKYAEKIKSGIIAA
HHHCCCCCEEEECCCCCEEHHHHHCCCHHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHHH
LKNEKATGHTYLEEQHELMVWYNTLFLGRSKPSTHIEALLKLDDDDLIMFIPDIFRRLVT
HCCCCCCCCHHHHCCCCEEEEEEEHEECCCCCHHHHHHHHEECCCCEEEEHHHHHHHHHH
RVKEILQKED
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA