Definition Bacillus clausii KSM-K16, complete genome.
Accession NC_006582
Length 4,303,871

Click here to switch to the map view.

The map label for this gene is yerI [H]

Identifier: 56963169

GI number: 56963169

Start: 1511550

End: 1512629

Strand: Direct

Name: yerI [H]

Synonym: ABC1398

Alternate gene names: 56963169

Gene position: 1511550-1512629 (Clockwise)

Preceding gene: 56963167

Following gene: 56963170

Centisome position: 35.12

GC content: 38.7

Gene sequence:

>1080_bases
ATGAGCACAGCATTTCAGGCGGCGGCAAAAACAGCCGAAAAAATGTTAATTCCTAAAATTGTAGAATTATATGAGTTGAA
GGGTTATTCCTTTTCTCAAATTCCCCCTCATGACGGTGGAAGGAATCTGGTGTACACATGCAAAAAGGCAGGAGAAAAGG
AAAAAATAATTAGAATCGGATTTTTAAGCGACAGAAAGAAGGAGGATTTTTTAAGCGAGCTGGAATATGTTCGCTATTTA
TACGATCACGGCGGCAGCGTTTCAAATGTCGTCGACTCCCAAAAAGGGAATCTAGTGGAAGAGATCGCATATGAGAACCA
GACGTTCTTTGTCAGTCTGTTTGAACGAGCCAGAGGGAAGAAGCTCGCAGAAAACCATTATCGTTATCGGGATGGAGCGC
CTATCGCTGAATACTTTTATAATTGCGGTAAAACGCTTGGTAAGCTGCACCACTTATCAAAAGAATATAAACCGGTCCAT
CGGAGGTACGATTTTTTTGATAAATATAATAGAGCATATATTGTTCAATTGCTCCCGGATTCATTATCTCTAGTTAAGGA
AAAACTGTTTCAGCTTCTGAAAACATTGGAGGGGTTGAACAGGAGTTCCGGTCATTATGGCATGGTTCATTTTGATTATA
GTGACGGTAATTATCACGTAGATTTTGAAAATGGAAATATTACTGTTTTTGACTTTGATAACTCTTGCTTCTGTTGGTAT
ATGTACGATTTGGCGAATCTTTGGACGATTGGCGCTGGCTGGATTCGATTTGAAAAAGACAACAGCAAACGCAGGGAATT
TATGGACGATTATTTTGAAAACGTTCTCGACGGTTACCGATCTGAAACGGAAATCGATGATTTTATGCTGGAGCAACTTC
CTTTATTTATTCAAGCGATACTTATGGAAAATATGATAGACGCATTTGAGGTGATGCGAAACAATGGAGAAGAGGCAAAA
TGCGACGAAGAACTGTCGTACCTAATAAAATGCTTGGAAGAAGATATTCCATATAAAGGATTTTTTCATGAAATTTACTC
ATGCGAAGCGCCTTTTGAATATGAAGAACGTAAGATTTAA

Upstream 100 bases:

>100_bases
TACCTTGTTTTAAAAAGGAGTCCGTATTTGTAGAATGTAGAGCGGCATATTTACGTAACATACTTGAAAGCATGGGAAAG
GAAAAAAGGGGGAAAAGCCG

Downstream 100 bases:

>100_bases
GGCGGCGGTTCTGTCTGCTCTGTTTTTTAATGCGTAACCAGGGTATGTGCTCAGATGCGAGGACGAAGCACAGTATGATC
TTTAAGGTGAAATCATCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MSTAFQAAAKTAEKMLIPKIVELYELKGYSFSQIPPHDGGRNLVYTCKKAGEKEKIIRIGFLSDRKKEDFLSELEYVRYL
YDHGGSVSNVVDSQKGNLVEEIAYENQTFFVSLFERARGKKLAENHYRYRDGAPIAEYFYNCGKTLGKLHHLSKEYKPVH
RRYDFFDKYNRAYIVQLLPDSLSLVKEKLFQLLKTLEGLNRSSGHYGMVHFDYSDGNYHVDFENGNITVFDFDNSCFCWY
MYDLANLWTIGAGWIRFEKDNSKRREFMDDYFENVLDGYRSETEIDDFMLEQLPLFIQAILMENMIDAFEVMRNNGEEAK
CDEELSYLIKCLEEDIPYKGFFHEIYSCEAPFEYEERKI

Sequences:

>Translated_359_residues
MSTAFQAAAKTAEKMLIPKIVELYELKGYSFSQIPPHDGGRNLVYTCKKAGEKEKIIRIGFLSDRKKEDFLSELEYVRYL
YDHGGSVSNVVDSQKGNLVEEIAYENQTFFVSLFERARGKKLAENHYRYRDGAPIAEYFYNCGKTLGKLHHLSKEYKPVH
RRYDFFDKYNRAYIVQLLPDSLSLVKEKLFQLLKTLEGLNRSSGHYGMVHFDYSDGNYHVDFENGNITVFDFDNSCFCWY
MYDLANLWTIGAGWIRFEKDNSKRREFMDDYFENVLDGYRSETEIDDFMLEQLPLFIQAILMENMIDAFEVMRNNGEEAK
CDEELSYLIKCLEEDIPYKGFFHEIYSCEAPFEYEERKI
>Mature_358_residues
STAFQAAAKTAEKMLIPKIVELYELKGYSFSQIPPHDGGRNLVYTCKKAGEKEKIIRIGFLSDRKKEDFLSELEYVRYLY
DHGGSVSNVVDSQKGNLVEEIAYENQTFFVSLFERARGKKLAENHYRYRDGAPIAEYFYNCGKTLGKLHHLSKEYKPVHR
RYDFFDKYNRAYIVQLLPDSLSLVKEKLFQLLKTLEGLNRSSGHYGMVHFDYSDGNYHVDFENGNITVFDFDNSCFCWYM
YDLANLWTIGAGWIRFEKDNSKRREFMDDYFENVLDGYRSETEIDDFMLEQLPLFIQAILMENMIDAFEVMRNNGEEAKC
DEELSYLIKCLEEDIPYKGFFHEIYSCEAPFEYEERKI

Specific function: Unknown

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pseudomonas-type thrB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 42307; Mature: 42176

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTAFQAAAKTAEKMLIPKIVELYELKGYSFSQIPPHDGGRNLVYTCKKAGEKEKIIRIG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEE
FLSDRKKEDFLSELEYVRYLYDHGGSVSNVVDSQKGNLVEEIAYENQTFFVSLFERARGK
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHCCC
KLAENHYRYRDGAPIAEYFYNCGKTLGKLHHLSKEYKPVHRRYDFFDKYNRAYIVQLLPD
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCH
SLSLVKEKLFQLLKTLEGLNRSSGHYGMVHFDYSDGNYHVDFENGNITVFDFDNSCFCWY
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEEEECCCEEEEECCCCEEEEE
MYDLANLWTIGAGWIRFEKDNSKRREFMDDYFENVLDGYRSETEIDDFMLEQLPLFIQAI
HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LMENMIDAFEVMRNNGEEAKCDEELSYLIKCLEEDIPYKGFFHEIYSCEAPFEYEERKI
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
STAFQAAAKTAEKMLIPKIVELYELKGYSFSQIPPHDGGRNLVYTCKKAGEKEKIIRIG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEE
FLSDRKKEDFLSELEYVRYLYDHGGSVSNVVDSQKGNLVEEIAYENQTFFVSLFERARGK
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHCCC
KLAENHYRYRDGAPIAEYFYNCGKTLGKLHHLSKEYKPVHRRYDFFDKYNRAYIVQLLPD
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCH
SLSLVKEKLFQLLKTLEGLNRSSGHYGMVHFDYSDGNYHVDFENGNITVFDFDNSCFCWY
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEEEECCCEEEEECCCCEEEEE
MYDLANLWTIGAGWIRFEKDNSKRREFMDDYFENVLDGYRSETEIDDFMLEQLPLFIQAI
HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LMENMIDAFEVMRNNGEEAKCDEELSYLIKCLEEDIPYKGFFHEIYSCEAPFEYEERKI
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9701819; 9384377 [H]