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The map label for this gene is yomR [H]

Identifier: 56963116

GI number: 56963116

Start: 1471589

End: 1473649

Strand: Direct

Name: yomR [H]

Synonym: ABC1344

Alternate gene names: 56963116

Gene position: 1471589-1473649 (Clockwise)

Preceding gene: 56963115

Following gene: 56963117

Centisome position: 34.19

GC content: 47.6

Gene sequence:

>2061_bases
ATGAAGCAGTTTGACAGCCGTCACGATATACGTTTAGTCATCCCACCTGAATATCGGCTGTGGGAAGAAGCGGAAGTGCA
TTTCTTAATGGAAGATGCTTCGCGCAACCTATTAGTCAATGACAAAGCCGACTATGTAAATAAACAAACGGGCGAGGTAG
TCTATCGTTTGAGGGAAGTTGACACGATGAAGCCTGGTTGTCATAGAGCCGTTTTCCGTATTAATTACGGCGATGGCACA
ACGATGAGCTTTCCACAGAAGGGCTATATCGAGGTGCGCATAGAGCGGACGATTCATAACGGACGCGACACGCACATCGT
GGAAGAAATTGCTTTAAAAGTATCGCTGATCGATCAAAAATTTGCTGATCTTGCGGAAGAAGTGGAAGAATGGAGAGAAA
ACGTTGCCGATGACGTGAAAGAAAAGGTCTATGAGAATTTAGATATAGACCGTCTCAGTAACACGGAAGTCATTCAGGCG
CGTGGCGGCAAAAAGGATTTAAACGAGCGGATAACGGGCATCGATGAAGGGCTGAACGCTCATATCGCGGACAAAAAGAA
TCCGCACGGGACCACCAAAAATGATGTCGGCTTGGGAAATGTACCCAATTGGGGGGCAGCTACTCAAGCAGAAGCGCAAG
CGGGGACAAATAACTCTAAGATCATGACTCCGCAGAGGACAAAAGAGGCGATTGACGCTCTTTCATCGATTCATTTGCTC
CCTAAAGGGTCGATACCATCTGATGCAGGCATAGACAGTTATCCTTTTGGAGTCAGTGTCATGCTTGTAGGGGAAGGCGA
GGAAGCGAGAGGCTATCCAGGAACTTGGGGGATTTTGACAACTTTTAAACCTTTGGGGACTAGTGTTTCCTCGTCGCAAG
AGTTCTCCCGAATAACGTCCGATCAAAGTGTCTATAAGAGGACTAGTAACGGTAGCGGTTGGAACGGATTTGTTCAACAA
GAAACCACATCGGGCGCACAATCTAAAGTAAATGCTCACGCTAACAATAAGAATAATCCGCATGATGTTACTAAGAGCCA
AATTGGATTAGGAAATGTTCCCAATTGGGGTGCGGCGAGTCAAGCGGACGCGAGGGCAGGAACAAACAATACAAGAATGA
TGTCTCCTCTAAGAACAAAGGAGGCAATTGATGCTTTTGCGAGCGAAGCAACGATTATTCCTGCTAAATCAGCAAATGTA
TCAGGGGTAGATTATCCGCTTGGCTTAACGACGTTTATGCATTCAGGGCTAGGCTACCCTACTGACCACGGGACGATCTT
TAATATAAAAGTCTCTAACTTGCGGTTTACGCAATTATATTTTCCTCATGCAATTCGTCACGAGGAAATTGGTATGTACT
TTAGACACTTTTACGAAGGGGACGGCTGGACTGACTTTCAGCAAGTAGAGACAACTTCCGGCGCCCAAGCAAAGGTAGAC
GCGCACGCCAACAACAAGGGCAATCCGCACGGTGTCACAAAAGCGCAAGTCGGTCTTTCCAATGTTGATAACGCCAAGCA
AGCGACAAAGGTTGAGTTTGATGCACATGTAAACAATAAAAGCAATCCACACGGAGTAACTAAAAGTCAGGTCGGTTTGG
GGAGTGTGCCGAACTATCCCGTATCCAGCCAAGCACAAGCGGAAGCGGGTACCCACACAGCCAGCTTTATGACGCCACAG
CGTACCAAGCAAGCTTTCCAGTCATTTTCAAACGAACCGCTTAACTGGATTAGAGCAAGCTTACAATCGACGTGGACCCA
CTCAAGTAGCTGGCCTGTCAGGTACGCGAAAGATTCAACAGGAACCGTCTATATCGAAGGCAGCATGAACGGTGGCGCAA
TTGGTGGCGACCCTGCGGTTGTGCAGTTTATTCTGCCGCCTGGATATAGGCCAGGACAAACTAGCTACTTTTGGCTAGTA
GGCAGCTCAGCAGGGACGTCGGGCGCCCAAGGCTTACGGTGCTACCTGGGAGCAAACGGTAACTTTATTATTCAGGACAT
GACTTGGCCGGGAGCTACGCAATTTGTAGCAGTTAACATCGTCTTTAAGGCAGGCAATTAA

Upstream 100 bases:

>100_bases
ACGACGAGGGCCAATTTATTGTGATGAACATTACGACACCATATAGCGAGGAAAAAGGTTACGGTGTTGCAGTTGTCTTC
ATTCGGTAGGGGGGTATAAG

Downstream 100 bases:

>100_bases
GGAGGGAAGTATGAGACAGTTTTATAGGATAGATGATGACGGCTACTACATTGAGCCTATTGTCTTAGAGGCGGTCGAAA
ATCCAAAGGGCGACACATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 686; Mature: 686

Protein sequence:

>686_residues
MKQFDSRHDIRLVIPPEYRLWEEAEVHFLMEDASRNLLVNDKADYVNKQTGEVVYRLREVDTMKPGCHRAVFRINYGDGT
TMSFPQKGYIEVRIERTIHNGRDTHIVEEIALKVSLIDQKFADLAEEVEEWRENVADDVKEKVYENLDIDRLSNTEVIQA
RGGKKDLNERITGIDEGLNAHIADKKNPHGTTKNDVGLGNVPNWGAATQAEAQAGTNNSKIMTPQRTKEAIDALSSIHLL
PKGSIPSDAGIDSYPFGVSVMLVGEGEEARGYPGTWGILTTFKPLGTSVSSSQEFSRITSDQSVYKRTSNGSGWNGFVQQ
ETTSGAQSKVNAHANNKNNPHDVTKSQIGLGNVPNWGAASQADARAGTNNTRMMSPLRTKEAIDAFASEATIIPAKSANV
SGVDYPLGLTTFMHSGLGYPTDHGTIFNIKVSNLRFTQLYFPHAIRHEEIGMYFRHFYEGDGWTDFQQVETTSGAQAKVD
AHANNKGNPHGVTKAQVGLSNVDNAKQATKVEFDAHVNNKSNPHGVTKSQVGLGSVPNYPVSSQAQAEAGTHTASFMTPQ
RTKQAFQSFSNEPLNWIRASLQSTWTHSSSWPVRYAKDSTGTVYIEGSMNGGAIGGDPAVVQFILPPGYRPGQTSYFWLV
GSSAGTSGAQGLRCYLGANGNFIIQDMTWPGATQFVAVNIVFKAGN

Sequences:

>Translated_686_residues
MKQFDSRHDIRLVIPPEYRLWEEAEVHFLMEDASRNLLVNDKADYVNKQTGEVVYRLREVDTMKPGCHRAVFRINYGDGT
TMSFPQKGYIEVRIERTIHNGRDTHIVEEIALKVSLIDQKFADLAEEVEEWRENVADDVKEKVYENLDIDRLSNTEVIQA
RGGKKDLNERITGIDEGLNAHIADKKNPHGTTKNDVGLGNVPNWGAATQAEAQAGTNNSKIMTPQRTKEAIDALSSIHLL
PKGSIPSDAGIDSYPFGVSVMLVGEGEEARGYPGTWGILTTFKPLGTSVSSSQEFSRITSDQSVYKRTSNGSGWNGFVQQ
ETTSGAQSKVNAHANNKNNPHDVTKSQIGLGNVPNWGAASQADARAGTNNTRMMSPLRTKEAIDAFASEATIIPAKSANV
SGVDYPLGLTTFMHSGLGYPTDHGTIFNIKVSNLRFTQLYFPHAIRHEEIGMYFRHFYEGDGWTDFQQVETTSGAQAKVD
AHANNKGNPHGVTKAQVGLSNVDNAKQATKVEFDAHVNNKSNPHGVTKSQVGLGSVPNYPVSSQAQAEAGTHTASFMTPQ
RTKQAFQSFSNEPLNWIRASLQSTWTHSSSWPVRYAKDSTGTVYIEGSMNGGAIGGDPAVVQFILPPGYRPGQTSYFWLV
GSSAGTSGAQGLRCYLGANGNFIIQDMTWPGATQFVAVNIVFKAGN
>Mature_686_residues
MKQFDSRHDIRLVIPPEYRLWEEAEVHFLMEDASRNLLVNDKADYVNKQTGEVVYRLREVDTMKPGCHRAVFRINYGDGT
TMSFPQKGYIEVRIERTIHNGRDTHIVEEIALKVSLIDQKFADLAEEVEEWRENVADDVKEKVYENLDIDRLSNTEVIQA
RGGKKDLNERITGIDEGLNAHIADKKNPHGTTKNDVGLGNVPNWGAATQAEAQAGTNNSKIMTPQRTKEAIDALSSIHLL
PKGSIPSDAGIDSYPFGVSVMLVGEGEEARGYPGTWGILTTFKPLGTSVSSSQEFSRITSDQSVYKRTSNGSGWNGFVQQ
ETTSGAQSKVNAHANNKNNPHDVTKSQIGLGNVPNWGAASQADARAGTNNTRMMSPLRTKEAIDAFASEATIIPAKSANV
SGVDYPLGLTTFMHSGLGYPTDHGTIFNIKVSNLRFTQLYFPHAIRHEEIGMYFRHFYEGDGWTDFQQVETTSGAQAKVD
AHANNKGNPHGVTKAQVGLSNVDNAKQATKVEFDAHVNNKSNPHGVTKSQVGLGSVPNYPVSSQAQAEAGTHTASFMTPQ
RTKQAFQSFSNEPLNWIRASLQSTWTHSSSWPVRYAKDSTGTVYIEGSMNGGAIGGDPAVVQFILPPGYRPGQTSYFWLV
GSSAGTSGAQGLRCYLGANGNFIIQDMTWPGATQFVAVNIVFKAGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74978; Mature: 74978

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQFDSRHDIRLVIPPEYRLWEEAEVHFLMEDASRNLLVNDKADYVNKQTGEVVYRLREV
CCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEECCHHHHCCHHHHHHHHHHHH
DTMKPGCHRAVFRINYGDGTTMSFPQKGYIEVRIERTIHNGRDTHIVEEIALKVSLIDQK
CCCCCCCCEEEEEEECCCCCEECCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHH
FADLAEEVEEWRENVADDVKEKVYENLDIDRLSNTEVIQARGGKKDLNERITGIDEGLNA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHCHHCCCCE
HIADKKNPHGTTKNDVGLGNVPNWGAATQAEAQAGTNNSKIMTPQRTKEAIDALSSIHLL
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEECCHHHHHHHHHHHHEEEC
PKGSIPSDAGIDSYPFGVSVMLVGEGEEARGYPGTWGILTTFKPLGTSVSSSQEFSRITS
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHEECHHCCCCCCCHHHHHHHCC
DQSVYKRTSNGSGWNGFVQQETTSGAQSKVNAHANNKNNPHDVTKSQIGLGNVPNWGAAS
CHHHHHCCCCCCCCCCEEECCCCCCHHHHEEECCCCCCCCCHHHHHHCCCCCCCCCCCCC
QADARAGTNNTRMMSPLRTKEAIDAFASEATIIPAKSANVSGVDYPLGLTTFMHSGLGYP
CCCCCCCCCCCEEECCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCC
TDHGTIFNIKVSNLRFTQLYFPHAIRHEEIGMYFRHFYEGDGWTDFQQVETTSGAQAKVD
CCCCEEEEEEECCEEEEEEECCHHHCHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCEEEE
AHANNKGNPHGVTKAQVGLSNVDNAKQATKVEFDAHVNNKSNPHGVTKSQVGLGSVPNYP
ECCCCCCCCCCCEEECCCCCCCCCCHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
VSSQAQAEAGTHTASFMTPQRTKQAFQSFSNEPLNWIRASLQSTWTHSSSWPVRYAKDST
CCCCCHHHCCCCHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEECCCC
GTVYIEGSMNGGAIGGDPAVVQFILPPGYRPGQTSYFWLVGSSAGTSGAQGLRCYLGANG
CEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCC
NFIIQDMTWPGATQFVAVNIVFKAGN
CEEEEECCCCCCCEEEEEEEEEECCC
>Mature Secondary Structure
MKQFDSRHDIRLVIPPEYRLWEEAEVHFLMEDASRNLLVNDKADYVNKQTGEVVYRLREV
CCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEECCHHHHCCHHHHHHHHHHHH
DTMKPGCHRAVFRINYGDGTTMSFPQKGYIEVRIERTIHNGRDTHIVEEIALKVSLIDQK
CCCCCCCCEEEEEEECCCCCEECCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHH
FADLAEEVEEWRENVADDVKEKVYENLDIDRLSNTEVIQARGGKKDLNERITGIDEGLNA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHCHHCCCCE
HIADKKNPHGTTKNDVGLGNVPNWGAATQAEAQAGTNNSKIMTPQRTKEAIDALSSIHLL
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEECCHHHHHHHHHHHHEEEC
PKGSIPSDAGIDSYPFGVSVMLVGEGEEARGYPGTWGILTTFKPLGTSVSSSQEFSRITS
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHEECHHCCCCCCCHHHHHHHCC
DQSVYKRTSNGSGWNGFVQQETTSGAQSKVNAHANNKNNPHDVTKSQIGLGNVPNWGAAS
CHHHHHCCCCCCCCCCEEECCCCCCHHHHEEECCCCCCCCCHHHHHHCCCCCCCCCCCCC
QADARAGTNNTRMMSPLRTKEAIDAFASEATIIPAKSANVSGVDYPLGLTTFMHSGLGYP
CCCCCCCCCCCEEECCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCC
TDHGTIFNIKVSNLRFTQLYFPHAIRHEEIGMYFRHFYEGDGWTDFQQVETTSGAQAKVD
CCCCEEEEEEECCEEEEEEECCHHHCHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCEEEE
AHANNKGNPHGVTKAQVGLSNVDNAKQATKVEFDAHVNNKSNPHGVTKSQVGLGSVPNYP
ECCCCCCCCCCCEEECCCCCCCCCCHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
VSSQAQAEAGTHTASFMTPQRTKQAFQSFSNEPLNWIRASLQSTWTHSSSWPVRYAKDST
CCCCCHHHCCCCHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEECCCC
GTVYIEGSMNGGAIGGDPAVVQFILPPGYRPGQTSYFWLVGSSAGTSGAQGLRCYLGANG
CEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCC
NFIIQDMTWPGATQFVAVNIVFKAGN
CEEEEECCCCCCCEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]