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The map label for this gene is yobO [H]

Identifier: 56963115

GI number: 56963115

Start: 1468923

End: 1471577

Strand: Direct

Name: yobO [H]

Synonym: ABC1343

Alternate gene names: 56963115

Gene position: 1468923-1471577 (Clockwise)

Preceding gene: 56963114

Following gene: 56963116

Centisome position: 34.13

GC content: 46.97

Gene sequence:

>2655_bases
GTGAATGATTATAATGCGCAGATCAATAGTGAAATTTATAAGCGTTTAGTTGAAATTAGTGATCTGAAAAACTTAGCAGC
AACAGCGAAATACCGCTCATTGCGTGCCGAAGAGCTGGCTCGCATTGCCGAAATGGAATCAAAGATCACGCGTAAGCAAG
TGTTGGCAGCGCTTGAAGCAGGGGATCAACTAGAAGAAGTGAAAATGCTTCGGGTTGATCCAGCAACGGGAGAAAAATTT
GATACGGCTGCTGATATGTTCGCAGCATACCAGCGAAGAACGAAAGAAAAAATCGACCATATGCAGGCGCAAATATTGCG
AGAAGTGCATGTCGATGATTATGGGGCCGTACCAGACGGTGTGACCGATTCAACCGAAGCGTTTAAAAGGGCGCTTGGAG
ACGGCAATGTAAAGGTGCATATGTCGGCTGGTACGTATCGTGTAAGTGAAATTCAGATGCCGTCTAACTCGATTTTGATA
GGGCAGGGCATTGACGTCACAAACATTAAACTTATTGATGATGCGCCAGTCGCTTCTTTTGTCGTAACCAACGCTGACCA
AGTGAGTGGTAAGTCTGAAAACATTCATCTGTATGATTTCACAGCCGATTGGAATGCATCACGCTACCCTGTCGAGGGCA
GGCCGTCAGCCGCAGGGGGCTATAAATCAAGCGGCATCGTGTTTGCCGGAGCTAAATTTTCATCGGCAACACGAGTAAAA
GCCAAGGATTGTTTGCTACATTGCTTTGACATAACGGCAGGTAACAAAGATCAGGTGTATTTTTACGACGGCGATAAGGT
TATGGACGTTAACCCGCAATCTAAAAACCCGTCCGAATACATCATGCTTACGGACTGTATTGCAGATGGTCACGGGGATG
ACGGCTTTACGACGCACCATAGTAATTACCTTTTTATTGAGGGCTGCTTTTCAACTGGCGCGACCAACTATTTGGACATC
GGCCATAAAAACAGCAATGGCTTTGAGATGGATGACGGTTCACGCTTTGTATTTGTTAGCCGATGCGTGTCTAAGGAAAA
TACGCGCGGCTATGAGGTAAAAGGACATGACTATTCTTTGGCTGGCGCAAACATTCATTTAACCGACTGTTTAGATATTG
GTTCAGTCATTTCTTTCAATTACAGGCACATGGGCCACTATGGCAGCGAGGGACAAGAGCCATCCGTTTCCGCAAAAGAC
ATTACAATGACCAATTGCGTATCCCTATTCCCACAACGCAGATCATGGGGAGGGGACACAGACCCGCGCGCGCTGTTTGT
ATCGTCCTATATGGGCGTTAACATTCAAGGCTTTGAGGCAATCGGCGACGAGAATTTTGACGGCGAATTTGTCATTGAGT
TTGCGCGTGAAAGTGGACAATACAACCTAAACAACGTCATTATTCGCGGTTTTACTAAAGCCACTTATGACCTGATGGTA
CGCGGCGGCGGTCGTCGTGTGGATAGCGTCAACGTATCAAATTTCATAGTGCGCGATTCAGCTAAAAACGGCATATACGT
AGGCGGTTCGGGCTTAGAAAACGCCCACCTAGTCAACATCCAACTACACGGCCGTAACGTAGCTGACTCAGTAGGTATTA
CACTAGCAAACAACCAAACATCTGTATTGCTTGCATATGCAGACCGATACGCTAAAGCGGGTAGCATTGCAGGTGAGTTG
ATAAACGACTTTCCAAATCTAATGCGACAAAACACAAAAATTTCGTCCGGTGCAGGCATTCCGAGAGGTTCAAACACTTC
GCTTATTTCGACATCTGGCGGAGCAACAACGAGCGAAGACGGGTTTAACAATGTTGGCATAGGTAGTTCTGGCGGCCCGC
ATGTCTCAGGTAGCAACTCCTTTGTTTTAGGCACGTCGCAAGGCTCGCGAGCAACAGGCGACCGCTCAGGAGTAATCGGC
TCACAAAACTCGCGTGCTCAAGGTACAGCTTCGTTAGTGCTTGCATCTGGCTCAGTATTAAATAACGAAAACTACTGCAT
ATCGATGGGAGCTGGCAACGGTGACCCGTCCACACGTAACGCAAAAATTAAGATGTACACGGCTCAAGGTAACTTGCGGT
ATACGGGTACCAGTGAGGGCGGCAGCACGTTTAGCGACTACGCCGAGTATTTTGAGAGCCACGACGGTCAAAAAATTGAT
ACTGGCTACTTGGTGTCGCTCGTAGGCAACAAAATTAAAAAAGCTGACAAAGGCGAGGAAATTATAGGGGCTATATCTGA
GACAGCCGGAACGGTACTAGGTTCGGCTGCTTTTTCATGGCAAGACCGTTACTTGAAAAATGAATTTGGTGGCTACATTT
ACGAGAAAAAAGCACTTAGGGAGTACGATCTGGACGAAGACGGAAACCAGCTAGACACATACAAAGAGGTCTTGGTCGAT
ATGCCGAAAGAAAATCCAGACTATGACCCGCAAAGAGAGTATGAGCCACGCGAAGATCGTGACGAATGGCACATTGTCGG
TCTGGTTGGGCAAGTACATGTCCGCATAGACAACACGGTAGAAGCGGGCGATAAAATTAGCGCGATAGGTGGAATTGCGA
CTAAGGACGACGAGGGCCAATTTATTGTGATGAACATTACGACACCATATAGCGAGGAAAAAGGTTACGGTGTTGCAGTT
GTCTTCATTCGGTAG

Upstream 100 bases:

>100_bases
GACCAAACGAATTTATTTTGTCAGGGACAAGCGGACCATTTGAGATCGGTTTCGACTTCCAATTTTTATTTATCTAGTGA
ACTAGCAAGGAGGGAAGCAA

Downstream 100 bases:

>100_bases
GGGGGTATAAGATGAAGCAGTTTGACAGCCGTCACGATATACGTTTAGTCATCCCACCTGAATATCGGCTGTGGGAAGAA
GCGGAAGTGCATTTCTTAAT

Product: phage-related pre-neck appendage protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 884; Mature: 884

Protein sequence:

>884_residues
MNDYNAQINSEIYKRLVEISDLKNLAATAKYRSLRAEELARIAEMESKITRKQVLAALEAGDQLEEVKMLRVDPATGEKF
DTAADMFAAYQRRTKEKIDHMQAQILREVHVDDYGAVPDGVTDSTEAFKRALGDGNVKVHMSAGTYRVSEIQMPSNSILI
GQGIDVTNIKLIDDAPVASFVVTNADQVSGKSENIHLYDFTADWNASRYPVEGRPSAAGGYKSSGIVFAGAKFSSATRVK
AKDCLLHCFDITAGNKDQVYFYDGDKVMDVNPQSKNPSEYIMLTDCIADGHGDDGFTTHHSNYLFIEGCFSTGATNYLDI
GHKNSNGFEMDDGSRFVFVSRCVSKENTRGYEVKGHDYSLAGANIHLTDCLDIGSVISFNYRHMGHYGSEGQEPSVSAKD
ITMTNCVSLFPQRRSWGGDTDPRALFVSSYMGVNIQGFEAIGDENFDGEFVIEFARESGQYNLNNVIIRGFTKATYDLMV
RGGGRRVDSVNVSNFIVRDSAKNGIYVGGSGLENAHLVNIQLHGRNVADSVGITLANNQTSVLLAYADRYAKAGSIAGEL
INDFPNLMRQNTKISSGAGIPRGSNTSLISTSGGATTSEDGFNNVGIGSSGGPHVSGSNSFVLGTSQGSRATGDRSGVIG
SQNSRAQGTASLVLASGSVLNNENYCISMGAGNGDPSTRNAKIKMYTAQGNLRYTGTSEGGSTFSDYAEYFESHDGQKID
TGYLVSLVGNKIKKADKGEEIIGAISETAGTVLGSAAFSWQDRYLKNEFGGYIYEKKALREYDLDEDGNQLDTYKEVLVD
MPKENPDYDPQREYEPREDRDEWHIVGLVGQVHVRIDNTVEAGDKISAIGGIATKDDEGQFIVMNITTPYSEEKGYGVAV
VFIR

Sequences:

>Translated_884_residues
MNDYNAQINSEIYKRLVEISDLKNLAATAKYRSLRAEELARIAEMESKITRKQVLAALEAGDQLEEVKMLRVDPATGEKF
DTAADMFAAYQRRTKEKIDHMQAQILREVHVDDYGAVPDGVTDSTEAFKRALGDGNVKVHMSAGTYRVSEIQMPSNSILI
GQGIDVTNIKLIDDAPVASFVVTNADQVSGKSENIHLYDFTADWNASRYPVEGRPSAAGGYKSSGIVFAGAKFSSATRVK
AKDCLLHCFDITAGNKDQVYFYDGDKVMDVNPQSKNPSEYIMLTDCIADGHGDDGFTTHHSNYLFIEGCFSTGATNYLDI
GHKNSNGFEMDDGSRFVFVSRCVSKENTRGYEVKGHDYSLAGANIHLTDCLDIGSVISFNYRHMGHYGSEGQEPSVSAKD
ITMTNCVSLFPQRRSWGGDTDPRALFVSSYMGVNIQGFEAIGDENFDGEFVIEFARESGQYNLNNVIIRGFTKATYDLMV
RGGGRRVDSVNVSNFIVRDSAKNGIYVGGSGLENAHLVNIQLHGRNVADSVGITLANNQTSVLLAYADRYAKAGSIAGEL
INDFPNLMRQNTKISSGAGIPRGSNTSLISTSGGATTSEDGFNNVGIGSSGGPHVSGSNSFVLGTSQGSRATGDRSGVIG
SQNSRAQGTASLVLASGSVLNNENYCISMGAGNGDPSTRNAKIKMYTAQGNLRYTGTSEGGSTFSDYAEYFESHDGQKID
TGYLVSLVGNKIKKADKGEEIIGAISETAGTVLGSAAFSWQDRYLKNEFGGYIYEKKALREYDLDEDGNQLDTYKEVLVD
MPKENPDYDPQREYEPREDRDEWHIVGLVGQVHVRIDNTVEAGDKISAIGGIATKDDEGQFIVMNITTPYSEEKGYGVAV
VFIR
>Mature_884_residues
MNDYNAQINSEIYKRLVEISDLKNLAATAKYRSLRAEELARIAEMESKITRKQVLAALEAGDQLEEVKMLRVDPATGEKF
DTAADMFAAYQRRTKEKIDHMQAQILREVHVDDYGAVPDGVTDSTEAFKRALGDGNVKVHMSAGTYRVSEIQMPSNSILI
GQGIDVTNIKLIDDAPVASFVVTNADQVSGKSENIHLYDFTADWNASRYPVEGRPSAAGGYKSSGIVFAGAKFSSATRVK
AKDCLLHCFDITAGNKDQVYFYDGDKVMDVNPQSKNPSEYIMLTDCIADGHGDDGFTTHHSNYLFIEGCFSTGATNYLDI
GHKNSNGFEMDDGSRFVFVSRCVSKENTRGYEVKGHDYSLAGANIHLTDCLDIGSVISFNYRHMGHYGSEGQEPSVSAKD
ITMTNCVSLFPQRRSWGGDTDPRALFVSSYMGVNIQGFEAIGDENFDGEFVIEFARESGQYNLNNVIIRGFTKATYDLMV
RGGGRRVDSVNVSNFIVRDSAKNGIYVGGSGLENAHLVNIQLHGRNVADSVGITLANNQTSVLLAYADRYAKAGSIAGEL
INDFPNLMRQNTKISSGAGIPRGSNTSLISTSGGATTSEDGFNNVGIGSSGGPHVSGSNSFVLGTSQGSRATGDRSGVIG
SQNSRAQGTASLVLASGSVLNNENYCISMGAGNGDPSTRNAKIKMYTAQGNLRYTGTSEGGSTFSDYAEYFESHDGQKID
TGYLVSLVGNKIKKADKGEEIIGAISETAGTVLGSAAFSWQDRYLKNEFGGYIYEKKALREYDLDEDGNQLDTYKEVLVD
MPKENPDYDPQREYEPREDRDEWHIVGLVGQVHVRIDNTVEAGDKISAIGGIATKDDEGQFIVMNITTPYSEEKGYGVAV
VFIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 6 PbH1 repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021865
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF11962 DUF3476 [H]

EC number: NA

Molecular weight: Translated: 96073; Mature: 96073

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDYNAQINSEIYKRLVEISDLKNLAATAKYRSLRAEELARIAEMESKITRKQVLAALEA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GDQLEEVKMLRVDPATGEKFDTAADMFAAYQRRTKEKIDHMQAQILREVHVDDYGAVPDG
CCCHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
VTDSTEAFKRALGDGNVKVHMSAGTYRVSEIQMPSNSILIGQGIDVTNIKLIDDAPVASF
CCCHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCEEEECCCCEEEEEEECCCCCEEE
VVTNADQVSGKSENIHLYDFTADWNASRYPVEGRPSAAGGYKSSGIVFAGAKFSSATRVK
EEECCHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEE
AKDCLLHCFDITAGNKDQVYFYDGDKVMDVNPQSKNPSEYIMLTDCIADGHGDDGFTTHH
HHHHEEEEEEECCCCCCEEEEECCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCCEEEC
SNYLFIEGCFSTGATNYLDIGHKNSNGFEMDDGSRFVFVSRCVSKENTRGYEVKGHDYSL
CCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEEHHCCCCCCCEEECCCCEEE
AGANIHLTDCLDIGSVISFNYRHMGHYGSEGQEPSVSAKDITMTNCVSLFPQRRSWGGDT
ECCEEEEEHHHCCCHHHEECHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC
DPRALFVSSYMGVNIQGFEAIGDENFDGEFVIEFARESGQYNLNNVIIRGFTKATYDLMV
CCCEEEEEHHCCCCEECCCCCCCCCCCCCEEEEEECCCCCEECCEEEEEEECCCEEEEEE
RGGGRRVDSVNVSNFIVRDSAKNGIYVGGSGLENAHLVNIQLHGRNVADSVGITLANNQT
ECCCCEEEEECCCEEEEEECCCCCEEECCCCCCCEEEEEEEECCCCCCCCCCEEEECCCC
SVLLAYADRYAKAGSIAGELINDFPNLMRQNTKISSGAGIPRGSNTSLISTSGGATTSED
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
GFNNVGIGSSGGPHVSGSNSFVLGTSQGSRATGDRSGVIGSQNSRAQGTASLVLASGSVL
CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEE
NNENYCISMGAGNGDPSTRNAKIKMYTAQGNLRYTGTSEGGSTFSDYAEYFESHDGQKID
CCCCEEEEECCCCCCCCCCCEEEEEEEECCCEEEECCCCCCCCHHHHHHHHHCCCCCEEC
TGYLVSLVGNKIKKADKGEEIIGAISETAGTVLGSAAFSWQDRYLKNEFGGYIYEKKALR
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEECHHHH
EYDLDEDGNQLDTYKEVLVDMPKENPDYDPQREYEPREDRDEWHIVGLVGQVHVRIDNTV
HCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCC
EAGDKISAIGGIATKDDEGQFIVMNITTPYSEEKGYGVAVVFIR
CCCCCEEECCCEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MNDYNAQINSEIYKRLVEISDLKNLAATAKYRSLRAEELARIAEMESKITRKQVLAALEA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GDQLEEVKMLRVDPATGEKFDTAADMFAAYQRRTKEKIDHMQAQILREVHVDDYGAVPDG
CCCHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
VTDSTEAFKRALGDGNVKVHMSAGTYRVSEIQMPSNSILIGQGIDVTNIKLIDDAPVASF
CCCHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCEEEECCCCEEEEEEECCCCCEEE
VVTNADQVSGKSENIHLYDFTADWNASRYPVEGRPSAAGGYKSSGIVFAGAKFSSATRVK
EEECCHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEE
AKDCLLHCFDITAGNKDQVYFYDGDKVMDVNPQSKNPSEYIMLTDCIADGHGDDGFTTHH
HHHHEEEEEEECCCCCCEEEEECCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCCEEEC
SNYLFIEGCFSTGATNYLDIGHKNSNGFEMDDGSRFVFVSRCVSKENTRGYEVKGHDYSL
CCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEEHHCCCCCCCEEECCCCEEE
AGANIHLTDCLDIGSVISFNYRHMGHYGSEGQEPSVSAKDITMTNCVSLFPQRRSWGGDT
ECCEEEEEHHHCCCHHHEECHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC
DPRALFVSSYMGVNIQGFEAIGDENFDGEFVIEFARESGQYNLNNVIIRGFTKATYDLMV
CCCEEEEEHHCCCCEECCCCCCCCCCCCCEEEEEECCCCCEECCEEEEEEECCCEEEEEE
RGGGRRVDSVNVSNFIVRDSAKNGIYVGGSGLENAHLVNIQLHGRNVADSVGITLANNQT
ECCCCEEEEECCCEEEEEECCCCCEEECCCCCCCEEEEEEEECCCCCCCCCCEEEECCCC
SVLLAYADRYAKAGSIAGELINDFPNLMRQNTKISSGAGIPRGSNTSLISTSGGATTSED
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
GFNNVGIGSSGGPHVSGSNSFVLGTSQGSRATGDRSGVIGSQNSRAQGTASLVLASGSVL
CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEE
NNENYCISMGAGNGDPSTRNAKIKMYTAQGNLRYTGTSEGGSTFSDYAEYFESHDGQKID
CCCCEEEEECCCCCCCCCCCEEEEEEEECCCEEEECCCCCCCCHHHHHHHHHCCCCCEEC
TGYLVSLVGNKIKKADKGEEIIGAISETAGTVLGSAAFSWQDRYLKNEFGGYIYEKKALR
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEECHHHH
EYDLDEDGNQLDTYKEVLVDMPKENPDYDPQREYEPREDRDEWHIVGLVGQVHVRIDNTV
HCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCC
EAGDKISAIGGIATKDDEGQFIVMNITTPYSEEKGYGVAVVFIR
CCCCCEEECCCEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]