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The map label for this gene is 56963100

Identifier: 56963100

GI number: 56963100

Start: 1454536

End: 1455012

Strand: Direct

Name: 56963100

Synonym: ABC1328

Alternate gene names: NA

Gene position: 1454536-1455012 (Clockwise)

Preceding gene: 56963099

Following gene: 56963101

Centisome position: 33.8

GC content: 38.57

Gene sequence:

>477_bases
ATGGGTAGAAATGCAAAGCCAATCGATTTGCACCTGGTAGGCGGCAACAAAAGCCGAAAAACAAAGAAAGAAATTGAACA
GAGAAAAAAAGGGGAAGAACAAGTTTCCTTTAAGTCAGATAATGTCGTGGTTCCTGATTGGTTAAGTGATCGAGGAAAAG
AAATTTTCAAACAACTGCTTGATGAATTTAAGTATACACAACTTTTAGCGAATGTCGATACCCATTTACTCGGCTTCTTT
TGCGATGCTATGGATGATTATATAAATATCAGCAAACTTATCAGGCAAAAAGGTTATTTAGATGGAGAAGGGAACGCAAA
TCAACTTCTCACTAAGAAAAAACATGTTTTTGACCAAGCTATGAAGGTAGCAAGCCAATTCGGTCTGTCTCCTTCGGATA
GGGCGAAAATCGCAATGAATATCGTTACAAAGGAAGTCGAACAGGATGATGGTGGGTCATTCAGTGGTCGTATATGA

Upstream 100 bases:

>100_bases
ATCCCAGCACCGCTCGGCCCGCCTTTTTCGTACAAAATTCGTTTTATTATATTTTTCTGTATGTAAATAATTTCCATTTT
AGCCGGAAAGGAGTGATTTT

Downstream 100 bases:

>100_bases
CACTTTTAGAACGGGTTTATCAATACTCAGTAGATGTTTTGGAAGGCAAAGTCATTGCTTGTAAAAAACACAAACAAGCA
GTTGAACGCTTTTTAAAGGA

Product: phage terminase-like protein small subunit

Products: NA

Alternate protein names: Phage Terminase-Like Protein Small Subunit; P27 Family Phage Terminase Small Subunit; Phage Terminase; Phage Terminase Like Small Subunit Protein; Bacteriophage Terminase Small Subunit

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MGRNAKPIDLHLVGGNKSRKTKKEIEQRKKGEEQVSFKSDNVVVPDWLSDRGKEIFKQLLDEFKYTQLLANVDTHLLGFF
CDAMDDYINISKLIRQKGYLDGEGNANQLLTKKKHVFDQAMKVASQFGLSPSDRAKIAMNIVTKEVEQDDGGSFSGRI

Sequences:

>Translated_158_residues
MGRNAKPIDLHLVGGNKSRKTKKEIEQRKKGEEQVSFKSDNVVVPDWLSDRGKEIFKQLLDEFKYTQLLANVDTHLLGFF
CDAMDDYINISKLIRQKGYLDGEGNANQLLTKKKHVFDQAMKVASQFGLSPSDRAKIAMNIVTKEVEQDDGGSFSGRI
>Mature_157_residues
GRNAKPIDLHLVGGNKSRKTKKEIEQRKKGEEQVSFKSDNVVVPDWLSDRGKEIFKQLLDEFKYTQLLANVDTHLLGFFC
DAMDDYINISKLIRQKGYLDGEGNANQLLTKKKHVFDQAMKVASQFGLSPSDRAKIAMNIVTKEVEQDDGGSFSGRI

Specific function: Unknown

COG id: COG3747

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17851; Mature: 17719

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRNAKPIDLHLVGGNKSRKTKKEIEQRKKGEEQVSFKSDNVVVPDWLSDRGKEIFKQLL
CCCCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHCCCCCCCEECCHHHHHHHHHHHHHHH
DEFKYTQLLANVDTHLLGFFCDAMDDYINISKLIRQKGYLDGEGNANQLLTKKKHVFDQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
MKVASQFGLSPSDRAKIAMNIVTKEVEQDDGGSFSGRI
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
GRNAKPIDLHLVGGNKSRKTKKEIEQRKKGEEQVSFKSDNVVVPDWLSDRGKEIFKQLL
CCCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHCCCCCCCEECCHHHHHHHHHHHHHHH
DEFKYTQLLANVDTHLLGFFCDAMDDYINISKLIRQKGYLDGEGNANQLLTKKKHVFDQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
MKVASQFGLSPSDRAKIAMNIVTKEVEQDDGGSFSGRI
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA