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The map label for this gene is ymfN [H]

Identifier: 56963101

GI number: 56963101

Start: 1455009

End: 1456703

Strand: Direct

Name: ymfN [H]

Synonym: ABC1329

Alternate gene names: 56963101

Gene position: 1455009-1456703 (Clockwise)

Preceding gene: 56963100

Following gene: 56963102

Centisome position: 33.81

GC content: 38.35

Gene sequence:

>1695_bases
ATGACACTTTTAGAACGGGTTTATCAATACTCAGTAGATGTTTTGGAAGGCAAAGTCATTGCTTGTAAAAAACACAAACA
AGCAGTTGAACGCTTTTTAAAGGATTTAGAGCGGTCCATTTATGATGAGGACTGCTATTTTTATTTTGATAACAACGAAC
TTGAAGAATTTAACGAATGGGCTTCTTTGTTCAGACACACAAAAGGCGTGCTGGCTGGACAACGAATAGAGCTTACTGAT
TTCCAACTATTTATTGCAGCTAATATCTTTTGTTTTAAACGTAAGGACAATGATTATCGTAAGATTTCTAGTGTTTATAT
TCAACTAGCAAGGAAAAATGCAAAGTCTCAATTACTTGCTATTATAAGTTCCTATGTTGCGTTCTTATCCGATCAAGTGG
AAGAAGTATATATTTCTGGTTGGATGAAAGAACAGTCTGATATTGTTTATCAGGAAATTTTAAAGCAGCTTGAGAGAGTT
CCTTCTTTTAAGGGAAAATATAAGACTTCTTATAATCGCATACAACATATTAAATCAGGCTCAATCATAAGGGCTTTGAG
TCGCGAAGCAAGACAGTTTGGAGAAGGAACAAATCCATCCCTGGCTATTTTGGATGAATATCATACCCATCTTACTAGTG
AGATTATGGAGTCTTTAGAAGAAGGTATGGGGGCAAGAATAAATCCACTGTCAGTTATTATAACTACAGCGGGAAGGAAC
CTAAACTCACCATGTAAGGCTGAATATGATTATTGTTCAAAGATTATTGACCCCCACAACCCTGTGGAGAATGAGAATTA
TTTTGTTTTGATTTGCGAATTGGATGAAGGTGACGATCCATTTGACGAGAGTCTATGGGTTAAGGCTAATCCTATAGCAG
CAACTTACCCTGAAGGTATAGAAGCTATTAGAAAACGTGCTAAAAAAGCTAAAGACGCAGATGATTCAATGACTTCGTAT
TTGACGAAGCGAATGAATATCTGGGTGAGCGCACAAGAGAGCGGGTATCTTGATACAGCTAAATGGAACAACTGCCTTTC
CACAGAGAAAATAGACTTGAAAGGTAGAAAAGTATATCTTGGTCTTGATTTAGCCACGAAACATGACTTGTGTTCACTTG
GGATCGTTATTCCATTAGAAAATGGAAAATTCTATGTTGATTCTCATTCGTTCTGTCCTTCGGAGTCACTTGAGGAAAGG
ATAAAAACGGATAGGGCGCCATTCAAAAAATGGCTAAGACAAGGATTACTCACTCAAACAGATGGTGCTGTAACAGATTT
TAGTTACATTTTAGATCATGTGGAAATGCTAATCAGACAATATGAATGGGAAGTACTAGAAGTATGCTATGACCCACATG
AAGCGTCATATTTTTCCCAGGAAATGACGGAGAAAGGCTATACCATGGTCGAAGTAAAGCAAAACATCGCCACTCAACAT
GAACCCTTGACGGAGTTTCGTGAAAAGGTGTTAAAAGGTGAGATCATCCATAATGGCAACGGCCTGCTTACATGGGCAAT
CGGCAACGCCGTCACCGTCAGCAACAGCGACGACAGAATAAAATTGAGCAAAAGCAAATCCACAGAGCGCATTGATCCGA
TTGCTGCTGTGATCGATGCATTTTCGCGAGCGATGTATTGTGAAGAGTCAATTGACTATAACAAGCTTTTTCTTTCAAAA
GGATTTAGCTTTTAG

Upstream 100 bases:

>100_bases
GCCAATTCGGTCTGTCTCCTTCGGATAGGGCGAAAATCGCAATGAATATCGTTACAAAGGAAGTCGAACAGGATGATGGT
GGGTCATTCAGTGGTCGTAT

Downstream 100 bases:

>100_bases
GGGGAGCTTATGAGCAAAGAGAAAGGTAAAAAAGAATGGTTTAAGAAGCTTTTAGCGATGTTTTTGCTAGCGTTAAATGA
TTTCTTATTTCTTGTAGGTG

Product: phage terminase-like protein large subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 564; Mature: 563

Protein sequence:

>564_residues
MTLLERVYQYSVDVLEGKVIACKKHKQAVERFLKDLERSIYDEDCYFYFDNNELEEFNEWASLFRHTKGVLAGQRIELTD
FQLFIAANIFCFKRKDNDYRKISSVYIQLARKNAKSQLLAIISSYVAFLSDQVEEVYISGWMKEQSDIVYQEILKQLERV
PSFKGKYKTSYNRIQHIKSGSIIRALSREARQFGEGTNPSLAILDEYHTHLTSEIMESLEEGMGARINPLSVIITTAGRN
LNSPCKAEYDYCSKIIDPHNPVENENYFVLICELDEGDDPFDESLWVKANPIAATYPEGIEAIRKRAKKAKDADDSMTSY
LTKRMNIWVSAQESGYLDTAKWNNCLSTEKIDLKGRKVYLGLDLATKHDLCSLGIVIPLENGKFYVDSHSFCPSESLEER
IKTDRAPFKKWLRQGLLTQTDGAVTDFSYILDHVEMLIRQYEWEVLEVCYDPHEASYFSQEMTEKGYTMVEVKQNIATQH
EPLTEFREKVLKGEIIHNGNGLLTWAIGNAVTVSNSDDRIKLSKSKSTERIDPIAAVIDAFSRAMYCEESIDYNKLFLSK
GFSF

Sequences:

>Translated_564_residues
MTLLERVYQYSVDVLEGKVIACKKHKQAVERFLKDLERSIYDEDCYFYFDNNELEEFNEWASLFRHTKGVLAGQRIELTD
FQLFIAANIFCFKRKDNDYRKISSVYIQLARKNAKSQLLAIISSYVAFLSDQVEEVYISGWMKEQSDIVYQEILKQLERV
PSFKGKYKTSYNRIQHIKSGSIIRALSREARQFGEGTNPSLAILDEYHTHLTSEIMESLEEGMGARINPLSVIITTAGRN
LNSPCKAEYDYCSKIIDPHNPVENENYFVLICELDEGDDPFDESLWVKANPIAATYPEGIEAIRKRAKKAKDADDSMTSY
LTKRMNIWVSAQESGYLDTAKWNNCLSTEKIDLKGRKVYLGLDLATKHDLCSLGIVIPLENGKFYVDSHSFCPSESLEER
IKTDRAPFKKWLRQGLLTQTDGAVTDFSYILDHVEMLIRQYEWEVLEVCYDPHEASYFSQEMTEKGYTMVEVKQNIATQH
EPLTEFREKVLKGEIIHNGNGLLTWAIGNAVTVSNSDDRIKLSKSKSTERIDPIAAVIDAFSRAMYCEESIDYNKLFLSK
GFSF
>Mature_563_residues
TLLERVYQYSVDVLEGKVIACKKHKQAVERFLKDLERSIYDEDCYFYFDNNELEEFNEWASLFRHTKGVLAGQRIELTDF
QLFIAANIFCFKRKDNDYRKISSVYIQLARKNAKSQLLAIISSYVAFLSDQVEEVYISGWMKEQSDIVYQEILKQLERVP
SFKGKYKTSYNRIQHIKSGSIIRALSREARQFGEGTNPSLAILDEYHTHLTSEIMESLEEGMGARINPLSVIITTAGRNL
NSPCKAEYDYCSKIIDPHNPVENENYFVLICELDEGDDPFDESLWVKANPIAATYPEGIEAIRKRAKKAKDADDSMTSYL
TKRMNIWVSAQESGYLDTAKWNNCLSTEKIDLKGRKVYLGLDLATKHDLCSLGIVIPLENGKFYVDSHSFCPSESLEERI
KTDRAPFKKWLRQGLLTQTDGAVTDFSYILDHVEMLIRQYEWEVLEVCYDPHEASYFSQEMTEKGYTMVEVKQNIATQHE
PLTEFREKVLKGEIIHNGNGLLTWAIGNAVTVSNSDDRIKLSKSKSTERIDPIAAVIDAFSRAMYCEESIDYNKLFLSKG
FSF

Specific function: Unknown

COG id: COG4626

COG function: function code R; Phage terminase-like protein, large subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage terminase family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR005021
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF03354 Terminase_1 [H]

EC number: NA

Molecular weight: Translated: 64874; Mature: 64743

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLERVYQYSVDVLEGKVIACKKHKQAVERFLKDLERSIYDEDCYFYFDNNELEEFNEW
CCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHH
ASLFRHTKGVLAGQRIELTDFQLFIAANIFCFKRKDNDYRKISSVYIQLARKNAKSQLLA
HHHHHHHHHHHCCCEEEEHHHEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
IISSYVAFLSDQVEEVYISGWMKEQSDIVYQEILKQLERVPSFKGKYKTSYNRIQHIKSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
SIIRALSREARQFGEGTNPSLAILDEYHTHLTSEIMESLEEGMGARINPLSVIITTAGRN
HHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC
LNSPCKAEYDYCSKIIDPHNPVENENYFVLICELDEGDDPFDESLWVKANPIAATYPEGI
CCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCHHHH
EAIRKRAKKAKDADDSMTSYLTKRMNIWVSAQESGYLDTAKWNNCLSTEKIDLKGRKVYL
HHHHHHHHHCCCCCHHHHHHHHHHHHEEEEECCCCCEECHHCCCCCCCCEEECCCCEEEE
GLDLATKHDLCSLGIVIPLENGKFYVDSHSFCPSESLEERIKTDRAPFKKWLRQGLLTQT
EEEECCCCCCEEEEEEEEECCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCC
DGAVTDFSYILDHVEMLIRQYEWEVLEVCYDPHEASYFSQEMTEKGYTMVEVKQNIATQH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEHHHHHCCC
EPLTEFREKVLKGEIIHNGNGLLTWAIGNAVTVSNSDDRIKLSKSKSTERIDPIAAVIDA
CHHHHHHHHHHCCCEEECCCEEEEEECCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
FSRAMYCEESIDYNKLFLSKGFSF
HHHHHHHHHCCCHHHHHHHCCCCC
>Mature Secondary Structure 
TLLERVYQYSVDVLEGKVIACKKHKQAVERFLKDLERSIYDEDCYFYFDNNELEEFNEW
CHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHH
ASLFRHTKGVLAGQRIELTDFQLFIAANIFCFKRKDNDYRKISSVYIQLARKNAKSQLLA
HHHHHHHHHHHCCCEEEEHHHEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
IISSYVAFLSDQVEEVYISGWMKEQSDIVYQEILKQLERVPSFKGKYKTSYNRIQHIKSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
SIIRALSREARQFGEGTNPSLAILDEYHTHLTSEIMESLEEGMGARINPLSVIITTAGRN
HHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC
LNSPCKAEYDYCSKIIDPHNPVENENYFVLICELDEGDDPFDESLWVKANPIAATYPEGI
CCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCHHHH
EAIRKRAKKAKDADDSMTSYLTKRMNIWVSAQESGYLDTAKWNNCLSTEKIDLKGRKVYL
HHHHHHHHHCCCCCHHHHHHHHHHHHEEEEECCCCCEECHHCCCCCCCCEEECCCCEEEE
GLDLATKHDLCSLGIVIPLENGKFYVDSHSFCPSESLEERIKTDRAPFKKWLRQGLLTQT
EEEECCCCCCEEEEEEEEECCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCC
DGAVTDFSYILDHVEMLIRQYEWEVLEVCYDPHEASYFSQEMTEKGYTMVEVKQNIATQH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEHHHHHCCC
EPLTEFREKVLKGEIIHNGNGLLTWAIGNAVTVSNSDDRIKLSKSKSTERIDPIAAVIDA
CHHHHHHHHHHCCCEEECCCEEEEEECCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
FSRAMYCEESIDYNKLFLSKGFSF
HHHHHHHHHCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]