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The map label for this gene is yisU [H]

Identifier: 56962974

GI number: 56962974

Start: 1312428

End: 1313060

Strand: Direct

Name: yisU [H]

Synonym: ABC1202

Alternate gene names: 56962974

Gene position: 1312428-1313060 (Clockwise)

Preceding gene: 56962972

Following gene: 56962976

Centisome position: 30.49

GC content: 46.6

Gene sequence:

>633_bases
ATGAAGGCAATGGGAATCGCTTTTTTACATGGCATGATTTTATCCATCGGGCTCATATTGCCCCTTGGTCCACAAAATTT
GTTCATTTTTAATCAAGGAGCGACACATAAAAAGCTGTTAAACGCAATGCCAGCTGTCATAACGGCATCATTATGCGATA
CGGCTCTCATTTTGCTGGCTGTCATGGGTGTGTCGGCAGCGGTGCTTGCTATTCCTGGCCTGCAAGTGTTCTTGCTCGTT
TGCGGGTTTGTCTTTTTGCTATGGATCGGCCAATCGATTTGGCGGGCAAAACCTGAACATGCCAGTGCCGTAGATGAAAC
GTTGTCAATGAAAAAGCAAGTTTTATTTGCTCTGTCCGTGTCAGTTTTAAATCCTCACGCGGTATTGGATACAATTGGCG
TCATAGGCACGAGTTCGCTTCGCTATGAAAGTTTAAGTGAGAAAGCGATGTTTGCGCTAGCTTGCATTGCTGTTTCTTGG
CTCGCTTTCTGTTTGCTTGCTGCTGCTGGGAAGACGGTGCGGGCGATTGATAAGAGAGGTACATGGCTTGTGCGCGTCAA
CAAAGTCTCGGCCATTTGCATTTGGGCAATGGCGCTGCTTATTGGCGCCCAACTCGTGCAAATCATTTTTTAA

Upstream 100 bases:

>100_bases
TCCCTTCGAAATTGGTTGGGTCTTTTCCCAGCCAATTGGTGGTGTTGTTTTTATTAAACCACAGCTAAGGTAAGAGAGGA
AGAGCAAAATCAATAAAAGG

Downstream 100 bases:

>100_bases
GGAAGAACGATATGTTAGGAGGCTAGCAGCTTTATAGTAGCTAGCCTTCCAGCGAGCAATCGACTTGCGAGAAAATAAAA
TGAGTTACAGTTGACGCGTA

Product: lysine efflux permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MKAMGIAFLHGMILSIGLILPLGPQNLFIFNQGATHKKLLNAMPAVITASLCDTALILLAVMGVSAAVLAIPGLQVFLLV
CGFVFLLWIGQSIWRAKPEHASAVDETLSMKKQVLFALSVSVLNPHAVLDTIGVIGTSSLRYESLSEKAMFALACIAVSW
LAFCLLAAAGKTVRAIDKRGTWLVRVNKVSAICIWAMALLIGAQLVQIIF

Sequences:

>Translated_210_residues
MKAMGIAFLHGMILSIGLILPLGPQNLFIFNQGATHKKLLNAMPAVITASLCDTALILLAVMGVSAAVLAIPGLQVFLLV
CGFVFLLWIGQSIWRAKPEHASAVDETLSMKKQVLFALSVSVLNPHAVLDTIGVIGTSSLRYESLSEKAMFALACIAVSW
LAFCLLAAAGKTVRAIDKRGTWLVRVNKVSAICIWAMALLIGAQLVQIIF
>Mature_210_residues
MKAMGIAFLHGMILSIGLILPLGPQNLFIFNQGATHKKLLNAMPAVITASLCDTALILLAVMGVSAAVLAIPGLQVFLLV
CGFVFLLWIGQSIWRAKPEHASAVDETLSMKKQVLFALSVSVLNPHAVLDTIGVIGTSSLRYESLSEKAMFALACIAVSW
LAFCLLAAAGKTVRAIDKRGTWLVRVNKVSAICIWAMALLIGAQLVQIIF

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=160, Percent_Identity=34.375, Blast_Score=70, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22444; Mature: 22444

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAMGIAFLHGMILSIGLILPLGPQNLFIFNQGATHKKLLNAMPAVITASLCDTALILLA
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VMGVSAAVLAIPGLQVFLLVCGFVFLLWIGQSIWRAKPEHASAVDETLSMKKQVLFALSV
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SVLNPHAVLDTIGVIGTSSLRYESLSEKAMFALACIAVSWLAFCLLAAAGKTVRAIDKRG
HHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC
TWLVRVNKVSAICIWAMALLIGAQLVQIIF
CEEEEECCHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKAMGIAFLHGMILSIGLILPLGPQNLFIFNQGATHKKLLNAMPAVITASLCDTALILLA
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VMGVSAAVLAIPGLQVFLLVCGFVFLLWIGQSIWRAKPEHASAVDETLSMKKQVLFALSV
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SVLNPHAVLDTIGVIGTSSLRYESLSEKAMFALACIAVSWLAFCLLAAAGKTVRAIDKRG
HHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC
TWLVRVNKVSAICIWAMALLIGAQLVQIIF
CEEEEECCHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377 [H]