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The map label for this gene is ykkA [H]

Identifier: 56962972

GI number: 56962972

Start: 1310259

End: 1310774

Strand: Direct

Name: ykkA [H]

Synonym: ABC1200

Alternate gene names: 56962972

Gene position: 1310259-1310774 (Clockwise)

Preceding gene: 56962969

Following gene: 56962974

Centisome position: 30.44

GC content: 46.32

Gene sequence:

>516_bases
TTGCATTATCATTTACATAGACAAACAGAGATGGAGCCGCGCGTGAATATGCTCTTTTCGATGGTGGAGGAGAATTACGA
GCGACTTCGGGGGCTTTTGGAAAAGGTGTCGGAAGAAGAGCTTTTCTATAAAGGGCCTGGCCAAGCATACAATAGTATTG
GCCAGCTGTTGAAGCATTTGGCTTTTGTGGATTTGCAGTGGAATTACCGAATCAAGGAAGAACCTCTTCCTGTCGAGCTT
GAAAAAGCATATGGCCCAGAACTTGATGCAACAGGGAAGCTGCCTGCCGTTGAGAGCGGCTCGACCATCGTCGATGTGCT
TGATGCTTACGACGTCGTGTTCCAATCTTTTAAGGAAACGTGTAAAACGCTTAAGGATGAAGAGCTGGATAAGATCATCC
CATACAACGATCATACAGCGACAATCGGTTGGGGCATTTGGCATATGGCTGACCATAGTCGTTACCATCAAGCCCATCTT
GTTTTAATGAGAAAATGGTTTCGGCAGCGTCAGTGA

Upstream 100 bases:

>100_bases
TTTTACCACAAAATAGCAAAAAGGGATCGTTGCTTGCCTCAAGCAGGAAAGTAGCTTTTTGTGACTATACTCGGTACGCT
GACGAGAGGGAGGGATTGCT

Downstream 100 bases:

>100_bases
TTAAAGCGGCACACACAGCAATGCCTCTTTTTGTTAGCGCATTTAAAGAGGTTTGGCTAATAGCATGTGCCCCCTAAGGC
GAACAGTTGGTTTGCTTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MHYHLHRQTEMEPRVNMLFSMVEENYERLRGLLEKVSEEELFYKGPGQAYNSIGQLLKHLAFVDLQWNYRIKEEPLPVEL
EKAYGPELDATGKLPAVESGSTIVDVLDAYDVVFQSFKETCKTLKDEELDKIIPYNDHTATIGWGIWHMADHSRYHQAHL
VLMRKWFRQRQ

Sequences:

>Translated_171_residues
MHYHLHRQTEMEPRVNMLFSMVEENYERLRGLLEKVSEEELFYKGPGQAYNSIGQLLKHLAFVDLQWNYRIKEEPLPVEL
EKAYGPELDATGKLPAVESGSTIVDVLDAYDVVFQSFKETCKTLKDEELDKIIPYNDHTATIGWGIWHMADHSRYHQAHL
VLMRKWFRQRQ
>Mature_171_residues
MHYHLHRQTEMEPRVNMLFSMVEENYERLRGLLEKVSEEELFYKGPGQAYNSIGQLLKHLAFVDLQWNYRIKEEPLPVEL
EKAYGPELDATGKLPAVESGSTIVDVLDAYDVVFQSFKETCKTLKDEELDKIIPYNDHTATIGWGIWHMADHSRYHQAHL
VLMRKWFRQRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007061 [H]

Pfam domain/function: PF04978 DUF664 [H]

EC number: NA

Molecular weight: Translated: 20193; Mature: 20193

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYHLHRQTEMEPRVNMLFSMVEENYERLRGLLEKVSEEELFYKGPGQAYNSIGQLLKHL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEECCCCHHHHHHHHHHHHH
AFVDLQWNYRIKEEPLPVELEKAYGPELDATGKLPAVESGSTIVDVLDAYDVVFQSFKET
HHHCCCCCCEECCCCCCEEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
CKTLKDEELDKIIPYNDHTATIGWGIWHMADHSRYHQAHLVLMRKWFRQRQ
HHHHCHHHHHHCCCCCCCEEEEHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHYHLHRQTEMEPRVNMLFSMVEENYERLRGLLEKVSEEELFYKGPGQAYNSIGQLLKHL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEECCCCHHHHHHHHHHHHH
AFVDLQWNYRIKEEPLPVELEKAYGPELDATGKLPAVESGSTIVDVLDAYDVVFQSFKET
HHHCCCCCCEECCCCCCEEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
CKTLKDEELDKIIPYNDHTATIGWGIWHMADHSRYHQAHLVLMRKWFRQRQ
HHHHCHHHHHHCCCCCCCEEEEHHHHHHHHHCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8682784; 9384377 [H]