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The map label for this gene is gidB [H]

Identifier: 55981940

GI number: 55981940

Start: 1845580

End: 1846329

Strand: Reverse

Name: gidB [H]

Synonym: TTHA1971

Alternate gene names: 55981940

Gene position: 1846329-1845580 (Counterclockwise)

Preceding gene: 55981941

Following gene: 55981939

Centisome position: 99.82

GC content: 72.13

Gene sequence:

>750_bases
ATGTTTCACGGGAAACACCCGGGGGGCCTGAGCGAAAGGGGCCGGGCCCTGCTCTTGGAGGGGGGAAAGGCCTTGGGCCT
GGACCTAAAGCCCCACCTGGAGGCCTTCTCCCGCCTCTACGCCCTCCTCCAGGAGGCGAGCGGGAAGGTCAACCTCACCG
CCCTCCGCGGTGAGGAGGAGGTGGTGGTCAAGCACTTCCTGGACTCCCTGACTCTCCTCAGGCTTCCCCTCTGGCAGGGG
CCCCTACGGGTCCTGGACCTGGGGACGGGGGCGGGGTTTCCCGGCCTTCCCTTGAAGATCGTCCGCCCCGAGCTGGAGCT
CGTCCTCGTGGACGCCACCCGGAAGAAGGTGGCCTTCGTGGAGCGGGCCATAGAGGTCCTTGGGCTCAAGGGGGCCCGGG
CCCTCTGGGGCCGGGCGGAGGTCCTCGCCCGGGAGGCGGGCCACCGGGAGGCCTACGCCCGGGCGGTGGCCCGGGCCGTG
GCCCCTCTCTGCGTCCTCTCCGAGCTCCTTTTGCCCTTCCTCGAGGTGGGCGGGGCGGCGGTAGCCATGAAGGGGCCCCG
GGTGGAGGAGGAGCTCGCCCCCCTGCCCCCCGCTCTGGAGCGGCTCGGCGGGCGGCTTGGGGAGGTCCTCGCCCTCCAGC
TTCCCCTCTCCGGGGAGGCGCGCCACCTGGTGGTGTTGGAGAAGACCGCCCCCACCCCCCCCGCCTACCCCCGGCGCCCT
GGGGTTCCCGAGCGGCATCCGTTATGCTAA

Upstream 100 bases:

>100_bases
CCCGCCACCGGCCCAAAAGCCTCGCCGAGGCGGCCCGGATCCCCGGGGTGCGGGACTCGGACCTCACGGCCCTGGCCGTC
CACCTGCGGCGGGGCGCCTG

Downstream 100 bases:

>100_bases
GGGCCAAGGTGCGGCGCATCGCCTTGGCCAACCAGAAGGGCGGGGTGGGCAAGACCACCACGGCCATCAACCTCGCGGCC
TACCTGGCCCGCCTGGGCAA

Product: 16S rRNA methyltransferase GidB

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MFHGKHPGGLSERGRALLLEGGKALGLDLKPHLEAFSRLYALLQEASGKVNLTALRGEEEVVVKHFLDSLTLLRLPLWQG
PLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARAV
APLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVLEKTAPTPPAYPRRP
GVPERHPLC

Sequences:

>Translated_249_residues
MFHGKHPGGLSERGRALLLEGGKALGLDLKPHLEAFSRLYALLQEASGKVNLTALRGEEEVVVKHFLDSLTLLRLPLWQG
PLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARAV
APLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVLEKTAPTPPAYPRRP
GVPERHPLC
>Mature_249_residues
MFHGKHPGGLSERGRALLLEGGKALGLDLKPHLEAFSRLYALLQEASGKVNLTALRGEEEVVVKHFLDSLTLLRLPLWQG
PLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARAV
APLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVLEKTAPTPPAYPRRP
GVPERHPLC

Specific function: Specifically methylates the N7 position of a guanosine in 16S rRNA [H]

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family [H]

Homologues:

Organism=Escherichia coli, GI1790179, Length=212, Percent_Identity=33.4905660377358, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003682 [H]

Pfam domain/function: PF02527 GidB [H]

EC number: 2.1.-.- [C]

Molecular weight: Translated: 26832; Mature: 26832

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHGKHPGGLSERGRALLLEGGKALGLDLKPHLEAFSRLYALLQEASGKVNLTALRGEEE
CCCCCCCCCCCCCCCEEEEECCCEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHH
VVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFV
HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEECCCEEEEEECCCHHHHHHH
ERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARAVAPLCVLSELLLPFLEVGGAA
HHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
VAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVLEKTAPTPPAYPRRP
EEECCCCCHHHHCCCCHHHHHHCCHHHHEEEEECCCCCCCEEEEEEECCCCCCCCCCCCC
GVPERHPLC
CCCCCCCCC
>Mature Secondary Structure
MFHGKHPGGLSERGRALLLEGGKALGLDLKPHLEAFSRLYALLQEASGKVNLTALRGEEE
CCCCCCCCCCCCCCCEEEEECCCEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHH
VVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFV
HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEECCCEEEEEECCCHHHHHHH
ERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARAVAPLCVLSELLLPFLEVGGAA
HHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
VAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVLEKTAPTPPAYPRRP
EEECCCCCHHHHCCCCHHHHHHCCHHHHEEEEECCCCCCCEEEEEEECCCCCCCCCCCCC
GVPERHPLC
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA