| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is mnmG [H]
Identifier: 55981941
GI number: 55981941
Start: 1846329
End: 1848122
Strand: Reverse
Name: mnmG [H]
Synonym: TTHA1972
Alternate gene names: 55981941
Gene position: 1848122-1846329 (Counterclockwise)
Preceding gene: NA
Following gene: 55981940
Centisome position: 99.91
GC content: 72.24
Gene sequence:
>1794_bases ATGGCGGGCTACGACGTGGTGGTGGTGGGAGGGGGCCACGCGGGCCTCGAGGCGGCCTGGGCGGCGGCCGCCCTGGGGGT CCGGGTGGCCCTGGTGACGGTGAACCCCGACCGGATCGGCATGATGCCCTGTAACCCCGCCGTGGGGGGGCCGGGGAAAA GCCAGCTCGTGGCGGAGGTGGTGGCCCTGGGCGGGCTCATGGGCCGGGCGGCGGACGCCGCCGCCATCCACACCCGGGTC CTGAACCGCTCCAAGGGCCCTGCGGTGCAAAGCCTTAGGGTCCAGGTGGACCGGGACCTCTACGCCCTCAAGGCCCAGGA GATCCTCGCGGAAAGGCCCGTGGAGGTGCTGCGGGGCGAGGTGGCGGCCCTCTGGGTAGAGGGGGGGAGGCTTCTCGGCG TCCGCACCGTGGACGGGCGGACCCTCCCCGCCAAGGCGGTGGTGGTGGCGGGGGGGACCTTCCTTTCCGGGGTGGTCTGG TACGGAAGGAAGAGCCGTCCCGCCGGGCGCCAGGGGGAGCCCCCGGCCCGTTTCCTCTCCCAAAGCCTCAAGGCGGTGGG CCACACCCTGAGGCGGTTCAAGACGGGGACCCCGCCCAGGATCCGCGCGGACAGCGTGGACTTCGGGCGCCTCGAGGTGG TCCCGCCCGAGGTGCCGCCCGGGAGTTTCACGGGAAACCCTGGGCCCCACGCCGCCAGGCTCCCCACCTGGCAGACCCGC ACCACGGCGCGGACCCACCGCCTCATCCGCGAGAACCTCCACCTCTCCCCCCTCTACGCCGGGGACATCCAGGGCATCGG CCCCCGGTACTGCCCCTCCATTGAGGACAAGGTGGTGCGCTTCGCCGACAAGGAGAGCCACCTCCTCTTCGTGGAGCCGG ACGGGCTCTCCACCACCGAGGTCTACCTCCAGGGCTTCTCCTCAAGCCTCCCTCCCGAGCTCCAGGAGGAGATGGTGCGC TCCCTCCCCGGGTTTGAGCGGGCGGTGATCCAGCGCTACGCCTACGCCGTGGAGTACGACAGCCTGGACCCCACGGAGCT CACCCGGGGCCTCCAGTCCCGCCTCCTGCCTGGGCTTTTCAGCGCCGGGCAGGTGAACGGCACCTCGGGCTACGAGGAGG CGGCGGCCCAGGGGCTTCTGGCCGGGCTCAACGCCGCCCGGTTCGCCCTGGGCCTTCCCGAGGTCCACCTCCCCCGGGAA AGCGGCTACATCGGGGTCCTGGTGGACGACCTCGTGGGCCGGGGCACGGACGAGCCCTACCGGATGATGACCTCCCGGGT GGAGCTCCGCCTCCTCTGCCGGGCGGACAACGCCGACGAGCGCCTCACCCCTTTGGCCGTGGCCTGGGGTCTGAGGCCCA AAGAGGATCTGGAGCGGGTGGAGGCCAAGTACCGCAGGGTGGCGGCGGAGCTTAGGCGCCTTCAGGCCCTTCGGGTGGAA GGGGTCTCCGGTCTCCAGTGGCTTAGGCGGCCGGAGAACACCTACCGGGCCCTGGCGGAGCGCTTCCCCCCGTCCGAGCC TCTCTCCCCCGAGGAGGCCTACCAGGTGGAGGTGCGGGCCAAGTACGCGGGCTACATTGAGCGGCAGGAGCGCCTGCGGG AGAAGATGAAGGACCTCGAGGCCTTCCGCATCCCCGAGGGGATGGACTTCCCCAAGGTGCCGGGGCTTTCCCGGGAGGCG GCGGAGAAGCTCTCCCGCCACCGGCCCAAAAGCCTCGCCGAGGCGGCCCGGATCCCCGGGGTGCGGGACTCGGACCTCAC GGCCCTGGCCGTCCACCTGCGGCGGGGCGCCTGA
Upstream 100 bases:
>100_bases TGCTCCAGAACGTGTTGCCAGACGGCCTCGTGCGACAACCTTCCCCCTCCGTCGTCCCGGTCCCCCATTTTAACCCCGGG ACCCGCTAGAGTGAGATGGG
Downstream 100 bases:
>100_bases TGTTTCACGGGAAACACCCGGGGGGCCTGAGCGAAAGGGGCCGGGCCCTGCTCTTGGAGGGGGGAAAGGCCTTGGGCCTG GACCTAAAGCCCCACCTGGA
Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A [H]
Number of amino acids: Translated: 597; Mature: 596
Protein sequence:
>597_residues MAGYDVVVVGGGHAGLEAAWAAAALGVRVALVTVNPDRIGMMPCNPAVGGPGKSQLVAEVVALGGLMGRAADAAAIHTRV LNRSKGPAVQSLRVQVDRDLYALKAQEILAERPVEVLRGEVAALWVEGGRLLGVRTVDGRTLPAKAVVVAGGTFLSGVVW YGRKSRPAGRQGEPPARFLSQSLKAVGHTLRRFKTGTPPRIRADSVDFGRLEVVPPEVPPGSFTGNPGPHAARLPTWQTR TTARTHRLIRENLHLSPLYAGDIQGIGPRYCPSIEDKVVRFADKESHLLFVEPDGLSTTEVYLQGFSSSLPPELQEEMVR SLPGFERAVIQRYAYAVEYDSLDPTELTRGLQSRLLPGLFSAGQVNGTSGYEEAAAQGLLAGLNAARFALGLPEVHLPRE SGYIGVLVDDLVGRGTDEPYRMMTSRVELRLLCRADNADERLTPLAVAWGLRPKEDLERVEAKYRRVAAELRRLQALRVE GVSGLQWLRRPENTYRALAERFPPSEPLSPEEAYQVEVRAKYAGYIERQERLREKMKDLEAFRIPEGMDFPKVPGLSREA AEKLSRHRPKSLAEAARIPGVRDSDLTALAVHLRRGA
Sequences:
>Translated_597_residues MAGYDVVVVGGGHAGLEAAWAAAALGVRVALVTVNPDRIGMMPCNPAVGGPGKSQLVAEVVALGGLMGRAADAAAIHTRV LNRSKGPAVQSLRVQVDRDLYALKAQEILAERPVEVLRGEVAALWVEGGRLLGVRTVDGRTLPAKAVVVAGGTFLSGVVW YGRKSRPAGRQGEPPARFLSQSLKAVGHTLRRFKTGTPPRIRADSVDFGRLEVVPPEVPPGSFTGNPGPHAARLPTWQTR TTARTHRLIRENLHLSPLYAGDIQGIGPRYCPSIEDKVVRFADKESHLLFVEPDGLSTTEVYLQGFSSSLPPELQEEMVR SLPGFERAVIQRYAYAVEYDSLDPTELTRGLQSRLLPGLFSAGQVNGTSGYEEAAAQGLLAGLNAARFALGLPEVHLPRE SGYIGVLVDDLVGRGTDEPYRMMTSRVELRLLCRADNADERLTPLAVAWGLRPKEDLERVEAKYRRVAAELRRLQALRVE GVSGLQWLRRPENTYRALAERFPPSEPLSPEEAYQVEVRAKYAGYIERQERLREKMKDLEAFRIPEGMDFPKVPGLSREA AEKLSRHRPKSLAEAARIPGVRDSDLTALAVHLRRGA >Mature_596_residues AGYDVVVVGGGHAGLEAAWAAAALGVRVALVTVNPDRIGMMPCNPAVGGPGKSQLVAEVVALGGLMGRAADAAAIHTRVL NRSKGPAVQSLRVQVDRDLYALKAQEILAERPVEVLRGEVAALWVEGGRLLGVRTVDGRTLPAKAVVVAGGTFLSGVVWY GRKSRPAGRQGEPPARFLSQSLKAVGHTLRRFKTGTPPRIRADSVDFGRLEVVPPEVPPGSFTGNPGPHAARLPTWQTRT TARTHRLIRENLHLSPLYAGDIQGIGPRYCPSIEDKVVRFADKESHLLFVEPDGLSTTEVYLQGFSSSLPPELQEEMVRS LPGFERAVIQRYAYAVEYDSLDPTELTRGLQSRLLPGLFSAGQVNGTSGYEEAAAQGLLAGLNAARFALGLPEVHLPRES GYIGVLVDDLVGRGTDEPYRMMTSRVELRLLCRADNADERLTPLAVAWGLRPKEDLERVEAKYRRVAAELRRLQALRVEG VSGLQWLRRPENTYRALAERFPPSEPLSPEEAYQVEVRAKYAGYIERQERLREKMKDLEAFRIPEGMDFPKVPGLSREAA EKLSRHRPKSLAEAARIPGVRDSDLTALAVHLRRGA
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 [H]
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family [H]
Homologues:
Organism=Homo sapiens, GI74024895, Length=620, Percent_Identity=40.4838709677419, Blast_Score=389, Evalue=1e-108, Organism=Homo sapiens, GI19882217, Length=645, Percent_Identity=39.3798449612403, Blast_Score=376, Evalue=1e-104, Organism=Homo sapiens, GI183227703, Length=660, Percent_Identity=38.030303030303, Blast_Score=370, Evalue=1e-102, Organism=Escherichia coli, GI2367273, Length=615, Percent_Identity=46.6666666666667, Blast_Score=494, Evalue=1e-141, Organism=Caenorhabditis elegans, GI17534255, Length=618, Percent_Identity=39.4822006472492, Blast_Score=418, Evalue=1e-117, Organism=Saccharomyces cerevisiae, GI6321202, Length=623, Percent_Identity=38.0417335473515, Blast_Score=385, Evalue=1e-108, Organism=Drosophila melanogaster, GI24658174, Length=630, Percent_Identity=39.2063492063492, Blast_Score=383, Evalue=1e-106,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 [H]
Pfam domain/function: PF01134 GIDA [H]
EC number: NA
Molecular weight: Translated: 65203; Mature: 65071
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS01280 GIDA_1 ; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGYDVVVVGGGHAGLEAAWAAAALGVRVALVTVNPDRIGMMPCNPAVGGPGKSQLVAEV CCCCEEEEECCCCCCHHHHHHHHHHCEEEEEEEECCCCEECCCCCCCCCCCCHHHHHHHH VALGGLMGRAADAAAIHTRVLNRSKGPAVQSLRVQVDRDLYALKAQEILAERPVEVLRGE HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEECCCHHHHHHHHHHHHHCCHHHHCCC VAALWVEGGRLLGVRTVDGRTLPAKAVVVAGGTFLSGVVWYGRKSRPAGRQGEPPARFLS EEEEEECCCEEEEEEECCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCHHHHHH QSLKAVGHTLRRFKTGTPPRIRADSVDFGRLEVVPPEVPPGSFTGNPGPHAARLPTWQTR HHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCH TTARTHRLIRENLHLSPLYAGDIQGIGPRYCPSIEDKVVRFADKESHLLFVEPDGLSTTE HHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCHHH VYLQGFSSSLPPELQEEMVRSLPGFERAVIQRYAYAVEYDSLDPTELTRGLQSRLLPGLF HHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH SAGQVNGTSGYEEAAAQGLLAGLNAARFALGLPEVHLPRESGYIGVLVDDLVGRGTDEPY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEEHHHHHCCCCCCHH RMMTSRVELRLLCRADNADERLTPLAVAWGLRPKEDLERVEAKYRRVAAELRRLQALRVE HHHHHHHHEEEEEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GVSGLQWLRRPENTYRALAERFPPSEPLSPEEAYQVEVRAKYAGYIERQERLREKMKDLE CCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHEEEEEEHHHHHHHHHHHHHHHHHHHHH AFRIPEGMDFPKVPGLSREAAEKLSRHRPKSLAEAARIPGVRDSDLTALAVHLRRGA HHCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure AGYDVVVVGGGHAGLEAAWAAAALGVRVALVTVNPDRIGMMPCNPAVGGPGKSQLVAEV CCCEEEEECCCCCCHHHHHHHHHHCEEEEEEEECCCCEECCCCCCCCCCCCHHHHHHHH VALGGLMGRAADAAAIHTRVLNRSKGPAVQSLRVQVDRDLYALKAQEILAERPVEVLRGE HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEECCCHHHHHHHHHHHHHCCHHHHCCC VAALWVEGGRLLGVRTVDGRTLPAKAVVVAGGTFLSGVVWYGRKSRPAGRQGEPPARFLS EEEEEECCCEEEEEEECCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCHHHHHH QSLKAVGHTLRRFKTGTPPRIRADSVDFGRLEVVPPEVPPGSFTGNPGPHAARLPTWQTR HHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCH TTARTHRLIRENLHLSPLYAGDIQGIGPRYCPSIEDKVVRFADKESHLLFVEPDGLSTTE HHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCHHH VYLQGFSSSLPPELQEEMVRSLPGFERAVIQRYAYAVEYDSLDPTELTRGLQSRLLPGLF HHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHH SAGQVNGTSGYEEAAAQGLLAGLNAARFALGLPEVHLPRESGYIGVLVDDLVGRGTDEPY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEEHHHHHCCCCCCHH RMMTSRVELRLLCRADNADERLTPLAVAWGLRPKEDLERVEAKYRRVAAELRRLQALRVE HHHHHHHHEEEEEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GVSGLQWLRRPENTYRALAERFPPSEPLSPEEAYQVEVRAKYAGYIERQERLREKMKDLE CCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHEEEEEEHHHHHHHHHHHHHHHHHHHHH AFRIPEGMDFPKVPGLSREAAEKLSRHRPKSLAEAARIPGVRDSDLTALAVHLRRGA HHCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA