| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981922
Identifier: 55981922
GI number: 55981922
Start: 1830250
End: 1830531
Strand: Direct
Name: 55981922
Synonym: TTHA1953
Alternate gene names: NA
Gene position: 1830250-1830531 (Clockwise)
Preceding gene: 55981921
Following gene: 55981923
Centisome position: 98.95
GC content: 64.54
Gene sequence:
>282_bases ATGACGCGGACCACCGACCTCGGACAAGAGACCGTGGACAACATCCTCAAGCGCCTCCGCCGTATTGAGGGCCAGGTGCG GGGGCTCCAGAAGATGGTGGCCGAGGGCCGCCCCTGCGACGAGGTCCTCACCCAGATGACCGCCACCAAGAAGGCCATGG AGGCGGCGGCCACCCTGATCCTCCACGAGTTCCTGAACGTCTGCGCCGCCGAGGTCTCCGAGGGCAAGGTGAACCCCAAG AAGCCCGAGGAGATCGCCACCATGCTGAAGAAGTTCATCTAG
Upstream 100 bases:
>100_bases GGGCGGGTGCTCTGGGTGCGGCGGCCCAGGACCCGGGAGGCGCCGGAGGAGGAACCCCTGAGCCAAGACGAGATAGGGGG TACTGGTATATAATGGGGGC
Downstream 100 bases:
>100_bases ATGGGTCGGCTTCGGGGGCGCCTCCGGCGCCTCCTCCGGGCCCTTCTCGCCCAGGAGGCGCCGGACGACGCCTTCGCCCT GCGCTTCCTGGAGGGGGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MTRTTDLGQETVDNILKRLRRIEGQVRGLQKMVAEGRPCDEVLTQMTATKKAMEAAATLILHEFLNVCAAEVSEGKVNPK KPEEIATMLKKFI
Sequences:
>Translated_93_residues MTRTTDLGQETVDNILKRLRRIEGQVRGLQKMVAEGRPCDEVLTQMTATKKAMEAAATLILHEFLNVCAAEVSEGKVNPK KPEEIATMLKKFI >Mature_92_residues TRTTDLGQETVDNILKRLRRIEGQVRGLQKMVAEGRPCDEVLTQMTATKKAMEAAATLILHEFLNVCAAEVSEGKVNPKK PEEIATMLKKFI
Specific function: Unknown
COG id: COG1937
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10385; Mature: 10254
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTTDLGQETVDNILKRLRRIEGQVRGLQKMVAEGRPCDEVLTQMTATKKAMEAAATLI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LHEFLNVCAAEVSEGKVNPKKPEEIATMLKKFI HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC >Mature Secondary Structure TRTTDLGQETVDNILKRLRRIEGQVRGLQKMVAEGRPCDEVLTQMTATKKAMEAAATLI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LHEFLNVCAAEVSEGKVNPKKPEEIATMLKKFI HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA