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The map label for this gene is mmgC [H]

Identifier: 55981885

GI number: 55981885

Start: 1797450

End: 1798568

Strand: Reverse

Name: mmgC [H]

Synonym: TTHA1916

Alternate gene names: 55981885

Gene position: 1798568-1797450 (Counterclockwise)

Preceding gene: 55981886

Following gene: 55981884

Centisome position: 97.23

GC content: 70.87

Gene sequence:

>1119_bases
ATGACCCTCACCCAGGAGCAACGGCTGGTTCTGGACGCGGTGCGCCGGGTGGCCCGGGAGGTCCTCTACCCCCTCGCCCC
CGAGTACGACCGGAAGGCCGAGTACCCCTGGCCCCAGCTCAAGGCCCTGGCCGAGCTCGGCCTCCTCGGCATGACCACCC
CGGAGGAGTGGGGAGGGGTGGGCCTGGACTCCGTGACCTGGGCCTTGGCCCTGGAGGAGCTCGCCGCCGCCGACCCCAGC
GTGGCCGTCATCGTCTCCGTGACCAGCGGCCTTCCCCAGTACATGCTCCTCCGCTTCGGGAGCGAGGCGCAGAAGCGGCG
CTACCTCGTGCCCCTGGCCCGGGGGGAGTGGATCGGGGCCTTCTGCCTCACCGAGCCCCAGGCGGGCTCCGACGCCAAAA
GCCTCCGCGCCGAGGCGCGGCGGGTCAAGGGCGGGTTCGTGCTGAACGGGGTCAAGAGCTGGATCACCTCCGCTGGCCAC
GCCCACCTCTACGTGGTCATGGCCCGCACGGAGAAGGGGATCAGCGCCTTCTTGGTGGAGAAGGGTACTCCAGGGCTTTC
CTTCGGCCGCCCCGAGGAGAAGATGGGCCTCCACGCGGCCCACACCGCCGAGGTGCGCCTCGAGGAGGTCTTCGTCCCCG
AGGAGAACCTTCTCGGGGAGGAGGGGCGGGGCCTGGCCTATGCCCTTGCGGGCCTGGACTCGGGGCGCGTGGGGGTGGCG
GCCCAGGCGGTGGGCATCGCCCGCGGGGCCTTTGAGATCGCCAAGGCCTACGCCGAGGAGCGGGAGCAGTTCGGGAAGAA
GCTAAAGGAGCACCAGGCCATCGCCTTCAAGATCGCCGACATGCACGTGAAGATCGCCGCCGCCCGCGCCCTGGTCCTCG
AGGCCGCGAGGAAGAAGGACCGGGGGGAGAGGTTCACCCTCGAGGCCAGCGCCGCCAAGCTCTTCGCCAGCGCCGCCGCC
GTGGAGGTCACCCGGGAGGCGGTCCAGGTCCTGGGGGGGTACGGCTACCACCGGGACTACCGGGTGGAGCGGTACTACCG
GGACGCCAAGGTGACGGAGATCTACGAGGGCACCTCGGAGATCCAGCGCCTCGTCATCGCCCGGGAGCTCTACCGCTAG

Upstream 100 bases:

>100_bases
CAGCGCATCCTGGACCACCTGGGGCTTCCCGGGAAGCGCGCCCCCCGGTGGGGGGAAACGTGACGCTTTTTTGCCGACCT
GCGATGTTACGATAGGGAGG

Downstream 100 bases:

>100_bases
CGCGCCCCGCCCTTCTCCCTTAGGGTGGAAAGGGTATGGTCCGCCGCCTCCTCGCCCTTTCCCGCCCCCTCTACTGGCTT
TACGAGAAACGCCTCCTGAG

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MTLTQEQRLVLDAVRRVAREVLYPLAPEYDRKAEYPWPQLKALAELGLLGMTTPEEWGGVGLDSVTWALALEELAAADPS
VAVIVSVTSGLPQYMLLRFGSEAQKRRYLVPLARGEWIGAFCLTEPQAGSDAKSLRAEARRVKGGFVLNGVKSWITSAGH
AHLYVVMARTEKGISAFLVEKGTPGLSFGRPEEKMGLHAAHTAEVRLEEVFVPEENLLGEEGRGLAYALAGLDSGRVGVA
AQAVGIARGAFEIAKAYAEEREQFGKKLKEHQAIAFKIADMHVKIAAARALVLEAARKKDRGERFTLEASAAKLFASAAA
VEVTREAVQVLGGYGYHRDYRVERYYRDAKVTEIYEGTSEIQRLVIARELYR

Sequences:

>Translated_372_residues
MTLTQEQRLVLDAVRRVAREVLYPLAPEYDRKAEYPWPQLKALAELGLLGMTTPEEWGGVGLDSVTWALALEELAAADPS
VAVIVSVTSGLPQYMLLRFGSEAQKRRYLVPLARGEWIGAFCLTEPQAGSDAKSLRAEARRVKGGFVLNGVKSWITSAGH
AHLYVVMARTEKGISAFLVEKGTPGLSFGRPEEKMGLHAAHTAEVRLEEVFVPEENLLGEEGRGLAYALAGLDSGRVGVA
AQAVGIARGAFEIAKAYAEEREQFGKKLKEHQAIAFKIADMHVKIAAARALVLEAARKKDRGERFTLEASAAKLFASAAA
VEVTREAVQVLGGYGYHRDYRVERYYRDAKVTEIYEGTSEIQRLVIARELYR
>Mature_371_residues
TLTQEQRLVLDAVRRVAREVLYPLAPEYDRKAEYPWPQLKALAELGLLGMTTPEEWGGVGLDSVTWALALEELAAADPSV
AVIVSVTSGLPQYMLLRFGSEAQKRRYLVPLARGEWIGAFCLTEPQAGSDAKSLRAEARRVKGGFVLNGVKSWITSAGHA
HLYVVMARTEKGISAFLVEKGTPGLSFGRPEEKMGLHAAHTAEVRLEEVFVPEENLLGEEGRGLAYALAGLDSGRVGVAA
QAVGIARGAFEIAKAYAEEREQFGKKLKEHQAIAFKIADMHVKIAAARALVLEAARKKDRGERFTLEASAAKLFASAAAV
EVTREAVQVLGGYGYHRDYRVERYYRDAKVTEIYEGTSEIQRLVIARELYR

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=375, Percent_Identity=45.0666666666667, Blast_Score=319, Evalue=2e-87,
Organism=Homo sapiens, GI4501859, Length=374, Percent_Identity=40.9090909090909, Blast_Score=296, Evalue=2e-80,
Organism=Homo sapiens, GI4557231, Length=375, Percent_Identity=40.8, Blast_Score=274, Evalue=1e-73,
Organism=Homo sapiens, GI187960098, Length=375, Percent_Identity=40.8, Blast_Score=273, Evalue=1e-73,
Organism=Homo sapiens, GI7656849, Length=378, Percent_Identity=36.5079365079365, Blast_Score=255, Evalue=4e-68,
Organism=Homo sapiens, GI226958412, Length=378, Percent_Identity=35.978835978836, Blast_Score=250, Evalue=2e-66,
Organism=Homo sapiens, GI226958414, Length=335, Percent_Identity=36.7164179104478, Blast_Score=236, Evalue=2e-62,
Organism=Homo sapiens, GI21361497, Length=351, Percent_Identity=38.1766381766382, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI4557235, Length=378, Percent_Identity=37.8306878306878, Blast_Score=235, Evalue=6e-62,
Organism=Homo sapiens, GI76496475, Length=378, Percent_Identity=37.8306878306878, Blast_Score=235, Evalue=6e-62,
Organism=Homo sapiens, GI4503943, Length=371, Percent_Identity=34.7708894878706, Blast_Score=198, Evalue=8e-51,
Organism=Homo sapiens, GI4501857, Length=375, Percent_Identity=32.2666666666667, Blast_Score=193, Evalue=2e-49,
Organism=Homo sapiens, GI7669494, Length=357, Percent_Identity=34.733893557423, Blast_Score=186, Evalue=2e-47,
Organism=Homo sapiens, GI211971008, Length=330, Percent_Identity=33.3333333333333, Blast_Score=150, Evalue=2e-36,
Organism=Homo sapiens, GI48976061, Length=330, Percent_Identity=33.3333333333333, Blast_Score=150, Evalue=3e-36,
Organism=Homo sapiens, GI38505218, Length=353, Percent_Identity=32.0113314447592, Blast_Score=141, Evalue=1e-33,
Organism=Escherichia coli, GI87081958, Length=384, Percent_Identity=34.6354166666667, Blast_Score=198, Evalue=4e-52,
Organism=Escherichia coli, GI1786223, Length=374, Percent_Identity=33.1550802139037, Blast_Score=184, Evalue=9e-48,
Organism=Escherichia coli, GI87082384, Length=272, Percent_Identity=30.5147058823529, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI87081702, Length=363, Percent_Identity=26.1707988980716, Blast_Score=80, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17508101, Length=371, Percent_Identity=40.9703504043127, Blast_Score=294, Evalue=5e-80,
Organism=Caenorhabditis elegans, GI17506239, Length=371, Percent_Identity=38.8140161725067, Blast_Score=285, Evalue=2e-77,
Organism=Caenorhabditis elegans, GI17569725, Length=385, Percent_Identity=36.6233766233766, Blast_Score=263, Evalue=1e-70,
Organism=Caenorhabditis elegans, GI17534899, Length=378, Percent_Identity=36.2433862433862, Blast_Score=257, Evalue=7e-69,
Organism=Caenorhabditis elegans, GI17570075, Length=376, Percent_Identity=36.1702127659575, Blast_Score=251, Evalue=3e-67,
Organism=Caenorhabditis elegans, GI17538396, Length=379, Percent_Identity=35.3562005277045, Blast_Score=243, Evalue=1e-64,
Organism=Caenorhabditis elegans, GI17533517, Length=369, Percent_Identity=34.9593495934959, Blast_Score=238, Evalue=5e-63,
Organism=Caenorhabditis elegans, GI71985184, Length=381, Percent_Identity=34.6456692913386, Blast_Score=215, Evalue=3e-56,
Organism=Caenorhabditis elegans, GI71990804, Length=293, Percent_Identity=37.542662116041, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI17534353, Length=373, Percent_Identity=31.3672922252011, Blast_Score=191, Evalue=6e-49,
Organism=Caenorhabditis elegans, GI32563615, Length=231, Percent_Identity=38.5281385281385, Blast_Score=186, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI71985192, Length=328, Percent_Identity=33.5365853658537, Blast_Score=174, Evalue=5e-44,
Organism=Caenorhabditis elegans, GI17551932, Length=371, Percent_Identity=28.5714285714286, Blast_Score=173, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI71982178, Length=271, Percent_Identity=32.8413284132841, Blast_Score=167, Evalue=7e-42,
Organism=Caenorhabditis elegans, GI17505929, Length=365, Percent_Identity=28.4931506849315, Blast_Score=165, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI17531909, Length=239, Percent_Identity=32.6359832635983, Blast_Score=131, Evalue=5e-31,
Organism=Caenorhabditis elegans, GI17531913, Length=177, Percent_Identity=35.0282485875706, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17562446, Length=358, Percent_Identity=27.3743016759777, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI86563383, Length=279, Percent_Identity=28.673835125448, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI86563381, Length=279, Percent_Identity=28.673835125448, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI21356377, Length=375, Percent_Identity=44.2666666666667, Blast_Score=318, Evalue=3e-87,
Organism=Drosophila melanogaster, GI24646207, Length=375, Percent_Identity=41.8666666666667, Blast_Score=285, Evalue=5e-77,
Organism=Drosophila melanogaster, GI24666513, Length=371, Percent_Identity=38.2749326145553, Blast_Score=275, Evalue=5e-74,
Organism=Drosophila melanogaster, GI24660351, Length=377, Percent_Identity=39.7877984084881, Blast_Score=272, Evalue=3e-73,
Organism=Drosophila melanogaster, GI281363737, Length=382, Percent_Identity=35.6020942408377, Blast_Score=227, Evalue=1e-59,
Organism=Drosophila melanogaster, GI21355753, Length=377, Percent_Identity=35.8090185676393, Blast_Score=223, Evalue=1e-58,
Organism=Drosophila melanogaster, GI19920834, Length=373, Percent_Identity=34.0482573726542, Blast_Score=184, Evalue=6e-47,
Organism=Drosophila melanogaster, GI221473076, Length=342, Percent_Identity=24.8538011695906, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI45550141, Length=342, Percent_Identity=24.8538011695906, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40875; Mature: 40744

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTQEQRLVLDAVRRVAREVLYPLAPEYDRKAEYPWPQLKALAELGLLGMTTPEEWGGV
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHCCC
GLDSVTWALALEELAAADPSVAVIVSVTSGLPQYMLLRFGSEAQKRRYLVPLARGEWIGA
CHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHCCCHHHHCEEEEEECCCCEEEE
FCLTEPQAGSDAKSLRAEARRVKGGFVLNGVKSWITSAGHAHLYVVMARTEKGISAFLVE
EEECCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEE
KGTPGLSFGRPEEKMGLHAAHTAEVRLEEVFVPEENLLGEEGRGLAYALAGLDSGRVGVA
CCCCCCCCCCCHHHHCCCCHHHHHEEEEHEECCCHHCCCCCCCCEEEEEECCCCCCCCHH
AQAVGIARGAFEIAKAYAEEREQFGKKLKEHQAIAFKIADMHVKIAAARALVLEAARKKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHCC
RGERFTLEASAAKLFASAAAVEVTREAVQVLGGYGYHRDYRVERYYRDAKVTEIYEGTSE
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHCCHHH
IQRLVIARELYR
HHHHHHHHHHCC
>Mature Secondary Structure 
TLTQEQRLVLDAVRRVAREVLYPLAPEYDRKAEYPWPQLKALAELGLLGMTTPEEWGGV
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHCCC
GLDSVTWALALEELAAADPSVAVIVSVTSGLPQYMLLRFGSEAQKRRYLVPLARGEWIGA
CHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHCCCHHHHCEEEEEECCCCEEEE
FCLTEPQAGSDAKSLRAEARRVKGGFVLNGVKSWITSAGHAHLYVVMARTEKGISAFLVE
EEECCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEE
KGTPGLSFGRPEEKMGLHAAHTAEVRLEEVFVPEENLLGEEGRGLAYALAGLDSGRVGVA
CCCCCCCCCCCHHHHCCCCHHHHHEEEEHEECCCHHCCCCCCCCEEEEEECCCCCCCCHH
AQAVGIARGAFEIAKAYAEEREQFGKKLKEHQAIAFKIADMHVKIAAARALVLEAARKKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHCC
RGERFTLEASAAKLFASAAAVEVTREAVQVLGGYGYHRDYRVERYYRDAKVTEIYEGTSE
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHCCHHH
IQRLVIARELYR
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]