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The map label for this gene is ubiX [C]

Identifier: 55981886

GI number: 55981886

Start: 1798606

End: 1799172

Strand: Reverse

Name: ubiX [C]

Synonym: TTHA1917

Alternate gene names: 55981886

Gene position: 1799172-1798606 (Counterclockwise)

Preceding gene: 55981887

Following gene: 55981885

Centisome position: 97.27

GC content: 71.25

Gene sequence:

>567_bases
GTGGACGCGCCTTTCCGGGTGGTGGTGGGGGTTTCCGGGGCGAGCGGCATGCCCTACGCCCTGGACCTCCTCGAGGCGCT
CAAGGACCTCGCCGAAGTCCACCTCGTCCTCTCCCAGGGGGCCAAGCGGGTGCTCTGGGAGGAGATGGGCTTAAGCCCCA
AGGACCTCCACGCCCTGGCCCACCGGGTCTACAAGGACCAGGACCTGGGCGCCCCCATCGCCTCGGGCTCCTTCCCCACC
CGCGGGATGGTGGTCGTCCCTTGCTCCGCCACCACCCTGGCCAAGGTGGCCACGGGCCTGGCCGACACCCTCCTCACCCG
GGCGGCCTACGTCCACCTGAAGGAGCGCCGCCCCCTCGTCCTCGTCCTGAGGGAGACCCCTTTGCCCCTCCCCACCCTAA
GGGCCATGGTCCAGGCGGCGGAGGCCGGGGCCACCATCCTCCCGGCAAGCCCCGGTTTCTACCACCGCCCCAAGGAGATC
AGGGACCTCCTCGGCTTCGTCACCCAGCGCATCCTGGACCACCTGGGGCTTCCCGGGAAGCGCGCCCCCCGGTGGGGGGA
AACGTGA

Upstream 100 bases:

>100_bases
GGGCCTCGCCTTCCCCTGGAGGCGGAGCTTTGAGGCCTGGCCCGAGCTCGCCCTGGTGCCCCGCCGGGCGGGCCCCGCCT
TGGGCCGGTAGAATGGCGCC

Downstream 100 bases:

>100_bases
CGCTTTTTTGCCGACCTGCGATGTTACGATAGGGAGGATGACCCTCACCCAGGAGCAACGGCTGGTTCTGGACGCGGTGC
GCCGGGTGGCCCGGGAGGTC

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MDAPFRVVVGVSGASGMPYALDLLEALKDLAEVHLVLSQGAKRVLWEEMGLSPKDLHALAHRVYKDQDLGAPIASGSFPT
RGMVVVPCSATTLAKVATGLADTLLTRAAYVHLKERRPLVLVLRETPLPLPTLRAMVQAAEAGATILPASPGFYHRPKEI
RDLLGFVTQRILDHLGLPGKRAPRWGET

Sequences:

>Translated_188_residues
MDAPFRVVVGVSGASGMPYALDLLEALKDLAEVHLVLSQGAKRVLWEEMGLSPKDLHALAHRVYKDQDLGAPIASGSFPT
RGMVVVPCSATTLAKVATGLADTLLTRAAYVHLKERRPLVLVLRETPLPLPTLRAMVQAAEAGATILPASPGFYHRPKEI
RDLLGFVTQRILDHLGLPGKRAPRWGET
>Mature_188_residues
MDAPFRVVVGVSGASGMPYALDLLEALKDLAEVHLVLSQGAKRVLWEEMGLSPKDLHALAHRVYKDQDLGAPIASGSFPT
RGMVVVPCSATTLAKVATGLADTLLTRAAYVHLKERRPLVLVLRETPLPLPTLRAMVQAAEAGATILPASPGFYHRPKEI
RDLLGFVTQRILDHLGLPGKRAPRWGET

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=184, Percent_Identity=48.9130434782609, Blast_Score=169, Evalue=1e-43,
Organism=Saccharomyces cerevisiae, GI6320746, Length=183, Percent_Identity=44.2622950819672, Blast_Score=150, Evalue=1e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.- [C]

Molecular weight: Translated: 20312; Mature: 20312

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAPFRVVVGVSGASGMPYALDLLEALKDLAEVHLVLSQGAKRVLWEEMGLSPKDLHALA
CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHH
HRVYKDQDLGAPIASGSFPTRGMVVVPCSATTLAKVATGLADTLLTRAAYVHLKERRPLV
HHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LVLRETPLPLPTLRAMVQAAEAGATILPASPGFYHRPKEIRDLLGFVTQRILDHLGLPGK
EEECCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
RAPRWGET
CCCCCCCC
>Mature Secondary Structure
MDAPFRVVVGVSGASGMPYALDLLEALKDLAEVHLVLSQGAKRVLWEEMGLSPKDLHALA
CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHH
HRVYKDQDLGAPIASGSFPTRGMVVVPCSATTLAKVATGLADTLLTRAAYVHLKERRPLV
HHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LVLRETPLPLPTLRAMVQAAEAGATILPASPGFYHRPKEIRDLLGFVTQRILDHLGLPGK
EEECCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
RAPRWGET
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]