| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981875
Identifier: 55981875
GI number: 55981875
Start: 1791417
End: 1791737
Strand: Reverse
Name: 55981875
Synonym: TTHA1906
Alternate gene names: NA
Gene position: 1791737-1791417 (Counterclockwise)
Preceding gene: 55981876
Following gene: 55981874
Centisome position: 96.86
GC content: 68.85
Gene sequence:
>321_bases ATGACCTTGCGGGAAGCGGTGGAGCGTTTGGTGGCGGCCTTGGCGCCCGAGGAGGTCTGGCTCTTCGGCTCTTGGGCCCG GGGGGAGGCCGGGCCGGACTCGGACGTGGACCTCCTGGTGGTGGTGCCCTACGAAGGGGACCCTAAGGAGCTCGCCCTTC GCGGGTACAGGGCCCTGAGGGGGCGGGGCTTTCCCCTGGACCTCTTGGTCTACCCCCGTGCCCTCGTGGAGCAGAGGCTC GGGGAGGGGAGCCTTCTTCTCCGGGAGATTTTCCGGGAAGGGCGGTGCCTCTATGCGCGGGGAAGCGGAAAGGTGGCTTA G
Upstream 100 bases:
>100_bases TCAACGAGGTGAACCACACCATGGAGTTCAAGAACTCCGTGCACACCACCGGGGTGGACATCCCGGGGGAAATTCTGAAG TACGCGTGGAGCCTAGCCTC
Downstream 100 bases:
>100_bases GCGGGCCCTCGAGGACCTTGACGCGGCCTTCTCCCTGGAGGCCTCCCGCCACCCCGATGTCCTGGCCTTTCTGGCGCAAC AGGCGGTGGAAAAGGCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MTLREAVERLVAALAPEEVWLFGSWARGEAGPDSDVDLLVVVPYEGDPKELALRGYRALRGRGFPLDLLVYPRALVEQRL GEGSLLLREIFREGRCLYARGSGKVA
Sequences:
>Translated_106_residues MTLREAVERLVAALAPEEVWLFGSWARGEAGPDSDVDLLVVVPYEGDPKELALRGYRALRGRGFPLDLLVYPRALVEQRL GEGSLLLREIFREGRCLYARGSGKVA >Mature_105_residues TLREAVERLVAALAPEEVWLFGSWARGEAGPDSDVDLLVVVPYEGDPKELALRGYRALRGRGFPLDLLVYPRALVEQRLG EGSLLLREIFREGRCLYARGSGKVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11770; Mature: 11639
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLREAVERLVAALAPEEVWLFGSWARGEAGPDSDVDLLVVVPYEGDPKELALRGYRALR CCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHC GRGFPLDLLVYPRALVEQRLGEGSLLLREIFREGRCLYARGSGKVA CCCCCCHHHHCCHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCCCC >Mature Secondary Structure TLREAVERLVAALAPEEVWLFGSWARGEAGPDSDVDLLVVVPYEGDPKELALRGYRALR CHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHC GRGFPLDLLVYPRALVEQRLGEGSLLLREIFREGRCLYARGSGKVA CCCCCCHHHHCCHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA