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The map label for this gene is 55981874

Identifier: 55981874

GI number: 55981874

Start: 1791074

End: 1791445

Strand: Reverse

Name: 55981874

Synonym: TTHA1905

Alternate gene names: NA

Gene position: 1791445-1791074 (Counterclockwise)

Preceding gene: 55981875

Following gene: 55981873

Centisome position: 96.85

GC content: 65.05

Gene sequence:

>372_bases
ATGCGCGGGGAAGCGGAAAGGTGGCTTAGGCGGGCCCTCGAGGACCTTGACGCGGCCTTCTCCCTGGAGGCCTCCCGCCA
CCCCGATGTCCTGGCCTTTCTGGCGCAACAGGCGGTGGAAAAGGCGCTGAAGGCCGTCTGGGTGCAGCTTGGCCTCCTTC
CGCCCCGCACCCACGACCTGGCCTACCTTTGGGAAGAGGTGGAGGATAAGGTGAAGGCGTCCTTGAACCCCGACCATCTG
GACTTTCTGACCCGCTTTGGCGTGCAGGCCCGCTACCCTGACCTGGAAGTTCTGCCGGAAGAGGCCCGGGAAGCCCTTTC
CCTGGCCCAAGTCCTGGTGGCGGAGCTTAGGAGGTGGCTCCATGACCGGTAA

Upstream 100 bases:

>100_bases
CCCCTGGACCTCTTGGTCTACCCCCGTGCCCTCGTGGAGCAGAGGCTCGGGGAGGGGAGCCTTCTTCTCCGGGAGATTTT
CCGGGAAGGGCGGTGCCTCT

Downstream 100 bases:

>100_bases
GAAAACCCTTTCCATCGTGGGGGCCTCGGGGTACGCCGGGGGAGAGTTCCTGAGGCTCGCCCTTTCCCACCCCTATCTGG
AAGTGAAGCAGGTGACCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MRGEAERWLRRALEDLDAAFSLEASRHPDVLAFLAQQAVEKALKAVWVQLGLLPPRTHDLAYLWEEVEDKVKASLNPDHL
DFLTRFGVQARYPDLEVLPEEAREALSLAQVLVAELRRWLHDR

Sequences:

>Translated_123_residues
MRGEAERWLRRALEDLDAAFSLEASRHPDVLAFLAQQAVEKALKAVWVQLGLLPPRTHDLAYLWEEVEDKVKASLNPDHL
DFLTRFGVQARYPDLEVLPEEAREALSLAQVLVAELRRWLHDR
>Mature_123_residues
MRGEAERWLRRALEDLDAAFSLEASRHPDVLAFLAQQAVEKALKAVWVQLGLLPPRTHDLAYLWEEVEDKVKASLNPDHL
DFLTRFGVQARYPDLEVLPEEAREALSLAQVLVAELRRWLHDR

Specific function: Unknown

COG id: COG2250

COG function: function code S; Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14207; Mature: 14207

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS50910 HEPN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGEAERWLRRALEDLDAAFSLEASRHPDVLAFLAQQAVEKALKAVWVQLGLLPPRTHDL
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
AYLWEEVEDKVKASLNPDHLDFLTRFGVQARYPDLEVLPEEAREALSLAQVLVAELRRWL
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHH
HDR
CCC
>Mature Secondary Structure
MRGEAERWLRRALEDLDAAFSLEASRHPDVLAFLAQQAVEKALKAVWVQLGLLPPRTHDL
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
AYLWEEVEDKVKASLNPDHLDFLTRFGVQARYPDLEVLPEEAREALSLAQVLVAELRRWL
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHH
HDR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA