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The map label for this gene is sufB [H]

Identifier: 55981808

GI number: 55981808

Start: 1723430

End: 1724836

Strand: Direct

Name: sufB [H]

Synonym: TTHA1839

Alternate gene names: 55981808

Gene position: 1723430-1724836 (Clockwise)

Preceding gene: 55981807

Following gene: 55981809

Centisome position: 93.17

GC content: 64.68

Gene sequence:

>1407_bases
ATGAGCGAGCTGGAGATCCGCCAGATCGGCGAGGAGTACCGCTGGCACTTCATTGACGAGATCCGGCCCGTCTTCAAGGC
GGAAAAGGGGCTCACCCGCAGGGTGATTGAGGCCATCAGCTACCACAAGGGCGAGCCCGAGTGGATGCTGAAGTTCCGCC
TGCGGGCCTTTGAGATCTTCCAGAAGAAGCCCATGCCCACGTGGGGCCCCGACCTCTCCGGGCTCAACCTGGACGACCTC
GTCTACTACGTGAAGCCCGCCGAGGTCCGGGACGCCAAGAGCTGGGAGGAGGTCCCCGAGGAGATCCGCCGGACCTACGA
GCGCCTGGGCATCCCCGAGGCGGAGCGCAAGGTCTTGGCCGGGGTGGGGGCCCAGTACGACTCGGAGATGGTCTACCACC
GGGTCAGGGAGGAGCTTGAGCGCCAGGGGGTCATCTTCGTGGCCATTGAGGAGGGGATGAAGAAGTACGAGGACCTCTTC
AAGGAGTACTTCGCCAAGGTCGTCCCCCCCGAGGACAACAAGTTCGCCGCCCTGAACTCGGCCGCCTGGTCCGGGGGCTC
CTTCGTCTACGTGCCCCCTGGGGTCAAGGTGGAGCTCCCCCTGCAGGCCTACTTCCGGGTGAACACCCCCGAGTTCGGCC
AGTTTGAGCGCACCCTCATCATCGTGGACGAGGGGGCCGAGGTGCACTACATTGAGGGGTGCACCGCCCCCATGTACTCC
ACGGAAAGCCTCCACACGGGCGTGATTGAGATCGTGGTGAAGCGGGGAGCGCGGAGCCGCTACACCACCATCCAGAACTG
GTCCACCAACATGTACAACCTGGTGACCCAGCGGGCCCTGGTCTACGGGGACGCCTACCACGAGTGGGTGGACGGCAACC
TGGGCTCCAAGGTCACCATGAAGTACCCCTCCAGCTACCTCCTGGAGCCGGGGGCGAGGAGCGAGATCCTCTCCATCGCC
TTCGCCAAGACGGGCCAGCACCAGGACACGGGCGGCAAGCTCATCCTGGCCGCGCCCCACACCTCCGGGACCATCGTCTC
CAAGAGCATCTCCAAGGGGAAGGGGCGGGCGAGCTACCGCGGCCTGGTGAAGGTGATGGAAGGGGCCCGGCACGGTAAGG
TCAACGTGGAGTGCGACGCCCTCCTCATTGACCCCGAAAGCCGCACCGACACCTACCCCTACATTGAGATTGAGGAGGAG
ACCGCCCACGTGGGCCACGAGGCCACGGTCTCCAAGATCAACGACGAGCAGATCTTCTACCTCCAGTCCCGCGGCCTGAA
GGAGGACGAGGCCGCGGCCCTCATCGTGCGCGGCTTCATTGAGCCCATCGCCAAGGAACTTCCCCTGGAGTACGCCGTGG
AGCTCAACAAGCTCATTGAGCTGGAGATGGAGGGCTCCGTCGGCTAA

Upstream 100 bases:

>100_bases
TGATGGACGGCCGGGTGGTGGCCACGGGCGGCCCCGAGCTCGCCCTGGAGCTCGAGGCCAAGGGGTACGAGTGGCTTAAG
GAGAAGGTGAAGGAGGGCGC

Downstream 100 bases:

>100_bases
AGGCCGAGCCTTGGGGGAGGCCCTGGGCCTCCCCCTTTTTTCGGGAGGAAGCATGCAGGTACTGGACAAGACGCAGGTGG
AGGCCGTCTCCAAGGCCCTG

Product: SufB protein membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 467

Protein sequence:

>468_residues
MSELEIRQIGEEYRWHFIDEIRPVFKAEKGLTRRVIEAISYHKGEPEWMLKFRLRAFEIFQKKPMPTWGPDLSGLNLDDL
VYYVKPAEVRDAKSWEEVPEEIRRTYERLGIPEAERKVLAGVGAQYDSEMVYHRVREELERQGVIFVAIEEGMKKYEDLF
KEYFAKVVPPEDNKFAALNSAAWSGGSFVYVPPGVKVELPLQAYFRVNTPEFGQFERTLIIVDEGAEVHYIEGCTAPMYS
TESLHTGVIEIVVKRGARSRYTTIQNWSTNMYNLVTQRALVYGDAYHEWVDGNLGSKVTMKYPSSYLLEPGARSEILSIA
FAKTGQHQDTGGKLILAAPHTSGTIVSKSISKGKGRASYRGLVKVMEGARHGKVNVECDALLIDPESRTDTYPYIEIEEE
TAHVGHEATVSKINDEQIFYLQSRGLKEDEAAALIVRGFIEPIAKELPLEYAVELNKLIELEMEGSVG

Sequences:

>Translated_468_residues
MSELEIRQIGEEYRWHFIDEIRPVFKAEKGLTRRVIEAISYHKGEPEWMLKFRLRAFEIFQKKPMPTWGPDLSGLNLDDL
VYYVKPAEVRDAKSWEEVPEEIRRTYERLGIPEAERKVLAGVGAQYDSEMVYHRVREELERQGVIFVAIEEGMKKYEDLF
KEYFAKVVPPEDNKFAALNSAAWSGGSFVYVPPGVKVELPLQAYFRVNTPEFGQFERTLIIVDEGAEVHYIEGCTAPMYS
TESLHTGVIEIVVKRGARSRYTTIQNWSTNMYNLVTQRALVYGDAYHEWVDGNLGSKVTMKYPSSYLLEPGARSEILSIA
FAKTGQHQDTGGKLILAAPHTSGTIVSKSISKGKGRASYRGLVKVMEGARHGKVNVECDALLIDPESRTDTYPYIEIEEE
TAHVGHEATVSKINDEQIFYLQSRGLKEDEAAALIVRGFIEPIAKELPLEYAVELNKLIELEMEGSVG
>Mature_467_residues
SELEIRQIGEEYRWHFIDEIRPVFKAEKGLTRRVIEAISYHKGEPEWMLKFRLRAFEIFQKKPMPTWGPDLSGLNLDDLV
YYVKPAEVRDAKSWEEVPEEIRRTYERLGIPEAERKVLAGVGAQYDSEMVYHRVREELERQGVIFVAIEEGMKKYEDLFK
EYFAKVVPPEDNKFAALNSAAWSGGSFVYVPPGVKVELPLQAYFRVNTPEFGQFERTLIIVDEGAEVHYIEGCTAPMYST
ESLHTGVIEIVVKRGARSRYTTIQNWSTNMYNLVTQRALVYGDAYHEWVDGNLGSKVTMKYPSSYLLEPGARSEILSIAF
AKTGQHQDTGGKLILAAPHTSGTIVSKSISKGKGRASYRGLVKVMEGARHGKVNVECDALLIDPESRTDTYPYIEIEEET
AHVGHEATVSKINDEQIFYLQSRGLKEDEAAALIVRGFIEPIAKELPLEYAVELNKLIELEMEGSVG

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=461, Percent_Identity=39.0455531453362, Blast_Score=346, Evalue=2e-96,
Organism=Escherichia coli, GI1787971, Length=102, Percent_Identity=35.2941176470588, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 53104; Mature: 52973

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELEIRQIGEEYRWHFIDEIRPVFKAEKGLTRRVIEAISYHKGEPEWMLKFRLRAFEIF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
QKKPMPTWGPDLSGLNLDDLVYYVKPAEVRDAKSWEEVPEEIRRTYERLGIPEAERKVLA
HCCCCCCCCCCCCCCCHHHEEEEECCCHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
GVGAQYDSEMVYHRVREELERQGVIFVAIEEGMKKYEDLFKEYFAKVVPPEDNKFAALNS
HCCCCCHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
AAWSGGSFVYVPPGVKVELPLQAYFRVNTPEFGQFERTLIIVDEGAEVHYIEGCTAPMYS
CCCCCCCEEEECCCCEEEECCEEEEEECCCCCCCCCEEEEEEECCCCEEEECCCCCCCCC
TESLHTGVIEIVVKRGARSRYTTIQNWSTNMYNLVTQRALVYGDAYHEWVDGNLGSKVTM
CCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEE
KYPSSYLLEPGARSEILSIAFAKTGQHQDTGGKLILAAPHTSGTIVSKSISKGKGRASYR
ECCCCCEECCCCHHHHHEEEECCCCCCCCCCCEEEEECCCCCCCEEEHHHHCCCCCHHHH
GLVKVMEGARHGKVNVECDALLIDPESRTDTYPYIEIEEETAHVGHEATVSKINDEQIFY
HHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCEEEEECCHHHCCCHHHHHCCCCCEEEE
LQSRGLKEDEAAALIVRGFIEPIAKELPLEYAVELNKLIELEMEGSVG
EECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCC
>Mature Secondary Structure 
SELEIRQIGEEYRWHFIDEIRPVFKAEKGLTRRVIEAISYHKGEPEWMLKFRLRAFEIF
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
QKKPMPTWGPDLSGLNLDDLVYYVKPAEVRDAKSWEEVPEEIRRTYERLGIPEAERKVLA
HCCCCCCCCCCCCCCCHHHEEEEECCCHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
GVGAQYDSEMVYHRVREELERQGVIFVAIEEGMKKYEDLFKEYFAKVVPPEDNKFAALNS
HCCCCCHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
AAWSGGSFVYVPPGVKVELPLQAYFRVNTPEFGQFERTLIIVDEGAEVHYIEGCTAPMYS
CCCCCCCEEEECCCCEEEECCEEEEEECCCCCCCCCEEEEEEECCCCEEEECCCCCCCCC
TESLHTGVIEIVVKRGARSRYTTIQNWSTNMYNLVTQRALVYGDAYHEWVDGNLGSKVTM
CCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEE
KYPSSYLLEPGARSEILSIAFAKTGQHQDTGGKLILAAPHTSGTIVSKSISKGKGRASYR
ECCCCCEECCCCHHHHHEEEECCCCCCCCCCCEEEEECCCCCCCEEEHHHHCCCCCHHHH
GLVKVMEGARHGKVNVECDALLIDPESRTDTYPYIEIEEETAHVGHEATVSKINDEQIFY
HHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCEEEEECCHHHCCCHHHHHCCCCCEEEE
LQSRGLKEDEAAALIVRGFIEPIAKELPLEYAVELNKLIELEMEGSVG
EECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]