Click here to switch to the map view.

The map label for this gene is yrrL [H]

Identifier: 55981797

GI number: 55981797

Start: 1710025

End: 1711008

Strand: Reverse

Name: yrrL [H]

Synonym: TTHA1828

Alternate gene names: 55981797

Gene position: 1711008-1710025 (Counterclockwise)

Preceding gene: 55981798

Following gene: 55981794

Centisome position: 92.5

GC content: 71.14

Gene sequence:

>984_bases
GTGGTGGCCCTCTTCCTCACCTTCCTCCTCCTCCTCCTCTACGCCCTCTGGCTTCTCGGCCCCACGGGAAGGGAGGCCGT
GGTGCGCATTCCCCGGGGGGCCACGGGGGCGGAGGTGGCGAGGATTTTGGAGGAGGCGGGGCTTCTGCGCTCGGGCCACG
CCTTTTCCGCCTACCTCCGCTTCTCGGGCCGGGCGAAGCGCCTCGTCCCCGGGGTCTACCGCCTGAAGGGCGAGGGGGCC
TTCCGCCTGGCCCGGGCCCTCACCGGGGGCGTGAAGCCCCTAAGCGTCACCCTCACCTTCCCCGAGGGGGAGAGGGCGGT
GGACTACGCCCGGAGGCTCTCCCAGGCGGGGCTTGACGGGGAGGGCTTCCTCAGGCTCGTGGAACGCCCGGGGGCCCTGA
AGCCCCCCTACGTGGAGGGGCGGACCCTGGAGGGCTACCTCTTCCCCGCCACCTACACCTTTGACCTCCTCGCCACCCCC
GAGGAGGTGGTGCGGGCCATGCTCCGCCGCTTTGAGGCGGAGCTCACCCCCCCGGTGCAGAGGCTTCTAGAGGAGCGGGG
GCTTTCCGTCCACGCCTGGGTCACCCTGGCCTCCATCGTGGAGAAGGAGGCGGGAAGCGCCGAGGAGATGCCCTATATCG
CCGGGGTCTTCCTGAACCGCCTGGAGCGGGGCATGCCCCTCCAGGCCGACCCCACGGTGGCCTACGCCTTGGGGAAGAGG
CTCCCGGAGCTTTCCCGGGAGGCGGGGGACTTCCAGGTGGACTCCCCCTACAACACCTACCGCTACGGCGGCCTTCCCCC
GGGGCCCATCGCCAACCCCGGGCGGAAGGCCCTCCTCGCCGTCTTGAACCCGGTGCGCCAGGACGAAAGGGGCCGCCCCT
ACCTCTACTTCTTCCACGCCCAGGGGCGGCTTTACCTGAACGTGGACTTTGCGGGCCACCTCCGGGACCTCGCCCGCTAC
CGCTACGCCTCCCCGTCCCCGTGA

Upstream 100 bases:

>100_bases
CGGCTTCGCCGGGACAAGGGGAAGCTGGACGAGCTCGCGGCCGTGGTGCTTCTGGAGGACTACCTTGCCCGAGGGATCTA
GGAACTGGCTTCGGCGTGGG

Downstream 100 bases:

>100_bases
CGGAGGAGGCGGAGCTGGGCGTAGGCGAAGAGGAGGGTGAGGACGAGGAGGACCACGGTGATGGCCGCCGCGTACCCCAA
GCGGAAGTTCTCAAACCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MVALFLTFLLLLLYALWLLGPTGREAVVRIPRGATGAEVARILEEAGLLRSGHAFSAYLRFSGRAKRLVPGVYRLKGEGA
FRLARALTGGVKPLSVTLTFPEGERAVDYARRLSQAGLDGEGFLRLVERPGALKPPYVEGRTLEGYLFPATYTFDLLATP
EEVVRAMLRRFEAELTPPVQRLLEERGLSVHAWVTLASIVEKEAGSAEEMPYIAGVFLNRLERGMPLQADPTVAYALGKR
LPELSREAGDFQVDSPYNTYRYGGLPPGPIANPGRKALLAVLNPVRQDERGRPYLYFFHAQGRLYLNVDFAGHLRDLARY
RYASPSP

Sequences:

>Translated_327_residues
MVALFLTFLLLLLYALWLLGPTGREAVVRIPRGATGAEVARILEEAGLLRSGHAFSAYLRFSGRAKRLVPGVYRLKGEGA
FRLARALTGGVKPLSVTLTFPEGERAVDYARRLSQAGLDGEGFLRLVERPGALKPPYVEGRTLEGYLFPATYTFDLLATP
EEVVRAMLRRFEAELTPPVQRLLEERGLSVHAWVTLASIVEKEAGSAEEMPYIAGVFLNRLERGMPLQADPTVAYALGKR
LPELSREAGDFQVDSPYNTYRYGGLPPGPIANPGRKALLAVLNPVRQDERGRPYLYFFHAQGRLYLNVDFAGHLRDLARY
RYASPSP
>Mature_327_residues
MVALFLTFLLLLLYALWLLGPTGREAVVRIPRGATGAEVARILEEAGLLRSGHAFSAYLRFSGRAKRLVPGVYRLKGEGA
FRLARALTGGVKPLSVTLTFPEGERAVDYARRLSQAGLDGEGFLRLVERPGALKPPYVEGRTLEGYLFPATYTFDLLATP
EEVVRAMLRRFEAELTPPVQRLLEERGLSVHAWVTLASIVEKEAGSAEEMPYIAGVFLNRLERGMPLQADPTVAYALGKR
LPELSREAGDFQVDSPYNTYRYGGLPPGPIANPGRKALLAVLNPVRQDERGRPYLYFFHAQGRLYLNVDFAGHLRDLARY
RYASPSP

Specific function: Unknown

COG id: COG1559

COG function: function code R; Predicted periplasmic solute-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0755 family [H]

Homologues:

Organism=Escherichia coli, GI1787339, Length=278, Percent_Identity=32.0143884892086, Blast_Score=114, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003770 [H]

Pfam domain/function: PF02618 ADC_lyase [H]

EC number: NA

Molecular weight: Translated: 36260; Mature: 36260

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVALFLTFLLLLLYALWLLGPTGREAVVRIPRGATGAEVARILEEAGLLRSGHAFSAYLR
CHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEE
FSGRAKRLVPGVYRLKGEGAFRLARALTGGVKPLSVTLTFPEGERAVDYARRLSQAGLDG
ECCCCHHHCCCCEEECCCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCH
EGFLRLVERPGALKPPYVEGRTLEGYLFPATYTFDLLATPEEVVRAMLRRFEAELTPPVQ
HHHHHHHHCCCCCCCCCCCCCEECEEEECCEEEEEEECCHHHHHHHHHHHHHCCCCHHHH
RLLEERGLSVHAWVTLASIVEKEAGSAEEMPYIAGVFLNRLERGMPLQADPTVAYALGKR
HHHHHCCCEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LPELSREAGDFQVDSPYNTYRYGGLPPGPIANPGRKALLAVLNPVRQDERGRPYLYFFHA
CHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEE
QGRLYLNVDFAGHLRDLARYRYASPSP
CCEEEEEEEHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVALFLTFLLLLLYALWLLGPTGREAVVRIPRGATGAEVARILEEAGLLRSGHAFSAYLR
CHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEE
FSGRAKRLVPGVYRLKGEGAFRLARALTGGVKPLSVTLTFPEGERAVDYARRLSQAGLDG
ECCCCHHHCCCCEEECCCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCH
EGFLRLVERPGALKPPYVEGRTLEGYLFPATYTFDLLATPEEVVRAMLRRFEAELTPPVQ
HHHHHHHHCCCCCCCCCCCCCEECEEEECCEEEEEEECCHHHHHHHHHHHHHCCCCHHHH
RLLEERGLSVHAWVTLASIVEKEAGSAEEMPYIAGVFLNRLERGMPLQADPTVAYALGKR
HHHHHCCCEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
LPELSREAGDFQVDSPYNTYRYGGLPPGPIANPGRKALLAVLNPVRQDERGRPYLYFFHA
CHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEE
QGRLYLNVDFAGHLRDLARYRYASPSP
CCEEEEEEEHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]