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The map label for this gene is yqgF [C]

Identifier: 55981798

GI number: 55981798

Start: 1711028

End: 1711435

Strand: Reverse

Name: yqgF [C]

Synonym: TTHA1829

Alternate gene names: 55981798

Gene position: 1711435-1711028 (Counterclockwise)

Preceding gene: 55981799

Following gene: 55981797

Centisome position: 92.52

GC content: 70.34

Gene sequence:

>408_bases
ATGCGGGTGGGCGCGCTTGACGTGGGGGAGGCCCGGATCGGCCTCGCCGTGGGGGAGGAGGGGGTCCCCTTGGCCTCGGG
CCGGGGGTACCTGGTGCGCAAGACCCTGGAGGAGGACGTGGAGGCCCTCCTGGACTTCGTGCGGCGGGAGGGTTTGGGAA
AGCTCGTGGTGGGCCTCCCCTTGCGCACCGACCTCAAGGAGAGCGCCCAGGCGGGGAAGGTCCTCCCCCTGGTGGAGGCC
TTGAGGGCCAGGGGGGTGGAGGTGGAGCTATGGGACGAGCGCTTCACCACCAAGCTCGCCCAGGAACGCCTCAAGCACGC
CCCCAAGCGGCTTCGCCGGGACAAGGGGAAGCTGGACGAGCTCGCGGCCGTGGTGCTTCTGGAGGACTACCTTGCCCGAG
GGATCTAG

Upstream 100 bases:

>100_bases
CTAAACCGCTTCGGGGTGGCGGGCCTCGAGGAGGCGGGAAGGGCCTTGGGCGTGGGCCTCCTTTACCTGGGGGTCCTTCT
CGCGGACGGGAGCGTGGCCT

Downstream 100 bases:

>100_bases
GAACTGGCTTCGGCGTGGGGTGGTGGCCCTCTTCCTCACCTTCCTCCTCCTCCTCCTCTACGCCCTCTGGCTTCTCGGCC
CCACGGGAAGGGAGGCCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MRVGALDVGEARIGLAVGEEGVPLASGRGYLVRKTLEEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEA
LRARGVEVELWDERFTTKLAQERLKHAPKRLRRDKGKLDELAAVVLLEDYLARGI

Sequences:

>Translated_135_residues
MRVGALDVGEARIGLAVGEEGVPLASGRGYLVRKTLEEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEA
LRARGVEVELWDERFTTKLAQERLKHAPKRLRRDKGKLDELAAVVLLEDYLARGI
>Mature_135_residues
MRVGALDVGEARIGLAVGEEGVPLASGRGYLVRKTLEEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEA
LRARGVEVELWDERFTTKLAQERLKHAPKRLRRDKGKLDELAAVVLLEDYLARGI

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RUVX_THET2 (Q72HK9)

Other databases:

- EMBL:   AE017221
- RefSeq:   YP_005447.1
- ProteinModelPortal:   Q72HK9
- SMR:   Q72HK9
- STRING:   Q72HK9
- GeneID:   2775716
- GenomeReviews:   AE017221_GR
- eggNOG:   COG0816
- HOGENOM:   HBG607919
- OMA:   REDERYT
- ProtClustDB:   CLSK738844
- BioCyc:   TTHE262724:TT_C1478-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00651
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337
- Gene3D:   G3DSA:3.30.420.140
- SMART:   SM00732
- TIGRFAMs:   TIGR00250

Pfam domain/function: PF03652 UPF0081; SSF53098 RNaseH_fold

EC number: NA

Molecular weight: Translated: 14894; Mature: 14894

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVGALDVGEARIGLAVGEEGVPLASGRGYLVRKTLEEDVEALLDFVRREGLGKLVVGLP
CCCCCCCCCCHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
LRTDLKESAQAGKVLPLVEALRARGVEVELWDERFTTKLAQERLKHAPKRLRRDKGKLDE
CCCCHHHHHHCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LAAVVLLEDYLARGI
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MRVGALDVGEARIGLAVGEEGVPLASGRGYLVRKTLEEDVEALLDFVRREGLGKLVVGLP
CCCCCCCCCCHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
LRTDLKESAQAGKVLPLVEALRARGVEVELWDERFTTKLAQERLKHAPKRLRRDKGKLDE
CCCCHHHHHHCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LAAVVLLEDYLARGI
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA