| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is rpoB
Identifier: 55981782
GI number:
Start: 1694259
End: 1697618
Strand: Reverse
Name: rpoB
Synonym: TTHA1813
Alternate gene names: NA
Gene position: NA
Preceding gene: 55981783
Following gene: 55981781
Centisome position: NA
GC content: NA
Gene sequence:
>3360_bases ATGGAGATCAAGCGGTTCGGTCGCATCCGAGAGGTTATCCCCCTTCCACCCCTCACCGAGATCCAGGTGGAGTCCTACCG CAGGGCCCTGCAGGCCGACGTCCCCCCGGAGAAGCGGGAGAACGTCGGCATCCAGGCGGCCTTCCGGGAGACCTTCCCCA TTGAGGAGGAGGACAAGGGCAAGGGCGGTTTGGTGCTGGACTTCCTGGAGTACCGCCTGGGCGAGCCCCCCTTCCCCCAG GACGAGTGCCGGGAGAAGGACCTCACCTACCAGGCCCCCCTCTACGCCCGGCTCCAGCTCATCCACAAGGACACGGGCCT CATCAAGGAGGACGAGGTCTTCCTGGGGCACATCCCCCTGATGACCGAGGACGGCTCCTTCATCATCAACGGGGCCGACC GGGTCATCGTCTCCCAGATCCACCGCTCCCCCGGGGTCTACTTCACCCCCGACCCCGCCCGGCCCGGGCGCTACATCGCC AGCATCATCCCCCTGCCCAAGCGGGGCCCCTGGATTGACCTGGAGGTGGAGCCGAACGGCGTCGTCTCCATGAAGGTCAA CAAGCGGAAGTTCCCCCTGGTCCTCCTCCTTCGGGTCCTGGGGTACGACCAGGAGACCCTGGCCCGGGAGCTTGGGGCCT ACGGGGAGCTGGTCCAGGGCCTCATGGACGAGAGCGTCTTCGCCATGCGCCCCGAGGAGGCTCTGATCCGCCTCTTCACC CTCCTCCGCCCCGGGGACCCGCCCAAGCGGGACAAGGCCGTGGCCTACGTCTACGGCCTCATCGCCGACCCCAGGCGGTA CGACCTGGGCGAGGCCGGGCGGTACAAGGCGGAGGAGAAGCTGGGGATCCGCCTCTCGGGCCGCACCCTGGCCCGCTTTG AGGACGGGGAGTTCAAGGACGAGGTCTTCCTCCCCACCCTCCGCTACCTCTTCGCCCTCACCGCCGGGGTCCCGGGCCAC GAGGTGGACGACATTGACCACCTGGGCAACCGCCGCATCCGCACCGTGGGGGAGCTCATGACCGACCAGTTCCGGGTGGG GCTCGCCCGCCTCGCCCGGGGGGTGCGGGAGCGGATGCTCATGGGCTCGGAGGACAGCCTCACCCCGGCCAAGCTGGTGA ACAGCCGCCCCTTGGAGGCCGCCATCCGGGAGTTCTTCAGCCGCAGCCAGCTTTCCCAGTTCAAGGACGAGACCAACCCC CTCTCCTCCCTGCGCCACAAGCGGCGGATCTCCGCCCTGGGCCCGGGCGGCCTCACCCGGGAGCGGGCGGGGTTTGACGT GCGCGACGTCCACCGCACCCACTACGGGCGCATCTGCCCCGTGGAGACCCCCGAGGGCGCCAACATCGGCCTCATCACCT CCTTGGCGGCCTACGCCCGGGTGGACGAGCTGGGCTTCATCCGCACCCCCTACCGCCGGGTGGTGGGCGGGGTGGTCACC GACGAGGTGGTCTACATGACGGCCACCGAGGAGGACCGCTACACCATCGCCCAGGCCAACACCCCCCTGGAGGGGAACCG GATCGCGGCCGAGCGGGTGGTGGCCCGGAGGAAGGGGGAGCCCGTGATCGTGAGCCCGGAAGAGGTGGAGTTCATGGACG TCTCCCCCAAGCAGGTCTTCTCCGTGAACACCAACCTCATTCCCTTCCTGGAGCACGACGACGCCAACCGGGCCCTCATG GGCTCCAACATGCAGACCCAGGCCGTGCCCCTCATCCGGGCCCAGGCCCCCGTGGTGATGACGGGCCTCGAGGAGCGGGT GGTGCGGGACTCCCTGGCCGCCCTCTACGCCGAGGAGGACGGGGAGGTGGCCAAGGTGGACGGCAACCGCATCGTCGTGC GCTACGAGGACGGCCGCCTGGTGGAGTACCCCTTGCGCCGCTTCTACCGCTCCAACCAGGGTACGGCCCTGGACCAGCGC CCCCGGGTGGTGGTGGGGCAGCGGGTGCGCAAAGGGGACCTCCTCGCCGACGGCCCCGCCTCCGAGAACGGCTTCCTGGC CCTGGGGCAGAACGTCCTCGTGGCCATCATGCCCTTTGACGGGTACAACTTTGAGGACGCCATCGTCATCAGCGAGGAGC TCCTCAAGCGGGACTTCTACACCTCCATCCACATTGAGCGCTACGAGATTGAGGCCCGGGACACCAAGCTTGGCCCCGAG CGGATCACCCGGGACATCCCCCACCTCTCCGAGGCCGCCCTAAGGGACCTGGACGAGGAGGGCGTGGTGCGCATCGGCGC CGAGGTGAAGCCCGGGGACATCCTCGTGGGGCGGACCAGCTTCAAGGGCGAGTCCGAGCCCACCCCCGAGGAGAGGCTCC TCCGCTCCATCTTCGGCGAGAAGGCCCGGGACGTGAAGGACACCTCCCTCCGGGTGCCGCCCGGCGAAGGGGGGATCGTG GTCCGCACCGTCCGGCTGCGGCGGGGCGACCCCGGGGTGGAGCTCAAGCCCGGGGTGCGGGAGGTGGTCCGGGTCTACGT GGCCCAGAAGCGCAAGCTCCAGGTGGGGGACAAGCTCGCCAACCGCCACGGGAACAAGGGGGTGGTGGCCAAGATCCTCC CCGTGGAGGACATGCCCCACCTGCCCGACGGCACCCCCGTGGACGTGATCCTGAACCCCCTGGGCGTCCCCAGCCGGATG AACCTGGGGCAGATCCTGGAGACCCACCTGGGCCTCGCCGGGTACTTCCTGGGCCAGCGCTACATCTCCCCCATCTTTGA CGGGGCCAAGGAGCCCGAGATCAAGGAGCTCCTCGCCCAGGCCTTTGAGGTCTACTTCGGCAAGCGCAAGGGCGAGGGCT TCGGCGTGGACAAGCGGGAGGTGGAGGTCCTCCGCCGGGCGGAGAAGCTCGGCCTCGTCACCCCGGGCAAGACCCCGGAG GAGCAGCTTAAGGAGCTCTTCCTCCAGGGCAAGGTGGTCCTCTACGACGGCCGCACGGGCGAGCCCATTGAGGGCCCCAT CGTGGTGGGACAGATGTTCATCATGAAGCTCTACCACATGGTGGAGGACAAGATGCACGCCCGCTCCACGGGGCCCTACT CCCTCATCACCCAGCAGCCCCTGGGCGGGAAGGCCCAGTTCGGCGGCCAGCGCTTCGGGGAGATGGAGGTCTGGGCCCTC GAGGCCTATGGGGCGGCCCACACCCTCCAGGAGATGCTCACCCTTAAGTCCGACGACATTGAGGGCAGGAACGCCGCCTA CGAGGCCATCATCAAGGGGGAGGACGTTCCCGAGCCCAGCGTCCCCGAGTCCTTCCGCGTGCTGGTGAAGGAGCTCCAGG CCTTGGCCTTGGACGTGCAGACCCTGGACGAGAAGGACAACCCCGTGGACATCTTTGAGGGGTTGGCCTCCAAGCGGTGA
Upstream 100 bases:
>100_bases AAGGGAGCACGGTAAGAGCCAGCCGCCGCAAGGGGATGGCCCCCTTGCGGAAGAACCCTGTTAGCTTACCTCGGGCGGCC CGCCTTCCTTGAGGTGACGC
Downstream 100 bases:
>100_bases GGGTGAAGGCGGTTCCCCCGAGGTGAAGCATGAAAAAAGAGGTTCGTAAGGTTCGCATCGCTTTGGCCTCCCCGGAGAAG ATCCGCTCCTGGAGCTACGG
Product: DNA-directed RNA polymerase subunit beta
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1119_residues MEIKRFGRIREVIPLPPLTEIQVESYRRALQADVPPEKRENVGIQAAFRETFPIEEEDKGKGGLVLDFLEYRLGEPPFPQ DECREKDLTYQAPLYARLQLIHKDTGLIKEDEVFLGHIPLMTEDGSFIINGADRVIVSQIHRSPGVYFTPDPARPGRYIA SIIPLPKRGPWIDLEVEPNGVVSMKVNKRKFPLVLLLRVLGYDQETLARELGAYGELVQGLMDESVFAMRPEEALIRLFT LLRPGDPPKRDKAVAYVYGLIADPRRYDLGEAGRYKAEEKLGIRLSGRTLARFEDGEFKDEVFLPTLRYLFALTAGVPGH EVDDIDHLGNRRIRTVGELMTDQFRVGLARLARGVRERMLMGSEDSLTPAKLVNSRPLEAAIREFFSRSQLSQFKDETNP LSSLRHKRRISALGPGGLTRERAGFDVRDVHRTHYGRICPVETPEGANIGLITSLAAYARVDELGFIRTPYRRVVGGVVT DEVVYMTATEEDRYTIAQANTPLEGNRIAAERVVARRKGEPVIVSPEEVEFMDVSPKQVFSVNTNLIPFLEHDDANRALM GSNMQTQAVPLIRAQAPVVMTGLEERVVRDSLAALYAEEDGEVAKVDGNRIVVRYEDGRLVEYPLRRFYRSNQGTALDQR PRVVVGQRVRKGDLLADGPASENGFLALGQNVLVAIMPFDGYNFEDAIVISEELLKRDFYTSIHIERYEIEARDTKLGPE RITRDIPHLSEAALRDLDEEGVVRIGAEVKPGDILVGRTSFKGESEPTPEERLLRSIFGEKARDVKDTSLRVPPGEGGIV VRTVRLRRGDPGVELKPGVREVVRVYVAQKRKLQVGDKLANRHGNKGVVAKILPVEDMPHLPDGTPVDVILNPLGVPSRM NLGQILETHLGLAGYFLGQRYISPIFDGAKEPEIKELLAQAFEVYFGKRKGEGFGVDKREVEVLRRAEKLGLVTPGKTPE EQLKELFLQGKVVLYDGRTGEPIEGPIVVGQMFIMKLYHMVEDKMHARSTGPYSLITQQPLGGKAQFGGQRFGEMEVWAL EAYGAAHTLQEMLTLKSDDIEGRNAAYEAIIKGEDVPEPSVPESFRVLVKELQALALDVQTLDEKDNPVDIFEGLASKR
Sequences:
NA
Specific function: NA
COG id: COG0085
COG function: function code K; DNA-directed RNA polymerase, beta subunit/140 kD subunit
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA