Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

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Identifier: 55981781

GI number:

Start: 1689655

End: 1694229

Strand: Reverse

Name: Not Available

Synonym: TTHA1812

Alternate gene names: NA

Gene position: NA

Preceding gene: 55981782

Following gene: 55981780

Centisome position: NA

GC content: NA

Gene sequence:

>4575_bases
ATGAAAAAAGAGGTTCGTAAGGTTCGCATCGCTTTGGCCTCCCCGGAGAAGATCCGCTCCTGGAGCTACGGGGAGGTGGA
GAAGCCCGAGACCATCAACTACCGCACCCTCAAGCCCGAGCGGGACGGCCTCTTTGACGAGCGCATCTTCGGCCCCATCA
AGGACTACGAGTGCGCCTGCGGCAAGTACAAGCGCCAGCGCTTTGAGGGCAAGGTGTGCGAGCGGTGTGGCGTGGAGGTG
ACGAAGAGCATCGTCCGCCGCTACCGCATGGGGCACATTGAGCTCGCCACCCCCGCCGCCCACATCTGGTTCGTCAAGGA
CGTCCCCTCCAAGATCGGGACCCTCCTGGACCTTTCCGCCACCGAGCTGGAGCAGGTCCTCTACTTCAGCAAGTACATCG
TCTTGGATCCCAAGGGGGCCATCCTGAACGGGGTCCCGGTGGAGAAGCGCCAGCTCCTCACCGACGAGGAGTACCGGGAG
CTCCGCTACGGCAAGCAGGAGACCTACCCCCTGCCCCCCGGGGTGGACGCGCTGGTGAAGGACGGGGAGGAGGTGGTAAA
GGGCCAGGAGCTTGCCCCCGGGGTGGTGAGCCGCCTGGACGGCGTGGCCCTCTACCGCTTCCCCCGCCGCGTCCGGGTGG
AGTACGTGAAGAAGGAGCGGGCCGGGCTCAGGCTTCCCCTCGCCGCCTGGGTGGAGAAGGAGGCCTACAAGCCCGGCGAA
ATCCTCGCCGAGCTCCCCGAGCCCTACCTCTTCCGGGCCGAGGAGGAGGGCGTGGTGGAGCTTAAGGAGCTGGAGGAAGG
GGCTTTCCTCGTCCTCCGCCGGGAGGACGAGCCGGTGGCCACCTACTTCCTCCCCGTGGGCATGACGCCCCTCGTGGTCC
ACGGGGAGATCGTGGAGAAGGGCCAGCCCCTGGCCGAGGCCAAGGGCCTTCTCCGCATGCCCCGCCAGGTCCGGGCCGCC
CAGGTGGAGGCGGAGGAGGAGGGGGAGACGGTCTACCTCACCCTCTTCCTGGAGTGGACGGAGCCCAAGGACTACCGCGT
CCAGCCCCACATGAACGTGGTGGTCCCCGAGGGGGCCCGGGTGGAGGCGGGGGACAAGATCGTGGCCGCCATTGACCCCG
AGGAGGAGGTCATCGCCGAGGCCGAGGGGGTGGTCCACCTCCACGAGCCCGCCAGCATCCTGGTGGTCAAGGCCCGGGTC
TACCCCTTTGAGGACGACGTGGAGGTTTCCACCGGGGACCGGGTGGCCCCGGGGGACGTCCTCGCCGACGGGGGCAAGGT
CAAAAGCGACGTCTACGGCCGGGTGGAGGTGGACCTGGTCCGCAACGTGGTCCGGGTGGTGGAGTCCTACGACATTGACG
CCCGCATGGGGGCCGAGGCCATCCAGCAGCTCCTCAAGGAGCTGGACCTCGAGGCCCTGGAGAAGGAGCTTCTGGAGGAG
ATGAAGCACCCCTCCCGGGCCCGGCGGGCCAAGGCCAGGAAGCGCCTGGAGGTGGTGCGGGCCTTCCTGGACTCGGGGAA
CCGGCCCGAGTGGATGATCCTCGAGGCCGTCCCCGTCCTTCCCCCGGACCTCCGGCCCATGGTCCAGGTGGACGGCGGCC
GCTTCGCCACGAGCGACCTCAACGACCTCTACCGCCGCCTCATCAACCGCAACAACCGGCTGAAGAAGCTCTTGGCCCAG
GGGGCCCCCGAGATCATCATCCGCAACGAGAAGCGGATGCTCCAGGAGGCGGTGGACGCCCTCCTGGACAACGGCCGCCG
CGGCGCTCCCGTGACCAACCCCGGCTCCGACCGGCCCCTCCGTAGCCTCACCGACATCCTCTCCGGCAAGCAGGGCCGCT
TCCGCCAGAACCTCTTGGGCAAGCGGGTGGACTACTCGGGCCGGAGCGTGATCGTGGTGGGGCCCCAGCTCAAGCTCCAC
CAGTGCGGCCTGCCCAAGCGGATGGCCCTGGAGCTCTTCAAGCCCTTCCTCCTCAAGAAGATGGAGGAGAAGGGCATCGC
CCCCAACGTCAAGGCGGCGCGGCGCATGCTGGAGCGCCAGCGGGACATCAAGGACGAGGTGTGGGACGCCTTGGAGGAGG
TGATCCACGGCAAGGTGGTCCTCTTGAACCGCGCCCCCACCCTGCACCGCTTGGGCATCCAGGCCTTCCAGCCCGTCTTG
GTGGAGGGGCAGTCCATCCAGCTCCACCCCCTGGTCTGCGAGGCCTTCAACGCCGACTTTGACGGGGACCAGATGGCCGT
CCACGTCCCCCTCTCCTCCTTCGCCCAGGCCGAGGCCCGCATCCAGATGCTCTCCGCCCACAACCTCCTCTCCCCGGCCT
CCGGGGAGCCCCTGGCCAAGCCCAGCCGGGACATCATCCTGGGCCTCTACTACATCACCCAGGTGCGCAAGGAGAAGAAG
GGGGCGGGCCTGGAGTTCGCCACCCCCGAGGAGGCCCTGGCCGCCCACGAGCGGGGAGAGGTGGCCCTGAACGCCCCCAT
CAAGGTGGCGGGCAGGGAGACCAGCGTGGGCCGGCTCAAGTACGTCTTCGCCAACCCCGACGAGGCCCTCCTCGCCGTGG
CCCACGGCATCGTGGACCTGCAGGACGTGGTCACCGTCCGCTACATGGGCAAGCGGCTGGAGACGAGCCCGGGCCGCATC
CTCTTCGCCCGCATCGTGGCCGAGGCGGTGGAGGACGAGAAGGTGGCCTGGGAGCTCATCCAGCTGGACGTGCCCCAGGA
GAAGAACTCCCTCAAGGACCTGGTCTACCAGGCCTTCCTCCGCCTGGGGATGGAGAAGACCGCCAGGCTCCTGGACGCCC
TCAAGTACTACGGCTTCACCTTCTCCACCACGAGCGGCATCACCATCGGCATTGACGACGCCGTGATCCCGGAGGAGAAG
AAGCAGTACCTGGAGGAGGCCGACCGCAAGCTCCTCCAGATTGAGCAGGCCTACGAGATGGGCTTCCTCACCGACCGGGA
GCGGTACGACCAGATCCTCCAGCTCTGGACCGAGACCACGGAGAAGGTCACCCAGGCGGTCTTCAAGAACTTTGAGGAGA
ACTACCCCTTCAACCCCCTCTACGTCATGGCCCAGTCCGGGGCCCGGGGCAACCCGCAGCAGATCCGCCAGCTCTGCGGC
CTGCGCGGCCTCATGCAGAAGCCCTCGGGCGAGACCTTTGAGGTGCCGGTGCGCTCCTCCTTCCGCGAGGGCCTCACCGT
CTTGGAGTACTTCATCTCCAGCCACGGGGCCCGTAAGGGCGGGGCGGACACCGCCCTCCGCACCGCCGACTCCGGCTACC
TCACCCGCAAGCTCGTGGACGTGACCCACGAGATCGTGGTGCGGGAGGCGGACTGCGGCACCACCAACTACATCTCCGTT
CCCCTCTTCCAGCCCGACGAGGTGACCCGCTCCTTGCGCCTGAGGAAGCGCGCGGACATTGAGGCGGGCCTCTACGGGCG
CGTCCTGGCCCGGGAGGTGGAGGTCCTGGGGGTGCGCCTCGAGGAGGGCCGCTACCTCTCCATGGACGACGTCCACCTCC
TCATCAAGGCCGCCGAGGCCGGGGAGATCCAGGAGGTGCCCGTCCGCAGCCCCCTCACCTGCCAGACCCGCTACGGGGTC
TGCCAGAAGTGCTACGGGTACGACCTCTCCATGGCCCGGCCCGTCTCCATCGGCGAGGCGGTGGGCATCGTGGCCGCCCA
GTCCATCGGCGAGCCCGGCACCCAGCTCACCATGCGCACCTTCCACACGGGCGGCGTGGCCGGGGCCGCGGACATCACCC
AGGGTCTGCCCCGCGTCATTGAGCTCTTTGAGGCCCGGCGCCCCAAGGCCAAGGCGGTGATCTCCGAGATTGACGGGGTG
GTGCGCATTGAGGAGACGGAGGAGAAGCTCTCCGTCTTCGTGGAGTCCGAGGGCTTCTCCAAGGAGTACAAGCTCCCCAA
GGAGGCGCGCCTTCTCGTCAAGGACGGGGACTACGTGGAGGCGGGCCAGCCCCTCACCCGCGGGGCCATTGACCCCCACC
AGCTCTTGGAGGCCAAGGGCCCCGAGGCGGTGGAGCGCTACCTGGTGGAGGAGATCCAGAAGGTCTACCGGGCCCAGGGC
GTGAAGCTGCACGACAAGCACATTGAGATCGTGGTCCGGCAGATGATGAAGTACGTGGAGGTCACCGACCCCGGGGACAG
CCGCCTCCTCGAGGGCCAGGTCCTGGAGAAGTGGGACGTGGAGGCCCTGAACGAGAGGCTCATCGCCGAGGGCAAGACCC
CGGTGGCCTGGAAGCCCCTCCTCATGGGGGTCACGAAGAGCGCCCTCTCCACCAAGAGCTGGCTCTCCGCCGCCAGCTTC
CAGAACACCACCCACGTCCTCACCGAGGCGGCCATCGCCGGGAAGAAGGACGAGCTCATCGGCCTCAAGGAGAACGTCAT
CCTGGGCCGCCTGATCCCGGCGGGCACGGGTTCGGACTTCGTCCGCTTCACCCAGGTGGTGGACCAGAAGACCCTGAAGG
CCATTGAGGAGGCCCGCAAGGAGGCGGTGGAGGCCAAGGAGCGGCCCGCCGCCCGGCGCGGGGTCAAGCGGGAGCAGCCC
GGCAAGCAGGCTTAA

Upstream 100 bases:

>100_bases
TGGACGTGCAGACCCTGGACGAGAAGGACAACCCCGTGGACATCTTTGAGGGGTTGGCCTCCAAGCGGTGAGGGTGAAGG
CGGTTCCCCCGAGGTGAAGC

Downstream 100 bases:

>100_bases
GCCCGCCCCGCAAGGTGGAGGCCCCCGGTTTCCCCGGGGGCCTTTTTCCGGCATAATGGGCCCGTGCGCGCCCGGTTGTA
CGCCGCGTTCCGTCAGGTGG

Product: DNA-directed RNA polymerase beta' chain RpoC

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1524_residues
MKKEVRKVRIALASPEKIRSWSYGEVEKPETINYRTLKPERDGLFDERIFGPIKDYECACGKYKRQRFEGKVCERCGVEV
TKSIVRRYRMGHIELATPAAHIWFVKDVPSKIGTLLDLSATELEQVLYFSKYIVLDPKGAILNGVPVEKRQLLTDEEYRE
LRYGKQETYPLPPGVDALVKDGEEVVKGQELAPGVVSRLDGVALYRFPRRVRVEYVKKERAGLRLPLAAWVEKEAYKPGE
ILAELPEPYLFRAEEEGVVELKELEEGAFLVLRREDEPVATYFLPVGMTPLVVHGEIVEKGQPLAEAKGLLRMPRQVRAA
QVEAEEEGETVYLTLFLEWTEPKDYRVQPHMNVVVPEGARVEAGDKIVAAIDPEEEVIAEAEGVVHLHEPASILVVKARV
YPFEDDVEVSTGDRVAPGDVLADGGKVKSDVYGRVEVDLVRNVVRVVESYDIDARMGAEAIQQLLKELDLEALEKELLEE
MKHPSRARRAKARKRLEVVRAFLDSGNRPEWMILEAVPVLPPDLRPMVQVDGGRFATSDLNDLYRRLINRNNRLKKLLAQ
GAPEIIIRNEKRMLQEAVDALLDNGRRGAPVTNPGSDRPLRSLTDILSGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKLH
QCGLPKRMALELFKPFLLKKMEEKGIAPNVKAARRMLERQRDIKDEVWDALEEVIHGKVVLLNRAPTLHRLGIQAFQPVL
VEGQSIQLHPLVCEAFNADFDGDQMAVHVPLSSFAQAEARIQMLSAHNLLSPASGEPLAKPSRDIILGLYYITQVRKEKK
GAGLEFATPEEALAAHERGEVALNAPIKVAGRETSVGRLKYVFANPDEALLAVAHGIVDLQDVVTVRYMGKRLETSPGRI
LFARIVAEAVEDEKVAWELIQLDVPQEKNSLKDLVYQAFLRLGMEKTARLLDALKYYGFTFSTTSGITIGIDDAVIPEEK
KQYLEEADRKLLQIEQAYEMGFLTDRERYDQILQLWTETTEKVTQAVFKNFEENYPFNPLYVMAQSGARGNPQQIRQLCG
LRGLMQKPSGETFEVPVRSSFREGLTVLEYFISSHGARKGGADTALRTADSGYLTRKLVDVTHEIVVREADCGTTNYISV
PLFQPDEVTRSLRLRKRADIEAGLYGRVLAREVEVLGVRLEEGRYLSMDDVHLLIKAAEAGEIQEVPVRSPLTCQTRYGV
CQKCYGYDLSMARPVSIGEAVGIVAAQSIGEPGTQLTMRTFHTGGVAGAADITQGLPRVIELFEARRPKAKAVISEIDGV
VRIEETEEKLSVFVESEGFSKEYKLPKEARLLVKDGDYVEAGQPLTRGAIDPHQLLEAKGPEAVERYLVEEIQKVYRAQG
VKLHDKHIEIVVRQMMKYVEVTDPGDSRLLEGQVLEKWDVEALNERLIAEGKTPVAWKPLLMGVTKSALSTKSWLSAASF
QNTTHVLTEAAIAGKKDELIGLKENVILGRLIPAGTGSDFVRFTQVVDQKTLKAIEEARKEAVEAKERPAARRGVKREQP
GKQA

Sequences:
NA

Specific function: NA

COG id: COG0086

COG function: function code K; DNA-directed RNA polymerase, beta' subunit/160 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA