| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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Identifier: 55981781
GI number:
Start: 1689655
End: 1694229
Strand: Reverse
Name: Not Available
Synonym: TTHA1812
Alternate gene names: NA
Gene position: NA
Preceding gene: 55981782
Following gene: 55981780
Centisome position: NA
GC content: NA
Gene sequence:
>4575_bases ATGAAAAAAGAGGTTCGTAAGGTTCGCATCGCTTTGGCCTCCCCGGAGAAGATCCGCTCCTGGAGCTACGGGGAGGTGGA GAAGCCCGAGACCATCAACTACCGCACCCTCAAGCCCGAGCGGGACGGCCTCTTTGACGAGCGCATCTTCGGCCCCATCA AGGACTACGAGTGCGCCTGCGGCAAGTACAAGCGCCAGCGCTTTGAGGGCAAGGTGTGCGAGCGGTGTGGCGTGGAGGTG ACGAAGAGCATCGTCCGCCGCTACCGCATGGGGCACATTGAGCTCGCCACCCCCGCCGCCCACATCTGGTTCGTCAAGGA CGTCCCCTCCAAGATCGGGACCCTCCTGGACCTTTCCGCCACCGAGCTGGAGCAGGTCCTCTACTTCAGCAAGTACATCG TCTTGGATCCCAAGGGGGCCATCCTGAACGGGGTCCCGGTGGAGAAGCGCCAGCTCCTCACCGACGAGGAGTACCGGGAG CTCCGCTACGGCAAGCAGGAGACCTACCCCCTGCCCCCCGGGGTGGACGCGCTGGTGAAGGACGGGGAGGAGGTGGTAAA GGGCCAGGAGCTTGCCCCCGGGGTGGTGAGCCGCCTGGACGGCGTGGCCCTCTACCGCTTCCCCCGCCGCGTCCGGGTGG AGTACGTGAAGAAGGAGCGGGCCGGGCTCAGGCTTCCCCTCGCCGCCTGGGTGGAGAAGGAGGCCTACAAGCCCGGCGAA ATCCTCGCCGAGCTCCCCGAGCCCTACCTCTTCCGGGCCGAGGAGGAGGGCGTGGTGGAGCTTAAGGAGCTGGAGGAAGG GGCTTTCCTCGTCCTCCGCCGGGAGGACGAGCCGGTGGCCACCTACTTCCTCCCCGTGGGCATGACGCCCCTCGTGGTCC ACGGGGAGATCGTGGAGAAGGGCCAGCCCCTGGCCGAGGCCAAGGGCCTTCTCCGCATGCCCCGCCAGGTCCGGGCCGCC CAGGTGGAGGCGGAGGAGGAGGGGGAGACGGTCTACCTCACCCTCTTCCTGGAGTGGACGGAGCCCAAGGACTACCGCGT CCAGCCCCACATGAACGTGGTGGTCCCCGAGGGGGCCCGGGTGGAGGCGGGGGACAAGATCGTGGCCGCCATTGACCCCG AGGAGGAGGTCATCGCCGAGGCCGAGGGGGTGGTCCACCTCCACGAGCCCGCCAGCATCCTGGTGGTCAAGGCCCGGGTC TACCCCTTTGAGGACGACGTGGAGGTTTCCACCGGGGACCGGGTGGCCCCGGGGGACGTCCTCGCCGACGGGGGCAAGGT CAAAAGCGACGTCTACGGCCGGGTGGAGGTGGACCTGGTCCGCAACGTGGTCCGGGTGGTGGAGTCCTACGACATTGACG CCCGCATGGGGGCCGAGGCCATCCAGCAGCTCCTCAAGGAGCTGGACCTCGAGGCCCTGGAGAAGGAGCTTCTGGAGGAG ATGAAGCACCCCTCCCGGGCCCGGCGGGCCAAGGCCAGGAAGCGCCTGGAGGTGGTGCGGGCCTTCCTGGACTCGGGGAA CCGGCCCGAGTGGATGATCCTCGAGGCCGTCCCCGTCCTTCCCCCGGACCTCCGGCCCATGGTCCAGGTGGACGGCGGCC GCTTCGCCACGAGCGACCTCAACGACCTCTACCGCCGCCTCATCAACCGCAACAACCGGCTGAAGAAGCTCTTGGCCCAG GGGGCCCCCGAGATCATCATCCGCAACGAGAAGCGGATGCTCCAGGAGGCGGTGGACGCCCTCCTGGACAACGGCCGCCG CGGCGCTCCCGTGACCAACCCCGGCTCCGACCGGCCCCTCCGTAGCCTCACCGACATCCTCTCCGGCAAGCAGGGCCGCT TCCGCCAGAACCTCTTGGGCAAGCGGGTGGACTACTCGGGCCGGAGCGTGATCGTGGTGGGGCCCCAGCTCAAGCTCCAC CAGTGCGGCCTGCCCAAGCGGATGGCCCTGGAGCTCTTCAAGCCCTTCCTCCTCAAGAAGATGGAGGAGAAGGGCATCGC CCCCAACGTCAAGGCGGCGCGGCGCATGCTGGAGCGCCAGCGGGACATCAAGGACGAGGTGTGGGACGCCTTGGAGGAGG TGATCCACGGCAAGGTGGTCCTCTTGAACCGCGCCCCCACCCTGCACCGCTTGGGCATCCAGGCCTTCCAGCCCGTCTTG GTGGAGGGGCAGTCCATCCAGCTCCACCCCCTGGTCTGCGAGGCCTTCAACGCCGACTTTGACGGGGACCAGATGGCCGT CCACGTCCCCCTCTCCTCCTTCGCCCAGGCCGAGGCCCGCATCCAGATGCTCTCCGCCCACAACCTCCTCTCCCCGGCCT CCGGGGAGCCCCTGGCCAAGCCCAGCCGGGACATCATCCTGGGCCTCTACTACATCACCCAGGTGCGCAAGGAGAAGAAG GGGGCGGGCCTGGAGTTCGCCACCCCCGAGGAGGCCCTGGCCGCCCACGAGCGGGGAGAGGTGGCCCTGAACGCCCCCAT CAAGGTGGCGGGCAGGGAGACCAGCGTGGGCCGGCTCAAGTACGTCTTCGCCAACCCCGACGAGGCCCTCCTCGCCGTGG CCCACGGCATCGTGGACCTGCAGGACGTGGTCACCGTCCGCTACATGGGCAAGCGGCTGGAGACGAGCCCGGGCCGCATC CTCTTCGCCCGCATCGTGGCCGAGGCGGTGGAGGACGAGAAGGTGGCCTGGGAGCTCATCCAGCTGGACGTGCCCCAGGA GAAGAACTCCCTCAAGGACCTGGTCTACCAGGCCTTCCTCCGCCTGGGGATGGAGAAGACCGCCAGGCTCCTGGACGCCC TCAAGTACTACGGCTTCACCTTCTCCACCACGAGCGGCATCACCATCGGCATTGACGACGCCGTGATCCCGGAGGAGAAG AAGCAGTACCTGGAGGAGGCCGACCGCAAGCTCCTCCAGATTGAGCAGGCCTACGAGATGGGCTTCCTCACCGACCGGGA GCGGTACGACCAGATCCTCCAGCTCTGGACCGAGACCACGGAGAAGGTCACCCAGGCGGTCTTCAAGAACTTTGAGGAGA ACTACCCCTTCAACCCCCTCTACGTCATGGCCCAGTCCGGGGCCCGGGGCAACCCGCAGCAGATCCGCCAGCTCTGCGGC CTGCGCGGCCTCATGCAGAAGCCCTCGGGCGAGACCTTTGAGGTGCCGGTGCGCTCCTCCTTCCGCGAGGGCCTCACCGT CTTGGAGTACTTCATCTCCAGCCACGGGGCCCGTAAGGGCGGGGCGGACACCGCCCTCCGCACCGCCGACTCCGGCTACC TCACCCGCAAGCTCGTGGACGTGACCCACGAGATCGTGGTGCGGGAGGCGGACTGCGGCACCACCAACTACATCTCCGTT CCCCTCTTCCAGCCCGACGAGGTGACCCGCTCCTTGCGCCTGAGGAAGCGCGCGGACATTGAGGCGGGCCTCTACGGGCG CGTCCTGGCCCGGGAGGTGGAGGTCCTGGGGGTGCGCCTCGAGGAGGGCCGCTACCTCTCCATGGACGACGTCCACCTCC TCATCAAGGCCGCCGAGGCCGGGGAGATCCAGGAGGTGCCCGTCCGCAGCCCCCTCACCTGCCAGACCCGCTACGGGGTC TGCCAGAAGTGCTACGGGTACGACCTCTCCATGGCCCGGCCCGTCTCCATCGGCGAGGCGGTGGGCATCGTGGCCGCCCA GTCCATCGGCGAGCCCGGCACCCAGCTCACCATGCGCACCTTCCACACGGGCGGCGTGGCCGGGGCCGCGGACATCACCC AGGGTCTGCCCCGCGTCATTGAGCTCTTTGAGGCCCGGCGCCCCAAGGCCAAGGCGGTGATCTCCGAGATTGACGGGGTG GTGCGCATTGAGGAGACGGAGGAGAAGCTCTCCGTCTTCGTGGAGTCCGAGGGCTTCTCCAAGGAGTACAAGCTCCCCAA GGAGGCGCGCCTTCTCGTCAAGGACGGGGACTACGTGGAGGCGGGCCAGCCCCTCACCCGCGGGGCCATTGACCCCCACC AGCTCTTGGAGGCCAAGGGCCCCGAGGCGGTGGAGCGCTACCTGGTGGAGGAGATCCAGAAGGTCTACCGGGCCCAGGGC GTGAAGCTGCACGACAAGCACATTGAGATCGTGGTCCGGCAGATGATGAAGTACGTGGAGGTCACCGACCCCGGGGACAG CCGCCTCCTCGAGGGCCAGGTCCTGGAGAAGTGGGACGTGGAGGCCCTGAACGAGAGGCTCATCGCCGAGGGCAAGACCC CGGTGGCCTGGAAGCCCCTCCTCATGGGGGTCACGAAGAGCGCCCTCTCCACCAAGAGCTGGCTCTCCGCCGCCAGCTTC CAGAACACCACCCACGTCCTCACCGAGGCGGCCATCGCCGGGAAGAAGGACGAGCTCATCGGCCTCAAGGAGAACGTCAT CCTGGGCCGCCTGATCCCGGCGGGCACGGGTTCGGACTTCGTCCGCTTCACCCAGGTGGTGGACCAGAAGACCCTGAAGG CCATTGAGGAGGCCCGCAAGGAGGCGGTGGAGGCCAAGGAGCGGCCCGCCGCCCGGCGCGGGGTCAAGCGGGAGCAGCCC GGCAAGCAGGCTTAA
Upstream 100 bases:
>100_bases TGGACGTGCAGACCCTGGACGAGAAGGACAACCCCGTGGACATCTTTGAGGGGTTGGCCTCCAAGCGGTGAGGGTGAAGG CGGTTCCCCCGAGGTGAAGC
Downstream 100 bases:
>100_bases GCCCGCCCCGCAAGGTGGAGGCCCCCGGTTTCCCCGGGGGCCTTTTTCCGGCATAATGGGCCCGTGCGCGCCCGGTTGTA CGCCGCGTTCCGTCAGGTGG
Product: DNA-directed RNA polymerase beta' chain RpoC
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1524_residues MKKEVRKVRIALASPEKIRSWSYGEVEKPETINYRTLKPERDGLFDERIFGPIKDYECACGKYKRQRFEGKVCERCGVEV TKSIVRRYRMGHIELATPAAHIWFVKDVPSKIGTLLDLSATELEQVLYFSKYIVLDPKGAILNGVPVEKRQLLTDEEYRE LRYGKQETYPLPPGVDALVKDGEEVVKGQELAPGVVSRLDGVALYRFPRRVRVEYVKKERAGLRLPLAAWVEKEAYKPGE ILAELPEPYLFRAEEEGVVELKELEEGAFLVLRREDEPVATYFLPVGMTPLVVHGEIVEKGQPLAEAKGLLRMPRQVRAA QVEAEEEGETVYLTLFLEWTEPKDYRVQPHMNVVVPEGARVEAGDKIVAAIDPEEEVIAEAEGVVHLHEPASILVVKARV YPFEDDVEVSTGDRVAPGDVLADGGKVKSDVYGRVEVDLVRNVVRVVESYDIDARMGAEAIQQLLKELDLEALEKELLEE MKHPSRARRAKARKRLEVVRAFLDSGNRPEWMILEAVPVLPPDLRPMVQVDGGRFATSDLNDLYRRLINRNNRLKKLLAQ GAPEIIIRNEKRMLQEAVDALLDNGRRGAPVTNPGSDRPLRSLTDILSGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKLH QCGLPKRMALELFKPFLLKKMEEKGIAPNVKAARRMLERQRDIKDEVWDALEEVIHGKVVLLNRAPTLHRLGIQAFQPVL VEGQSIQLHPLVCEAFNADFDGDQMAVHVPLSSFAQAEARIQMLSAHNLLSPASGEPLAKPSRDIILGLYYITQVRKEKK GAGLEFATPEEALAAHERGEVALNAPIKVAGRETSVGRLKYVFANPDEALLAVAHGIVDLQDVVTVRYMGKRLETSPGRI LFARIVAEAVEDEKVAWELIQLDVPQEKNSLKDLVYQAFLRLGMEKTARLLDALKYYGFTFSTTSGITIGIDDAVIPEEK KQYLEEADRKLLQIEQAYEMGFLTDRERYDQILQLWTETTEKVTQAVFKNFEENYPFNPLYVMAQSGARGNPQQIRQLCG LRGLMQKPSGETFEVPVRSSFREGLTVLEYFISSHGARKGGADTALRTADSGYLTRKLVDVTHEIVVREADCGTTNYISV PLFQPDEVTRSLRLRKRADIEAGLYGRVLAREVEVLGVRLEEGRYLSMDDVHLLIKAAEAGEIQEVPVRSPLTCQTRYGV CQKCYGYDLSMARPVSIGEAVGIVAAQSIGEPGTQLTMRTFHTGGVAGAADITQGLPRVIELFEARRPKAKAVISEIDGV VRIEETEEKLSVFVESEGFSKEYKLPKEARLLVKDGDYVEAGQPLTRGAIDPHQLLEAKGPEAVERYLVEEIQKVYRAQG VKLHDKHIEIVVRQMMKYVEVTDPGDSRLLEGQVLEKWDVEALNERLIAEGKTPVAWKPLLMGVTKSALSTKSWLSAASF QNTTHVLTEAAIAGKKDELIGLKENVILGRLIPAGTGSDFVRFTQVVDQKTLKAIEEARKEAVEAKERPAARRGVKREQP GKQA
Sequences:
NA
Specific function: NA
COG id: COG0086
COG function: function code K; DNA-directed RNA polymerase, beta' subunit/160 kD subunit
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA