| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is fucA [C]
Identifier: 55981780
GI number: 55981780
Start: 1688989
End: 1689591
Strand: Reverse
Name: fucA [C]
Synonym: TTHA1811
Alternate gene names: 55981780
Gene position: 1689591-1688989 (Counterclockwise)
Preceding gene: 55981781
Following gene: 55981779
Centisome position: 91.34
GC content: 71.64
Gene sequence:
>603_bases GTGCGCGCCCGGTTGTACGCCGCGTTCCGTCAGGTGGGCGAGGACCTCTTCGCCCAGGGCCTCATCTCCGCCACGGCCGG GAACTTCTCCGTGCGCACCAAGGGGGGGTTCCTCATCACCAAAAGCGGGGTGCAGAAGGCGAGGCTCACCCCGGAGGACC TCCTGGAGGTGCCCTTGGAAGGGCCCATCCCCGAAGGGGCGAGCGTGGAGAGCGTGGTCCACCGGGAGGTCTACCGCAGG ACCGGGGCCCGGGCCCTGGTCCACGCCCACCCCCGGGTGGCCGTGGCCCTCTCCTTCCACCTCTCCCGCCTAAGGCCTTT GGACCTCGAGGGCCAGCACTACCTGAAGGAGGTCCCGGTCCTCGCCCCCAAGACGGTCTCCGCCACGGAGGAGGCGGCCT TGAGCGTGGCCGAGGCCTTGCGGGAGCACCGGGCCTGCCTCCTGAGGGGGCACGGGGCCTTCGCCGTGGGCCTGAAGGAG GCCCCGGAGGAGGCCCTTCTCGAGGCCTACGGCCTCATGACCACCCTGGAGGAGAGCGCCCAGATCCTCCTCTACCACCG CCTCTGGCAGGGGGCGGGGCCCGCCTTGGGGGGTGGGGAATGA
Upstream 100 bases:
>100_bases CGGGGTCAAGCGGGAGCAGCCCGGCAAGCAGGCTTAAGCCCGCCCCGCAAGGTGGAGGCCCCCGGTTTCCCCGGGGGCCT TTTTCCGGCATAATGGGCCC
Downstream 100 bases:
>100_bases GGGTCCTCTTCGTGGAGGGGAAGGACCGGGAGGCCCTGGTGGCCCTGGCGGAGGCCCTGCCCCATCCCTACTGGCTCCTC GAGGGCGAAGGGGTCTTCCT
Product: fuculose-1-phosphate aldolase
Products: Dihydroxyacetone phosphate; L-Lactaldehyde [C]
Alternate protein names: L-Fuculose Phosphate Aldolase; Fuculose-1-Phosphate Aldolase; Aldolase; L-Fuculose-Phosphate Aldolase; Class II Aldolase And Adducin N-Terminal Domain; Class II Aldolase/Adducin-Like; Aldolase Class II; Chain P L-Fuculose-1-Phosphate Aldolase; Aldolase Class II Protein; Class II Aldolase/Adducin-Like Protein; Class II Aldolase/Adducin N-Terminal
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MRARLYAAFRQVGEDLFAQGLISATAGNFSVRTKGGFLITKSGVQKARLTPEDLLEVPLEGPIPEGASVESVVHREVYRR TGARALVHAHPRVAVALSFHLSRLRPLDLEGQHYLKEVPVLAPKTVSATEEAALSVAEALREHRACLLRGHGAFAVGLKE APEEALLEAYGLMTTLEESAQILLYHRLWQGAGPALGGGE
Sequences:
>Translated_200_residues MRARLYAAFRQVGEDLFAQGLISATAGNFSVRTKGGFLITKSGVQKARLTPEDLLEVPLEGPIPEGASVESVVHREVYRR TGARALVHAHPRVAVALSFHLSRLRPLDLEGQHYLKEVPVLAPKTVSATEEAALSVAEALREHRACLLRGHGAFAVGLKE APEEALLEAYGLMTTLEESAQILLYHRLWQGAGPALGGGE >Mature_200_residues MRARLYAAFRQVGEDLFAQGLISATAGNFSVRTKGGFLITKSGVQKARLTPEDLLEVPLEGPIPEGASVESVVHREVYRR TGARALVHAHPRVAVALSFHLSRLRPLDLEGQHYLKEVPVLAPKTVSATEEAALSVAEALREHRACLLRGHGAFAVGLKE APEEALLEAYGLMTTLEESAQILLYHRLWQGAGPALGGGE
Specific function: Fucose metabolism; third step. [C]
COG id: COG0235
COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.1.2.17 [C]
Molecular weight: Translated: 21591; Mature: 21591
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRARLYAAFRQVGEDLFAQGLISATAGNFSVRTKGGFLITKSGVQKARLTPEDLLEVPLE CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCHHCCCHHHHHHCCCC GPIPEGASVESVVHREVYRRTGARALVHAHPRVAVALSFHLSRLRPLDLEGQHYLKEVPV CCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCEEEHHHHHHHHCCCCCCCCHHHHHHCCC LAPKTVSATEEAALSVAEALREHRACLLRGHGAFAVGLKEAPEEALLEAYGLMTTLEESA CCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCEEEECCHHCCHHHHHHHHHHHHHHHHHH QILLYHRLWQGAGPALGGGE HHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRARLYAAFRQVGEDLFAQGLISATAGNFSVRTKGGFLITKSGVQKARLTPEDLLEVPLE CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCHHCCCHHHHHHCCCC GPIPEGASVESVVHREVYRRTGARALVHAHPRVAVALSFHLSRLRPLDLEGQHYLKEVPV CCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCEEEHHHHHHHHCCCCCCCCHHHHHHCCC LAPKTVSATEEAALSVAEALREHRACLLRGHGAFAVGLKEAPEEALLEAYGLMTTLEESA CCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCEEEECCHHCCHHHHHHHHHHHHHHHHHH QILLYHRLWQGAGPALGGGE HHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Ca2+; Co2+; Mg2+; Mn2+; Zn2+ [C]
Kcat value (1/min): 19.3 [C]
Specific activity: 21.0
Km value (mM): 0.7 {L-fuculose} [C]
Substrates: L-Fuculose 1-phosphate [C]
Specific reaction: L-Fuculose 1-phosphate <==> Dihydroxyacetone phosphate + L-Lactaldehyde [C]
General reaction: Elimination of an aldehyde C-C bond; Cleavage [C]
Inhibitor: EDTA; Phosphoglycolohydroxamate [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA