| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
Click here to switch to the map view.
The map label for this gene is 55981748
Identifier: 55981748
GI number: 55981748
Start: 1665693
End: 1666172
Strand: Reverse
Name: 55981748
Synonym: TTHA1779
Alternate gene names: NA
Gene position: 1666172-1665693 (Counterclockwise)
Preceding gene: 55981749
Following gene: 55981747
Centisome position: 90.08
GC content: 71.67
Gene sequence:
>480_bases ATGGAGCACATCCGCCGGGTGGCGGAGCTCGCCCGGGAGATCGCCCGCAACAACGGGCTGGACCCCGAACGGGCTTACCT GGCGGGCCTGCTCCACGACGCCGCCCGCGACCTCCCGGAGGAGGAGCTGAGGCGCCTTGCCCCCCCGGAGAACGAGGTGG AGGAGGCCCACCCCCTCGCCCTCCACGGGCGGGCGGCCCGGGCCTTGGCCGCCTCCTGGGGGGTGCGGGACGAGGAGGTC CTCGAGGCCATCGAGGGCCACGTCTACGGCGTGGACCCCGAAAACGGGATCGGCATGGCCCTCTATGTGGCGGACGTCTC CGAGCCGGGCCGGGGGGTGAACGAGGAGATCCGGGAGCTCGCCCTGGCGGGCCGGCTTAAGGAGGCGTACCGCCTGGCGG TGCGGAACAAGGTCCACTACCTCAAGGCCAAGAAGATCCCCATCCACCCCAGGACCCTGGAGGTCTACCACAGCCTCTGA
Upstream 100 bases:
>100_bases CGCTACTGGGTTCCGCGCGCGGTGGAGGTGTACATTGAAAAGCACGGTCTCTATCGCTGATCTGGAGGCCAAGGTCCAAA GCCTCGTCCGTCCCGAGCGC
Downstream 100 bases:
>100_bases TGCGTCCCCGCCTCTCCTTCCTCCTCCTCGCCTTGGCCCTTTTCGCCCTTGGGGGGGTCCTCTCCTGGCCGAGGCCCGCC GCCCTTCCCACCTCCGCCCC
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MEHIRRVAELAREIARNNGLDPERAYLAGLLHDAARDLPEEELRRLAPPENEVEEAHPLALHGRAARALAASWGVRDEEV LEAIEGHVYGVDPENGIGMALYVADVSEPGRGVNEEIRELALAGRLKEAYRLAVRNKVHYLKAKKIPIHPRTLEVYHSL
Sequences:
>Translated_159_residues MEHIRRVAELAREIARNNGLDPERAYLAGLLHDAARDLPEEELRRLAPPENEVEEAHPLALHGRAARALAASWGVRDEEV LEAIEGHVYGVDPENGIGMALYVADVSEPGRGVNEEIRELALAGRLKEAYRLAVRNKVHYLKAKKIPIHPRTLEVYHSL >Mature_159_residues MEHIRRVAELAREIARNNGLDPERAYLAGLLHDAARDLPEEELRRLAPPENEVEEAHPLALHGRAARALAASWGVRDEEV LEAIEGHVYGVDPENGIGMALYVADVSEPGRGVNEEIRELALAGRLKEAYRLAVRNKVHYLKAKKIPIHPRTLEVYHSL
Specific function: Unknown
COG id: COG1713
COG function: function code H; Predicted HD superfamily hydrolase involved in NAD metabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005249 - InterPro: IPR004820 - InterPro: IPR003607 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2 [H]
EC number: NA
Molecular weight: Translated: 17798; Mature: 17798
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHIRRVAELAREIARNNGLDPERAYLAGLLHDAARDLPEEELRRLAPPENEVEEAHPLA CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHCCCCH LHGRAARALAASWGVRDEEVLEAIEGHVYGVDPENGIGMALYVADVSEPGRGVNEEIREL HCCHHHHHHHHHCCCCHHHHHHHHCCCEECCCCCCCCEEEEEEEECCCCCCCHHHHHHHH ALAGRLKEAYRLAVRNKVHYLKAKKIPIHPRTLEVYHSL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC >Mature Secondary Structure MEHIRRVAELAREIARNNGLDPERAYLAGLLHDAARDLPEEELRRLAPPENEVEEAHPLA CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHCCCCH LHGRAARALAASWGVRDEEVLEAIEGHVYGVDPENGIGMALYVADVSEPGRGVNEEIREL HCCHHHHHHHHHCCCCHHHHHHHHCCCEECCCCCCCCEEEEEEEECCCCCCCHHHHHHHH ALAGRLKEAYRLAVRNKVHYLKAKKIPIHPRTLEVYHSL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7569993; 8253680 [H]