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The map label for this gene is yebA [H]

Identifier: 55981739

GI number: 55981739

Start: 1658084

End: 1658983

Strand: Reverse

Name: yebA [H]

Synonym: TTHA1770

Alternate gene names: 55981739

Gene position: 1658983-1658084 (Counterclockwise)

Preceding gene: 55981740

Following gene: 55981738

Centisome position: 89.69

GC content: 72.44

Gene sequence:

>900_bases
ATGAAAAGGCGGCCTGTCCGGTACACCCTCCTCCTCGCCCGAAGCGGTGGGGGGAGCCGGGCCCTCACCTTTCCCGGCTG
GGCCGTGGGCCTCTTCCTGGCCTTCCTCGCCCTCTGGACGGGGGTGAACCTCTACCTCTGGCACCGGGCCCGGGAGGTGC
GGGCCCTCGAGGCCAGGCTCCACGCCCTCTCCCAAGAGGCGAGGCGGCTTTCCCTGGCCCTGGAGGCGGAGAAGGCCAAA
AACGGGGCCCTCTCCCAGGAGGCGGAGCGCACCAAGAAGGAGCTTGAGGCCCTCAAGGAGGCCATCAACGAGCTTCGCCG
CCGCGCCGGGCTTTCCCCCGTGAACGCCCTTCCCGTCCGCTACCAGGAGGGCGGGCAAGGGGGCGGGGCCATGGAGGGGT
GGAGGGCGGTGCGGGTGGAGGTTTTGGACCTGAAGAACCAGCTCGCCGAGCTCACCCCCGCCCTGGAGCGGACCCTGGAG
GTGGAGCAAAGCCTCCCCGCCGGCCTTCCCCTCCGGGGGCACGGGGAGGTCACCTCCTACTTCGGCCGCCGCAAAAACCC
CTTCGGCCCCGGCGTGGAGTTCCACGACGGCCTGGACTTTTCCGCCCCCTACGGGGCCCCCGTCTACGCCACGGGGAGCG
GGGTGGTGGTCCAGGCGGGGTGGATGGGGGTCTACGGCCTCGCCGTGGTGGTGGACCACGCCCGGGGCTACCGGACCCTC
TACGGCCACCTCTCCCGCCTGGCCGTCCGCCCGGGCCAGCGGGTGGCCCGGGGCGGGCTTCTGGGCTACGTGGGCTCCAC
GGGCCGGTCCACAGGGCCCCACCTCCACTACGGCGTCTACCGCTACGGGACGCCGGTGGACCCCAGGGCCTACCTGGACC
CCACCTGGTACACCCGGTAG

Upstream 100 bases:

>100_bases
GTGAACCCAGAAAGCGGGTCCCCGGGCCCAGACCGGGGCCGCCCCGCGCCGACCCCGGGCGCGGGCGCTTGGGCCCCCGG
GGGGTGGTATACTTCCGGGG

Downstream 100 bases:

>100_bases
AATGGGGCGGATGCTGGGAAGAAAGGAGCGCACCCTCACCTACCTCGGCCCCGACACCGAGGTCCTGGGCGACATGAGGG
CCAAGGGCCAGGTGCGCATT

Product: M23/M37 family endopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MKRRPVRYTLLLARSGGGSRALTFPGWAVGLFLAFLALWTGVNLYLWHRAREVRALEARLHALSQEARRLSLALEAEKAK
NGALSQEAERTKKELEALKEAINELRRRAGLSPVNALPVRYQEGGQGGGAMEGWRAVRVEVLDLKNQLAELTPALERTLE
VEQSLPAGLPLRGHGEVTSYFGRRKNPFGPGVEFHDGLDFSAPYGAPVYATGSGVVVQAGWMGVYGLAVVVDHARGYRTL
YGHLSRLAVRPGQRVARGGLLGYVGSTGRSTGPHLHYGVYRYGTPVDPRAYLDPTWYTR

Sequences:

>Translated_299_residues
MKRRPVRYTLLLARSGGGSRALTFPGWAVGLFLAFLALWTGVNLYLWHRAREVRALEARLHALSQEARRLSLALEAEKAK
NGALSQEAERTKKELEALKEAINELRRRAGLSPVNALPVRYQEGGQGGGAMEGWRAVRVEVLDLKNQLAELTPALERTLE
VEQSLPAGLPLRGHGEVTSYFGRRKNPFGPGVEFHDGLDFSAPYGAPVYATGSGVVVQAGWMGVYGLAVVVDHARGYRTL
YGHLSRLAVRPGQRVARGGLLGYVGSTGRSTGPHLHYGVYRYGTPVDPRAYLDPTWYTR
>Mature_299_residues
MKRRPVRYTLLLARSGGGSRALTFPGWAVGLFLAFLALWTGVNLYLWHRAREVRALEARLHALSQEARRLSLALEAEKAK
NGALSQEAERTKKELEALKEAINELRRRAGLSPVNALPVRYQEGGQGGGAMEGWRAVRVEVLDLKNQLAELTPALERTLE
VEQSLPAGLPLRGHGEVTSYFGRRKNPFGPGVEFHDGLDFSAPYGAPVYATGSGVVVQAGWMGVYGLAVVVDHARGYRTL
YGHLSRLAVRPGQRVARGGLLGYVGSTGRSTGPHLHYGVYRYGTPVDPRAYLDPTWYTR

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=121, Percent_Identity=43.801652892562, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI87082297, Length=96, Percent_Identity=36.4583333333333, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI87082174, Length=114, Percent_Identity=34.2105263157895, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 32843; Mature: 32843

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRPVRYTLLLARSGGGSRALTFPGWAVGLFLAFLALWTGVNLYLWHRAREVRALEARL
CCCCCEEEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHH
HALSQEARRLSLALEAEKAKNGALSQEAERTKKELEALKEAINELRRRAGLSPVNALPVR
HHHHHHHHHHHHHEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
YQEGGQGGGAMEGWRAVRVEVLDLKNQLAELTPALERTLEVEQSLPAGLPLRGHGEVTSY
ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
FGRRKNPFGPGVEFHDGLDFSAPYGAPVYATGSGVVVQAGWMGVYGLAVVVDHARGYRTL
HCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCHHHHHHHHHHHHCCCHHHH
YGHLSRLAVRPGQRVARGGLLGYVGSTGRSTGPHLHYGVYRYGTPVDPRAYLDPTWYTR
HHHHHHHHCCCCHHHHHCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRRPVRYTLLLARSGGGSRALTFPGWAVGLFLAFLALWTGVNLYLWHRAREVRALEARL
CCCCCEEEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHH
HALSQEARRLSLALEAEKAKNGALSQEAERTKKELEALKEAINELRRRAGLSPVNALPVR
HHHHHHHHHHHHHEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
YQEGGQGGGAMEGWRAVRVEVLDLKNQLAELTPALERTLEVEQSLPAGLPLRGHGEVTSY
ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
FGRRKNPFGPGVEFHDGLDFSAPYGAPVYATGSGVVVQAGWMGVYGLAVVVDHARGYRTL
HCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCHHHHHHHHHHHHCCCHHHH
YGHLSRLAVRPGQRVARGGLLGYVGSTGRSTGPHLHYGVYRYGTPVDPRAYLDPTWYTR
HHHHHHHHCCCCHHHHHCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]