| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is resE [H]
Identifier: 55981692
GI number: 55981692
Start: 1618192
End: 1619313
Strand: Direct
Name: resE [H]
Synonym: TTHA1723
Alternate gene names: 55981692
Gene position: 1618192-1619313 (Clockwise)
Preceding gene: 55981691
Following gene: 55981693
Centisome position: 87.48
GC content: 69.16
Gene sequence:
>1122_bases ATGCGCCTCTTCCTTAAACTCTTCCTGAGCCACCTCCTGGTGGCCCTCCTCGCCCTTTTGCTCCTCCTGCTGCTGGCGGA GGCCTTCGCCCCCGCCTTCTACCGGGGGCACGTGGAGCGCATGCTCCACGCCCTCTCCATGATGGGGGGCGGCATGATGG GCGAGGCCCTGAGGCGGGACCTGGAGGAGGGGCTTCGCTCCACCCTCACCGCCGCCCTTCTCGCCGCTTTACCCCTCGCC GCCCTGGGCGCCCTCCTCACCGCCTCCTTCGCCAGCCTGCGCCTCGCCAGGACCGCAAGGCTCCTCGCCGAGGGGAGCCG CCGGATGGCCGAGGGGGAGTACGGGGTCCGCCTTCCCCTTTTGGAGCGGGACGAGCTCGGGGAGCTCGCCCTCCACTTCA ACCGCCTGGCCGAGGCCCTGGAGAAGGTGGAGAAGACCCGGGCCGAGCTCATCGGCACCGTGGCCCACGAGCTCAGAACC CCCCTGGCCGCCCTCCAAGGGTACGCGGAGGGGCTTATAGACGGGGTCCTTTCCAAGGAGAAGGCCGCGGAGGGGATTCT GCGGGAGGTGAAGGCCATGCGCCGCCTGGTGGAGGACCTTTCCTTGGTCTCCCGGGTGGAGGCGAAGGCGGTGGAGATCC GTCCCAGGCCCCTGGACCCCAAGGGCCTCCTCGAGGAGGCCCTGGCCCGCTTCCAAAGCGCCTTCCAGGCCAAGGGGGTG GCGCTTTCCCTGGAGGCCCAAGACCCCCTTCCCCAGGTGTGGGCCGACGAGGAAAGGGTCCTCCAGGTGCTGGCCAACCT CCTCACCAACGCCCTCCGCCACACCCCGCAAGGCGGCGAGGTGCGCCTTAGGGCCTTCCGCCAGGGGGAGGCCGTGGCCT TCCAAGTGGCGGACACCGGCCCCGGCATCCCCGAGGAGCACCTGCCCCACATCTTTGAGCGCTTCTACCGGGTGGACAAG GCACGTAGCCGCAAGGAGGGAGGAAGCGGGGTGGGGCTCACCGTCGCCAAGGGCCTGGTGGAGGCCATGGGGGGGAGGAT CTTTGTGGAAAGCCGGGTGGGCGAGGGAACAACCTTCACCTTCACCCTCCCCCTTTACACGGGCTTAACGCTCAAGGGTT AG
Upstream 100 bases:
>100_bases GTCCACATCGCCGCCCTTCGGAAGAAGCTCGGGGACGATCCGGAAAACCCCCGCTTCATTGAAACGGTGCGGGGCGTGGG TTACCGCTTCAAGGACCCGG
Downstream 100 bases:
>100_bases GGTTTGGGGCATGAGAAGGATCCTGGCGTTCCTAGGCGTGGCGTTGGCCCTGGGGCTGGCCCAAACCCCCTCTCCAGAGG CCCTAAGGGGCGCCTCTCCC
Product: sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MRLFLKLFLSHLLVALLALLLLLLLAEAFAPAFYRGHVERMLHALSMMGGGMMGEALRRDLEEGLRSTLTAALLAALPLA ALGALLTASFASLRLARTARLLAEGSRRMAEGEYGVRLPLLERDELGELALHFNRLAEALEKVEKTRAELIGTVAHELRT PLAALQGYAEGLIDGVLSKEKAAEGILREVKAMRRLVEDLSLVSRVEAKAVEIRPRPLDPKGLLEEALARFQSAFQAKGV ALSLEAQDPLPQVWADEERVLQVLANLLTNALRHTPQGGEVRLRAFRQGEAVAFQVADTGPGIPEEHLPHIFERFYRVDK ARSRKEGGSGVGLTVAKGLVEAMGGRIFVESRVGEGTTFTFTLPLYTGLTLKG
Sequences:
>Translated_373_residues MRLFLKLFLSHLLVALLALLLLLLLAEAFAPAFYRGHVERMLHALSMMGGGMMGEALRRDLEEGLRSTLTAALLAALPLA ALGALLTASFASLRLARTARLLAEGSRRMAEGEYGVRLPLLERDELGELALHFNRLAEALEKVEKTRAELIGTVAHELRT PLAALQGYAEGLIDGVLSKEKAAEGILREVKAMRRLVEDLSLVSRVEAKAVEIRPRPLDPKGLLEEALARFQSAFQAKGV ALSLEAQDPLPQVWADEERVLQVLANLLTNALRHTPQGGEVRLRAFRQGEAVAFQVADTGPGIPEEHLPHIFERFYRVDK ARSRKEGGSGVGLTVAKGLVEAMGGRIFVESRVGEGTTFTFTLPLYTGLTLKG >Mature_373_residues MRLFLKLFLSHLLVALLALLLLLLLAEAFAPAFYRGHVERMLHALSMMGGGMMGEALRRDLEEGLRSTLTAALLAALPLA ALGALLTASFASLRLARTARLLAEGSRRMAEGEYGVRLPLLERDELGELALHFNRLAEALEKVEKTRAELIGTVAHELRT PLAALQGYAEGLIDGVLSKEKAAEGILREVKAMRRLVEDLSLVSRVEAKAVEIRPRPLDPKGLLEEALARFQSAFQAKGV ALSLEAQDPLPQVWADEERVLQVLANLLTNALRHTPQGGEVRLRAFRQGEAVAFQVADTGPGIPEEHLPHIFERFYRVDK ARSRKEGGSGVGLTVAKGLVEAMGGRIFVESRVGEGTTFTFTLPLYTGLTLKG
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=266, Percent_Identity=37.218045112782, Blast_Score=175, Evalue=3e-45, Organism=Escherichia coli, GI1786600, Length=233, Percent_Identity=36.480686695279, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI48994928, Length=236, Percent_Identity=36.0169491525424, Blast_Score=135, Evalue=5e-33, Organism=Escherichia coli, GI145693157, Length=239, Percent_Identity=30.1255230125523, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI1786783, Length=269, Percent_Identity=31.2267657992565, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1787894, Length=268, Percent_Identity=29.8507462686567, Blast_Score=114, Evalue=8e-27, Organism=Escherichia coli, GI87081816, Length=246, Percent_Identity=31.7073170731707, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1788713, Length=246, Percent_Identity=31.3008130081301, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1789149, Length=238, Percent_Identity=28.9915966386555, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1790436, Length=236, Percent_Identity=31.3559322033898, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1790346, Length=237, Percent_Identity=30.379746835443, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1786912, Length=238, Percent_Identity=28.9915966386555, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1788549, Length=227, Percent_Identity=29.5154185022026, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI87082128, Length=237, Percent_Identity=29.957805907173, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788279, Length=244, Percent_Identity=26.2295081967213, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1787374, Length=293, Percent_Identity=30.3754266211604, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1790861, Length=248, Percent_Identity=32.258064516129, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1790300, Length=242, Percent_Identity=30.9917355371901, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1789808, Length=219, Percent_Identity=26.4840182648402, Blast_Score=65, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6322044, Length=74, Percent_Identity=43.2432432432432, Blast_Score=70, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 40675; Mature: 40675
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLFLKLFLSHLLVALLALLLLLLLAEAFAPAFYRGHVERMLHALSMMGGGMMGEALRRD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LEEGLRSTLTAALLAALPLAALGALLTASFASLRLARTARLLAEGSRRMAEGEYGVRLPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC LERDELGELALHFNRLAEALEKVEKTRAELIGTVAHELRTPLAALQGYAEGLIDGVLSKE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAAEGILREVKAMRRLVEDLSLVSRVEAKAVEIRPRPLDPKGLLEEALARFQSAFQAKGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC ALSLEAQDPLPQVWADEERVLQVLANLLTNALRHTPQGGEVRLRAFRQGEAVAFQVADTG EEEEECCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEHHEECCCCEEEEEEECCC PGIPEEHLPHIFERFYRVDKARSRKEGGSGVGLTVAKGLVEAMGGRIFVESRVGEGTTFT CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCEEE FTLPLYTGLTLKG EEEHHHCCCCCCC >Mature Secondary Structure MRLFLKLFLSHLLVALLALLLLLLLAEAFAPAFYRGHVERMLHALSMMGGGMMGEALRRD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LEEGLRSTLTAALLAALPLAALGALLTASFASLRLARTARLLAEGSRRMAEGEYGVRLPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC LERDELGELALHFNRLAEALEKVEKTRAELIGTVAHELRTPLAALQGYAEGLIDGVLSKE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAAEGILREVKAMRRLVEDLSLVSRVEAKAVEIRPRPLDPKGLLEEALARFQSAFQAKGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC ALSLEAQDPLPQVWADEERVLQVLANLLTNALRHTPQGGEVRLRAFRQGEAVAFQVADTG EEEEECCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEHHEECCCCEEEEEEECCC PGIPEEHLPHIFERFYRVDKARSRKEGGSGVGLTVAKGLVEAMGGRIFVESRVGEGTTFT CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCEEE FTLPLYTGLTLKG EEEHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]