| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is trmB [H]
Identifier: 55981588
GI number: 55981588
Start: 1534617
End: 1535552
Strand: Direct
Name: trmB [H]
Synonym: TTHA1619
Alternate gene names: 55981588
Gene position: 1534617-1535552 (Clockwise)
Preceding gene: 55981585
Following gene: 55981589
Centisome position: 82.96
GC content: 71.58
Gene sequence:
>936_bases GTGCTGGTCGTGCCCGCCCGCCTCCACCGCTGGCCTCCCGAAGTGCAGGACCTCTTCGGCCGGGAAGGCCCCCTGGTCCT GGAGATCGGCTTCGGCGACGGCCGCTTCACGGCGGAGCTCGCCCGGTCGCGCCCCGACTGGCTCGTCCTCGGGGCCGAGG TCTCGGCGGCCAGCGTCCTCCGGGCCCTTCGCCGCATGCGCCGCGAGGGCCTCGCCAACGTCCGCCTCTACCACGGCCAG GGCCCCTTCGCCCTTCGGAACCTGGTCTTGCCGGGGACCCTGGACCAGGTCATTGTCAACTTCCCCGACCCCTGGCCCAA GAAGCGGCACCAGGAGCGGCGCCTCCTGCGGGAGGCCTTCTTCCGCAGGCTCTCCACCCGCCTGAAGCCCGGGGGGAGCC TCCTCCTCACCACGGACCACGAGGAGTACTTCCGCTTCGCCCTGGAGGAGGCGGAGCGGACCGGGCTCTACCGGGTGGAG GTCCGGCCGCCCCCCGAGGCCCACCTCCGCACCAAGTACGCCCTAAAGTGGAAGGAGGCGGGGCGGGCCTTCTTCCACGC CGCCTTCATTAAGCTTCGCGAAGACCCCGCCCCCTGGCCCCCCTTAAGGAGGTACGACGTGGCCCACGCCCTGCTTTCCG GCGAGCTGCCCCAAGACCTGGCCCTGGAGAAGACCCCCGTGCGCCTGAAGGAAGGGGTCGCCGTCTTCCTGGAGGTGGCC CGGGGCAAGGAGGGGTTTTACGTCCTCACCCACGTGGAGGAGGAGGACCTGACCCAGGACCTGCTCCTCGAGGTCCGCAA AAGCGCCCGGGGGGTCTACGCCGGGGTGAGCCGCTTCGGCAGCCCCCTCATCACCGAGGCCGTCAAGGGGGCGGTGCGGG CCCTGGTGGACCGGCTCGAGGCCCACGGGCTGGAGGTGGTCCAGGACCACACCTGA
Upstream 100 bases:
>100_bases TTGACCTTGCACCCCAGGGTACGGAAGGCGGCGCGCATCCTTCTGATTTTGCGCCGGGGGGAAGGCCCCGTCAAGGACGG AGGCCGTATAATCGGCAACC
Downstream 100 bases:
>100_bases GGCCGGGTAAGATAAGCCCATGGACCTGCCTCCCCGCACCGGCTCCCTCAAGTGGGGCACCTACCCCGAGGACGTCCTCC CCCTCTGGGTGGCGGACATG
Product: methyltransferase
Products: NA
Alternate protein names: tRNA(m7G46)-methyltransferase [H]
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MLVVPARLHRWPPEVQDLFGREGPLVLEIGFGDGRFTAELARSRPDWLVLGAEVSAASVLRALRRMRREGLANVRLYHGQ GPFALRNLVLPGTLDQVIVNFPDPWPKKRHQERRLLREAFFRRLSTRLKPGGSLLLTTDHEEYFRFALEEAERTGLYRVE VRPPPEAHLRTKYALKWKEAGRAFFHAAFIKLREDPAPWPPLRRYDVAHALLSGELPQDLALEKTPVRLKEGVAVFLEVA RGKEGFYVLTHVEEEDLTQDLLLEVRKSARGVYAGVSRFGSPLITEAVKGAVRALVDRLEAHGLEVVQDHT
Sequences:
>Translated_311_residues MLVVPARLHRWPPEVQDLFGREGPLVLEIGFGDGRFTAELARSRPDWLVLGAEVSAASVLRALRRMRREGLANVRLYHGQ GPFALRNLVLPGTLDQVIVNFPDPWPKKRHQERRLLREAFFRRLSTRLKPGGSLLLTTDHEEYFRFALEEAERTGLYRVE VRPPPEAHLRTKYALKWKEAGRAFFHAAFIKLREDPAPWPPLRRYDVAHALLSGELPQDLALEKTPVRLKEGVAVFLEVA RGKEGFYVLTHVEEEDLTQDLLLEVRKSARGVYAGVSRFGSPLITEAVKGAVRALVDRLEAHGLEVVQDHT >Mature_311_residues MLVVPARLHRWPPEVQDLFGREGPLVLEIGFGDGRFTAELARSRPDWLVLGAEVSAASVLRALRRMRREGLANVRLYHGQ GPFALRNLVLPGTLDQVIVNFPDPWPKKRHQERRLLREAFFRRLSTRLKPGGSLLLTTDHEEYFRFALEEAERTGLYRVE VRPPPEAHLRTKYALKWKEAGRAFFHAAFIKLREDPAPWPPLRRYDVAHALLSGELPQDLALEKTPVRLKEGVAVFLEVA RGKEGFYVLTHVEEEDLTQDLLLEVRKSARGVYAGVSRFGSPLITEAVKGAVRALVDRLEAHGLEVVQDHT
Specific function: Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA [H]
COG id: COG0220
COG function: function code R; Predicted S-adenosylmethionine-dependent methyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. TrmB family [H]
Homologues:
Organism=Escherichia coli, GI1789330, Length=181, Percent_Identity=31.4917127071823, Blast_Score=92, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003358 [H]
Pfam domain/function: PF02390 Methyltransf_4 [H]
EC number: =2.1.1.33 [H]
Molecular weight: Translated: 35375; Mature: 35375
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVVPARLHRWPPEVQDLFGREGPLVLEIGFGDGRFTAELARSRPDWLVLGAEVSAASVL CEEECHHHHCCCCHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCEEEEECCCCHHHHH RALRRMRREGLANVRLYHGQGPFALRNLVLPGTLDQVIVNFPDPWPKKRHQERRLLREAF HHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCCHHHHEECCCCCCCHHHHHHHHHHHHHH FRRLSTRLKPGGSLLLTTDHEEYFRFALEEAERTGLYRVEVRPPPEAHLRTKYALKWKEA HHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHEEEHHHH GRAFFHAAFIKLREDPAPWPPLRRYDVAHALLSGELPQDLALEKTPVRLKEGVAVFLEVA HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHH RGKEGFYVLTHVEEEDLTQDLLLEVRKSARGVYAGVSRFGSPLITEAVKGAVRALVDRLE CCCCCEEEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AHGLEVVQDHT HCCCHHHCCCC >Mature Secondary Structure MLVVPARLHRWPPEVQDLFGREGPLVLEIGFGDGRFTAELARSRPDWLVLGAEVSAASVL CEEECHHHHCCCCHHHHHCCCCCCEEEEEECCCCCHHHHHHHCCCCEEEEECCCCHHHHH RALRRMRREGLANVRLYHGQGPFALRNLVLPGTLDQVIVNFPDPWPKKRHQERRLLREAF HHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCCHHHHEECCCCCCCHHHHHHHHHHHHHH FRRLSTRLKPGGSLLLTTDHEEYFRFALEEAERTGLYRVEVRPPPEAHLRTKYALKWKEA HHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHEEEHHHH GRAFFHAAFIKLREDPAPWPPLRRYDVAHALLSGELPQDLALEKTPVRLKEGVAVFLEVA HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHH RGKEGFYVLTHVEEEDLTQDLLLEVRKSARGVYAGVSRFGSPLITEAVKGAVRALVDRLE CCCCCEEEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AHGLEVVQDHT HCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA