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The map label for this gene is ychE [C]

Identifier: 55981527

GI number: 55981527

Start: 1482902

End: 1483513

Strand: Reverse

Name: ychE [C]

Synonym: TTHA1558

Alternate gene names: 55981527

Gene position: 1483513-1482902 (Counterclockwise)

Preceding gene: 55981528

Following gene: 55981520

Centisome position: 80.2

GC content: 70.59

Gene sequence:

>612_bases
GTGCTGGAGCTCTTTCTCAAGTCCTTCCTGACCCTCTTCGTGGTCATGGACCCGGTGGGGCTCGTCCCCGTCTTCGTGGC
CTTGGCGGGGGACCGCCCCCACCGGACCCAGGTCCTCATCGCCCGCAAGGCGGTCCTGGTGGCGGGGGGGCTGCTCACCT
TCTTCTACTTTTTCGGGCGGGAGCTTCTGGGGCACCTGGGGATCTCCCTCGAGGCCCTGCGCATCGCGGGCGGGGTGCTC
CTCTTCCGCATCGCCACGGAGATGGTCTTCGCCCACCACGAGCGGGAGACGGAGGAGGAGCGGGACGAGGCCTTGAGCCG
GGCGGACATCTCCGTCTTTCCCCTCGCCATCCCCCTCATCGCCGGGCCTGGGGCCTTGGCCAGCGTCCTGGTCCTGGGGG
CGGAGGCCAAGGGGGTGCCCTACGGCTTCGCCGTGGTCCTTTTCACCGCCTACCTCGTCCTCTTCCTGGCCTACCTCTTC
CTCCGGGGGGCCACGGCGGTGCGCCGGGCCCTGGGGCGGACGGGGGTGAACGTGGTCACCCGCGTCCTGGGCCTCCTCCT
CGCCGCCCTGGCCGTGCAGTACGTGGCGGACGGGGTGAAGGGCCTCCTCTAG

Upstream 100 bases:

>100_bases
GTGGCCCGAACCGAGGAGGCGGCCCAGGCCCTCGAGGACGAGTTCGCGGGCCTGCTCGTGGAGGGAAGGGCCCTGCGGCG
GGCGCTTTCCGGTTCCTAGG

Downstream 100 bases:

>100_bases
ACCTGGAAGACCCCGATGCGGAAAGGCTCCCGCTCCGGGTTCAGGGCGCAGGCCTCGAGGGCCTTGATGAGCCACTTCCG
GGTCTCGTGGGGGAAGATCA

Product: MarC family integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MLELFLKSFLTLFVVMDPVGLVPVFVALAGDRPHRTQVLIARKAVLVAGGLLTFFYFFGRELLGHLGISLEALRIAGGVL
LFRIATEMVFAHHERETEEERDEALSRADISVFPLAIPLIAGPGALASVLVLGAEAKGVPYGFAVVLFTAYLVLFLAYLF
LRGATAVRRALGRTGVNVVTRVLGLLLAALAVQYVADGVKGLL

Sequences:

>Translated_203_residues
MLELFLKSFLTLFVVMDPVGLVPVFVALAGDRPHRTQVLIARKAVLVAGGLLTFFYFFGRELLGHLGISLEALRIAGGVL
LFRIATEMVFAHHERETEEERDEALSRADISVFPLAIPLIAGPGALASVLVLGAEAKGVPYGFAVVLFTAYLVLFLAYLF
LRGATAVRRALGRTGVNVVTRVLGLLLAALAVQYVADGVKGLL
>Mature_203_residues
MLELFLKSFLTLFVVMDPVGLVPVFVALAGDRPHRTQVLIARKAVLVAGGLLTFFYFFGRELLGHLGISLEALRIAGGVL
LFRIATEMVFAHHERETEEERDEALSRADISVFPLAIPLIAGPGALASVLVLGAEAKGVPYGFAVVLFTAYLVLFLAYLF
LRGATAVRRALGRTGVNVVTRVLGLLLAALAVQYVADGVKGLL

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=201, Percent_Identity=35.3233830845771, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1789842, Length=196, Percent_Identity=31.1224489795918, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1787809, Length=194, Percent_Identity=27.319587628866, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 21804; Mature: 21804

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELFLKSFLTLFVVMDPVGLVPVFVALAGDRPHRTQVLIARKAVLVAGGLLTFFYFFGR
CHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLGHLGISLEALRIAGGVLLFRIATEMVFAHHERETEEERDEALSRADISVFPLAIPLI
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHH
AGPGALASVLVLGAEAKGVPYGFAVVLFTAYLVLFLAYLFLRGATAVRRALGRTGVNVVT
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHH
RVLGLLLAALAVQYVADGVKGLL
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLELFLKSFLTLFVVMDPVGLVPVFVALAGDRPHRTQVLIARKAVLVAGGLLTFFYFFGR
CHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLGHLGISLEALRIAGGVLLFRIATEMVFAHHERETEEERDEALSRADISVFPLAIPLI
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHH
AGPGALASVLVLGAEAKGVPYGFAVVLFTAYLVLFLAYLFLRGATAVRRALGRTGVNVVT
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHH
RVLGLLLAALAVQYVADGVKGLL
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]