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The map label for this gene is recN [H]

Identifier: 55981494

GI number: 55981494

Start: 1450514

End: 1452100

Strand: Direct

Name: recN [H]

Synonym: TTHA1525

Alternate gene names: 55981494

Gene position: 1450514-1452100 (Clockwise)

Preceding gene: 55981493

Following gene: 55981495

Centisome position: 78.42

GC content: 74.8

Gene sequence:

>1587_bases
ATGGGGGGGATGCTCCGCCGCCTCGAGGTCCAGAACCTCGCCGTCATCCGCGAGGCCGCCTTGGACTTCGCCCCCGGCCT
CAACGTCCTCACCGGGGAGACGGGCGCGGGGAAAAGCCTCCTCGTGGACGCCCTCGCCCTCCTCCTCGGGGGGCGGGCGG
AGGGGCTTATCGGGCCCTACGGGGAAAGCCTCCTCGTGACCGCCTTCTTTGAGGGCCCCCCCGGGGAGGCGGTCCTCTCC
CGCCGCGTGGGGGCCCGCTCCACCCCCAGGGTGGACGGGGAGGTGGTCACCCTGAAGGAGCTCCAGGCGGAAGCGGAAAG
GCGCCTCTCCCTCCACGCCCAGCACACCGCCTTGGCCCTCCTCTCCCCCAGGCGCCAGCGGGAGGCCCTGGACGCCCTCC
TCCCCGAGGGCCTCCTCGCCGCCTACCAGGAGGCCTACGCCCGGCGCGAGGCCCTCCTGAAGGAGAAGGCGGCCCTGGAG
GAAAGCCTAAAGGCCCGGGCGGAGCGGGAGGACCTCCTCCGCTACCAGATCCGGGAGATTGAGGAGGCCCGGGTGCGGCC
CGGGGAGGAGGAGGAGCTTTTGGCCCTGGCGGAGCGCCTCCGCCACCTGGAGACCATCCGGGAAAGGCTCGCCCGGGCCC
TCGCCCTCCTCACGGAGCGGGAAGCCCAGGACCTCCTGGCCCTGGCGGCGAAGGAGGTGCGGGCGGCGGCCCGGCACGAC
CCGGCCCTCGAGGCCCTGGCCGAGGAGCTTTCGGGGGCGGCCGAGGCGGTCCGGGCCGTGGCCCGGGAGCTGGAGGACCA
CCTGGAGGGCCTGGACCTGGACCCCGAGGAGCTGGACCGGGTGGAGGCCCGCCTCAGCCTCCTGGAGCGCCTGAAGCGGA
AGTACGGCCCCACCTTAGCGGACGTCCTGGCCCACGCCCAAAAGGCCCGGGAGGAGCTCGCCCGGATGGAAGGGGGGGAG
GAGCGGCTTTCGGAGGTGGAGCGCCTCCTCAAGGCCCTCCACGAGGAGGTAGAGGCCCGGGGGCAGGCCCTGAGGCGGGC
CCGGGAGGAGGCGGCGCGAAGGCTTACGGAGGGGATGGTGCGGGAGCTTCCCGCCCTGGGCCTCGCCGGGGCCCGCTTCG
CGGTGGTCCTGGAGCCCCTCCCCGAGCCCGGCCCCCAGGGCCTCGAGGCGGTGGCCTTCCGGGTGGCCCCAAACCCCAAC
CTGCCCCCGGCCCCCCTCGAGGCCCTAAGCGGCGGGGAGCTCTCCCGCGTGGCCCTGGCCCTCGCCCTCCTCACGGGGAC
CGAGGCGCCCACCGTGGTCTTTGACGAGGTGGACGCCGGGGTGGGCGGGGAAACCGCCTGGCGGCTCGCCGAAAGGCTCA
AGCGCCTGGCCGAGAGGCGGCAGGTCCTGGTGGTGACCCACCTGCCCCAGGTGGCCGCCGTGGCCCAGCGCCACTTCCGG
GTGACCAAGACCCCCGAGGGCGTGCGGGTGGAGCCCTTGGCGGGCGAGGCCCGGGTGAAGGAGATCGCCCGCCTCCTCTC
CGGGGCCTACACCCAGGCGGCTTTGGCCCACGCCCGGGAGCTTCTGGAGGCCCAGGGCGCCCTTTAG

Upstream 100 bases:

>100_bases
GGCCCTTCTGGAGGGCCCCTCGGAGGCCCTGCGGGAAGAGGTGCGCAGGCTCGCCCTGGCCCACCCCATGCCCTGAAGGC
CCCCGCGGCACCCCCTTAAA

Downstream 100 bases:

>100_bases
GAGGTGGAAGCGTGAAGGCGAGCGTGCGGTGGGTGGAGTGCCCCAGGGACGCTTGGCAGGGCTTCTCCCGCTTCATCCCC
ACGGAGGAGAAGGTGGCCTT

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 528; Mature: 527

Protein sequence:

>528_residues
MGGMLRRLEVQNLAVIREAALDFAPGLNVLTGETGAGKSLLVDALALLLGGRAEGLIGPYGESLLVTAFFEGPPGEAVLS
RRVGARSTPRVDGEVVTLKELQAEAERRLSLHAQHTALALLSPRRQREALDALLPEGLLAAYQEAYARREALLKEKAALE
ESLKARAEREDLLRYQIREIEEARVRPGEEEELLALAERLRHLETIRERLARALALLTEREAQDLLALAAKEVRAAARHD
PALEALAEELSGAAEAVRAVARELEDHLEGLDLDPEELDRVEARLSLLERLKRKYGPTLADVLAHAQKAREELARMEGGE
ERLSEVERLLKALHEEVEARGQALRRAREEAARRLTEGMVRELPALGLAGARFAVVLEPLPEPGPQGLEAVAFRVAPNPN
LPPAPLEALSGGELSRVALALALLTGTEAPTVVFDEVDAGVGGETAWRLAERLKRLAERRQVLVVTHLPQVAAVAQRHFR
VTKTPEGVRVEPLAGEARVKEIARLLSGAYTQAALAHARELLEAQGAL

Sequences:

>Translated_528_residues
MGGMLRRLEVQNLAVIREAALDFAPGLNVLTGETGAGKSLLVDALALLLGGRAEGLIGPYGESLLVTAFFEGPPGEAVLS
RRVGARSTPRVDGEVVTLKELQAEAERRLSLHAQHTALALLSPRRQREALDALLPEGLLAAYQEAYARREALLKEKAALE
ESLKARAEREDLLRYQIREIEEARVRPGEEEELLALAERLRHLETIRERLARALALLTEREAQDLLALAAKEVRAAARHD
PALEALAEELSGAAEAVRAVARELEDHLEGLDLDPEELDRVEARLSLLERLKRKYGPTLADVLAHAQKAREELARMEGGE
ERLSEVERLLKALHEEVEARGQALRRAREEAARRLTEGMVRELPALGLAGARFAVVLEPLPEPGPQGLEAVAFRVAPNPN
LPPAPLEALSGGELSRVALALALLTGTEAPTVVFDEVDAGVGGETAWRLAERLKRLAERRQVLVVTHLPQVAAVAQRHFR
VTKTPEGVRVEPLAGEARVKEIARLLSGAYTQAALAHARELLEAQGAL
>Mature_527_residues
GGMLRRLEVQNLAVIREAALDFAPGLNVLTGETGAGKSLLVDALALLLGGRAEGLIGPYGESLLVTAFFEGPPGEAVLSR
RVGARSTPRVDGEVVTLKELQAEAERRLSLHAQHTALALLSPRRQREALDALLPEGLLAAYQEAYARREALLKEKAALEE
SLKARAEREDLLRYQIREIEEARVRPGEEEELLALAERLRHLETIRERLARALALLTEREAQDLLALAAKEVRAAARHDP
ALEALAEELSGAAEAVRAVARELEDHLEGLDLDPEELDRVEARLSLLERLKRKYGPTLADVLAHAQKAREELARMEGGEE
RLSEVERLLKALHEEVEARGQALRRAREEAARRLTEGMVRELPALGLAGARFAVVLEPLPEPGPQGLEAVAFRVAPNPNL
PPAPLEALSGGELSRVALALALLTGTEAPTVVFDEVDAGVGGETAWRLAERLKRLAERRQVLVVTHLPQVAAVAQRHFRV
TKTPEGVRVEPLAGEARVKEIARLLSGAYTQAALAHARELLEAQGAL

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=555, Percent_Identity=32.0720720720721, Blast_Score=229, Evalue=3e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 57508; Mature: 57377

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGMLRRLEVQNLAVIREAALDFAPGLNVLTGETGAGKSLLVDALALLLGGRAEGLIGPY
CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCC
GESLLVTAFFEGPPGEAVLSRRVGARSTPRVDGEVVTLKELQAEAERRLSLHAQHTALAL
CCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH
LSPRRQREALDALLPEGLLAAYQEAYARREALLKEKAALEESLKARAEREDLLRYQIREI
HCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEARVRPGEEEELLALAERLRHLETIRERLARALALLTEREAQDLLALAAKEVRAAARHD
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PALEALAEELSGAAEAVRAVARELEDHLEGLDLDPEELDRVEARLSLLERLKRKYGPTLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH
DVLAHAQKAREELARMEGGEERLSEVERLLKALHEEVEARGQALRRAREEAARRLTEGMV
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RELPALGLAGARFAVVLEPLPEPGPQGLEAVAFRVAPNPNLPPAPLEALSGGELSRVALA
HHCCCCCCCCCCCEEEECCCCCCCCCCHHHEEEEECCCCCCCCCHHHHCCCCHHHHHHHH
LALLTGTEAPTVVFDEVDAGVGGETAWRLAERLKRLAERRQVLVVTHLPQVAAVAQRHFR
HHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHCC
VTKTPEGVRVEPLAGEARVKEIARLLSGAYTQAALAHARELLEAQGAL
CCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GGMLRRLEVQNLAVIREAALDFAPGLNVLTGETGAGKSLLVDALALLLGGRAEGLIGPY
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCC
GESLLVTAFFEGPPGEAVLSRRVGARSTPRVDGEVVTLKELQAEAERRLSLHAQHTALAL
CCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH
LSPRRQREALDALLPEGLLAAYQEAYARREALLKEKAALEESLKARAEREDLLRYQIREI
HCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEARVRPGEEEELLALAERLRHLETIRERLARALALLTEREAQDLLALAAKEVRAAARHD
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PALEALAEELSGAAEAVRAVARELEDHLEGLDLDPEELDRVEARLSLLERLKRKYGPTLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH
DVLAHAQKAREELARMEGGEERLSEVERLLKALHEEVEARGQALRRAREEAARRLTEGMV
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RELPALGLAGARFAVVLEPLPEPGPQGLEAVAFRVAPNPNLPPAPLEALSGGELSRVALA
HHCCCCCCCCCCCEEEECCCCCCCCCCHHHEEEEECCCCCCCCCHHHHCCCCHHHHHHHH
LALLTGTEAPTVVFDEVDAGVGGETAWRLAERLKRLAERRQVLVVTHLPQVAAVAQRHFR
HHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHCC
VTKTPEGVRVEPLAGEARVKEIARLLSGAYTQAALAHARELLEAQGAL
CCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]