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The map label for this gene is yqfA [H]

Identifier: 55981470

GI number: 55981470

Start: 1430268

End: 1430885

Strand: Direct

Name: yqfA [H]

Synonym: TTHA1501

Alternate gene names: 55981470

Gene position: 1430268-1430885 (Clockwise)

Preceding gene: 55981469

Following gene: 55981471

Centisome position: 77.32

GC content: 69.09

Gene sequence:

>618_bases
ATGGTCCGCGAGCCCTTCAACGCCCTGAGCCACGCCCTCGGGGTGCCCCTCGCCCTCCTCGGAGGCCTCCTTCTCCTCCT
CCTGGCCCCCAGGGAGGCCTGGCCCGCCCTTCTCGCCTTCGGCCTCACCATGGCCCTGATGTTCGGGGCGAGCGCCCTCT
ACCACACCCTCAAGGCGGAAGACCGCCTCCTGGCCTGGCTCAGGAGGCTGGACCACGCCGCCATCTTCCTCTTCATCGCG
GGGAGCTACACCCCCTTCCTGGCCGAGGGGCTGGAGGGGGGCGATAAGGCCCTGGCCCTCGCCCTCGTGTGGGGGCTCGC
CCTCCTCGGGGTGGGCTTCCGCCTCCTCTACCTCAAGGCCCCAAGGTGGCTCTACACCCTGGCCTACCTGGCCCTGGGGT
GGCTTTCCCTCTTCTTCTTGCCGAGGCTTCACCTTCCCCTTCCCACCCTCGCCCTCATGGCCCTCTCCGGCCTCTCCTAC
ACCTTGGGGGCCTGGGTCTACGGAACCAAGCGCCCCGACCCCTGGCCCGGGCGGGTGGGCTTCCACGGGGTGTGGCACGT
CCTCGTCCTCCTGGGAAGCCTCTTTATGTACCTGGCGGTCTTGAGCCTCTACACCTAG

Upstream 100 bases:

>100_bases
GGGGCATAGACTCCCTAAGCCTCAACCCCGATGCCCTCCTGCGCACGGTGCGGGAGGTGGCCGAGGTGGAAAGGAGGCTC
GGGATCGGGTAGCCTGGGGC

Downstream 100 bases:

>100_bases
CTTTCTCATGAGAAAGTAAGTACCATGGGAGGCATGGAGCCGCCCCTGATCCTCATCGTGGAGGACGAGAAGGACATCGC
CCGCTTCATTGAGCTTGAGC

Product: hemolysin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MVREPFNALSHALGVPLALLGGLLLLLLAPREAWPALLAFGLTMALMFGASALYHTLKAEDRLLAWLRRLDHAAIFLFIA
GSYTPFLAEGLEGGDKALALALVWGLALLGVGFRLLYLKAPRWLYTLAYLALGWLSLFFLPRLHLPLPTLALMALSGLSY
TLGAWVYGTKRPDPWPGRVGFHGVWHVLVLLGSLFMYLAVLSLYT

Sequences:

>Translated_205_residues
MVREPFNALSHALGVPLALLGGLLLLLLAPREAWPALLAFGLTMALMFGASALYHTLKAEDRLLAWLRRLDHAAIFLFIA
GSYTPFLAEGLEGGDKALALALVWGLALLGVGFRLLYLKAPRWLYTLAYLALGWLSLFFLPRLHLPLPTLALMALSGLSY
TLGAWVYGTKRPDPWPGRVGFHGVWHVLVLLGSLFMYLAVLSLYT
>Mature_205_residues
MVREPFNALSHALGVPLALLGGLLLLLLAPREAWPALLAFGLTMALMFGASALYHTLKAEDRLLAWLRRLDHAAIFLFIA
GSYTPFLAEGLEGGDKALALALVWGLALLGVGFRLLYLKAPRWLYTLAYLALGWLSLFFLPRLHLPLPTLALMALSGLSY
TLGAWVYGTKRPDPWPGRVGFHGVWHVLVLLGSLFMYLAVLSLYT

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Escherichia coli, GI1789266, Length=205, Percent_Identity=37.0731707317073, Blast_Score=110, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 22541; Mature: 22541

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVREPFNALSHALGVPLALLGGLLLLLLAPREAWPALLAFGLTMALMFGASALYHTLKAE
CCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRLLAWLRRLDHAAIFLFIAGSYTPFLAEGLEGGDKALALALVWGLALLGVGFRLLYLKA
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
PRWLYTLAYLALGWLSLFFLPRLHLPLPTLALMALSGLSYTLGAWVYGTKRPDPWPGRVG
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHEECCCCCCCCCCCCC
FHGVWHVLVLLGSLFMYLAVLSLYT
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVREPFNALSHALGVPLALLGGLLLLLLAPREAWPALLAFGLTMALMFGASALYHTLKAE
CCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRLLAWLRRLDHAAIFLFIAGSYTPFLAEGLEGGDKALALALVWGLALLGVGFRLLYLKA
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
PRWLYTLAYLALGWLSLFFLPRLHLPLPTLALMALSGLSYTLGAWVYGTKRPDPWPGRVG
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHEECCCCCCCCCCCCC
FHGVWHVLVLLGSLFMYLAVLSLYT
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]