| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is folC [H]
Identifier: 55981309
GI number: 55981309
Start: 1279845
End: 1281017
Strand: Reverse
Name: folC [H]
Synonym: TTHA1340
Alternate gene names: 55981309
Gene position: 1281017-1279845 (Counterclockwise)
Preceding gene: 55981310
Following gene: 55981297
Centisome position: 69.25
GC content: 73.4
Gene sequence:
>1173_bases GTGACCTACGAGGAGGCTTTGGCCTGGCTCTACGCGAGGCGGCGCACGGGGGAGCGGGGGACCCATAGGGTGCGGGCCCT CCTCGCCCGGCTCGGCCACCCGGAGGCGGGCTTCCTTGCGGTCCACGTCCTGGGGACCAACGGGAAGGGGAGCGTGGTGG CCTACCTCGAGGCCGCCTTCCGCGCCGCGGGCCTCGCCTACGGGGCCTACACCAGCCCCCACCTCGTGGACTTCCGAGAG AGGATCCGCACCCACCTGGGGCCCGTCCCCCGGGAGGCGGTGGTCCGGTTCGTGGCCTGGGCGAGGGAGGAGGCCTGGGA GGAGCCCCCGGGCTTCTTTGACCTGGCCACCGCCCTCGCCTTCCTCCACTTCCGGGAGAGGGGGGTGGCGCTGGCCGCGG TGGAGGCGGGGGTAGGGGGGGAGAAGGACGCGACGAACGCCCTTTCCCGCGTGGCCCTCACCGTGCTCACCAACGTGGGG GAGGACCACCTCGAGGCCCTGGGGGGTACCCTCGAGGCCGTGGCCCGGGAGAAGGCGGGGGCCTTCCGCCCTGGGGTGCC GGTGGTCACGGGGGCGAGGGGGGTGGGGCTGGAGGTGGCCCGCAAGGTGGCGGAAGAACGGGGGGCGCCCCTTTACGTCC TGGACCCCGAGGACCCCCTCTTCGCCCTTCCCGCCCCGCCCGGCCTCAGGGGGGCCTACCAGGAGGAAAACGCCCGCCTG GCCGCCGCCGCCCTGAGGCTTTTGGGCCTTCCCGAGGCGGCCATTGCCCGGGGGCTTCGGGAGGCGCGGCACCCGGGGCG CATGGAGCGCTTCCTCCTTAAGGGGGTGGAGGTCTATTTGGACGGGGCCCACAACCCTCCGGCGGCGGAGGCCCTGGCCC GGGAGTTTTCCGCCTACCACCTGGTCTTTGGCGCCTTTCCCCGGAAGGACGTGAAGGGCGTCCTCGCCCACCTCCTCCCC AAGGCGCGAAGCGTCCGCTACGCCCGGGCGGGGGAAGGGGCCTTGGGCGGGGAGCTCGGGACCCCCTTCTTTGAGGACCC CTGGGAGGCCCTGGAGGACGCCTTGGCGAGGGCGAGGGAGGACGGGCTTCCGGTTTTGGCCACGGGCTCCCTGTACCTGG TGGGGAGGCTCAGGGAGCGTTTAGTCGCGGGCCTCGGCGAGGACCTTCCCTGA
Upstream 100 bases:
>100_bases CCGCAAGGGGAGGCTCGTGGAGGAGGGGAGCCACGAGGAGCTTCTGGCCAAGGGCGGCTACTACGCCGCCTTGTACCGGC TCCAGTTCCAGGAGGCGTGA
Downstream 100 bases:
>100_bases GGTGTCGGCGAAGACCACGCGGCGCACCTTCTGGAGCTCCAAAACCACGTAGGGGCTGGTGAGGGCCTGGGTGGTGATGG CCCCGGGCTTGGGCGCGCCG
Product: folyl-polyglutamate synthetase
Products: NA
Alternate protein names: Folylpoly-gamma-glutamate synthetase; FPGS; Tetrahydrofolate synthase; Tetrahydrofolylpolyglutamate synthase [H]
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MTYEEALAWLYARRRTGERGTHRVRALLARLGHPEAGFLAVHVLGTNGKGSVVAYLEAAFRAAGLAYGAYTSPHLVDFRE RIRTHLGPVPREAVVRFVAWAREEAWEEPPGFFDLATALAFLHFRERGVALAAVEAGVGGEKDATNALSRVALTVLTNVG EDHLEALGGTLEAVAREKAGAFRPGVPVVTGARGVGLEVARKVAEERGAPLYVLDPEDPLFALPAPPGLRGAYQEENARL AAAALRLLGLPEAAIARGLREARHPGRMERFLLKGVEVYLDGAHNPPAAEALAREFSAYHLVFGAFPRKDVKGVLAHLLP KARSVRYARAGEGALGGELGTPFFEDPWEALEDALARAREDGLPVLATGSLYLVGRLRERLVAGLGEDLP
Sequences:
>Translated_390_residues MTYEEALAWLYARRRTGERGTHRVRALLARLGHPEAGFLAVHVLGTNGKGSVVAYLEAAFRAAGLAYGAYTSPHLVDFRE RIRTHLGPVPREAVVRFVAWAREEAWEEPPGFFDLATALAFLHFRERGVALAAVEAGVGGEKDATNALSRVALTVLTNVG EDHLEALGGTLEAVAREKAGAFRPGVPVVTGARGVGLEVARKVAEERGAPLYVLDPEDPLFALPAPPGLRGAYQEENARL AAAALRLLGLPEAAIARGLREARHPGRMERFLLKGVEVYLDGAHNPPAAEALAREFSAYHLVFGAFPRKDVKGVLAHLLP KARSVRYARAGEGALGGELGTPFFEDPWEALEDALARAREDGLPVLATGSLYLVGRLRERLVAGLGEDLP >Mature_389_residues TYEEALAWLYARRRTGERGTHRVRALLARLGHPEAGFLAVHVLGTNGKGSVVAYLEAAFRAAGLAYGAYTSPHLVDFRER IRTHLGPVPREAVVRFVAWAREEAWEEPPGFFDLATALAFLHFRERGVALAAVEAGVGGEKDATNALSRVALTVLTNVGE DHLEALGGTLEAVAREKAGAFRPGVPVVTGARGVGLEVARKVAEERGAPLYVLDPEDPLFALPAPPGLRGAYQEENARLA AAALRLLGLPEAAIARGLREARHPGRMERFLLKGVEVYLDGAHNPPAAEALAREFSAYHLVFGAFPRKDVKGVLAHLLPK ARSVRYARAGEGALGGELGTPFFEDPWEALEDALARAREDGLPVLATGSLYLVGRLRERLVAGLGEDLP
Specific function: Conversion of folates to polyglutamate derivatives. It preferes 5,10-methylenetetrahydrofolate, rather than 10- formyltetrahydrofolate as folate substrate [H]
COG id: COG0285
COG function: function code H; Folylpolyglutamate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the folylpolyglutamate synthase family [H]
Homologues:
Organism=Homo sapiens, GI66932984, Length=296, Percent_Identity=34.4594594594595, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI66932990, Length=296, Percent_Identity=34.4594594594595, Blast_Score=137, Evalue=1e-32, Organism=Escherichia coli, GI1788654, Length=401, Percent_Identity=31.9201995012469, Blast_Score=119, Evalue=4e-28, Organism=Caenorhabditis elegans, GI17553150, Length=303, Percent_Identity=32.013201320132, Blast_Score=136, Evalue=2e-32, Organism=Caenorhabditis elegans, GI17553148, Length=303, Percent_Identity=32.013201320132, Blast_Score=136, Evalue=2e-32, Organism=Caenorhabditis elegans, GI71984923, Length=303, Percent_Identity=32.013201320132, Blast_Score=136, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6323760, Length=420, Percent_Identity=28.3333333333333, Blast_Score=134, Evalue=3e-32, Organism=Saccharomyces cerevisiae, GI6324815, Length=333, Percent_Identity=30.9309309309309, Blast_Score=120, Evalue=3e-28, Organism=Drosophila melanogaster, GI24641571, Length=279, Percent_Identity=29.3906810035842, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24581568, Length=177, Percent_Identity=31.638418079096, Blast_Score=79, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018109 - InterPro: IPR001645 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.17 [H]
Molecular weight: Translated: 41922; Mature: 41791
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYEEALAWLYARRRTGERGTHRVRALLARLGHPEAGFLAVHVLGTNGKGSVVAYLEAAF CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHH RAAGLAYGAYTSPHLVDFRERIRTHLGPVPREAVVRFVAWAREEAWEEPPGFFDLATALA HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH FLHFRERGVALAAVEAGVGGEKDATNALSRVALTVLTNVGEDHLEALGGTLEAVAREKAG HHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC AFRPGVPVVTGARGVGLEVARKVAEERGAPLYVLDPEDPLFALPAPPGLRGAYQEENARL CCCCCCCEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHH AAAALRLLGLPEAAIARGLREARHPGRMERFLLKGVEVYLDGAHNPPAAEALAREFSAYH HHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHH LVFGAFPRKDVKGVLAHLLPKARSVRYARAGEGALGGELGTPFFEDPWEALEDALARARE HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH DGLPVLATGSLYLVGRLRERLVAGLGEDLP CCCCEEECCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TYEEALAWLYARRRTGERGTHRVRALLARLGHPEAGFLAVHVLGTNGKGSVVAYLEAAF CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHH RAAGLAYGAYTSPHLVDFRERIRTHLGPVPREAVVRFVAWAREEAWEEPPGFFDLATALA HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH FLHFRERGVALAAVEAGVGGEKDATNALSRVALTVLTNVGEDHLEALGGTLEAVAREKAG HHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC AFRPGVPVVTGARGVGLEVARKVAEERGAPLYVLDPEDPLFALPAPPGLRGAYQEENARL CCCCCCCEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHH AAAALRLLGLPEAAIARGLREARHPGRMERFLLKGVEVYLDGAHNPPAAEALAREFSAYH HHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHH LVFGAFPRKDVKGVLAHLLPKARSVRYARAGEGALGGELGTPFFEDPWEALEDALARARE HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH DGLPVLATGSLYLVGRLRERLVAGLGEDLP CCCCEEECCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8419299; 9384377; 2553669 [H]