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The map label for this gene is cycA [H]

Identifier: 55981295

GI number: 55981295

Start: 1265699

End: 1266391

Strand: Direct

Name: cycA [H]

Synonym: TTHA1326

Alternate gene names: 55981295

Gene position: 1265699-1266391 (Clockwise)

Preceding gene: 55981294

Following gene: 55981296

Centisome position: 68.43

GC content: 67.82

Gene sequence:

>693_bases
ATGAAGCGCATCCTTTTACCCCCAGCCCTTCTCCTGGGCCTTGGCGCCCTCCTGGCCCTGAGCCAGACCACCCTCCCCGA
GGGCCCGGGCAAGGAGCTGGTGCTGGCCAAGTGCCAAACCTGCCACGACATCGGCTTTGTCGCTAGGGAGAGGCTCTCCC
GGGAAAGGTGGGACGTGGTCCTGAGCGAGATGGTCATGCGGGGACTCCAGGTCACCCCCGAGGAGCGCGGCCGCATCCTG
GACTACCTGGCCACCTACCTGGGCACGGAACCCCCGCCAGCCACGCCCCCAGCCCAGGAGACCCCTGCCCCCAAAACGGG
AGCCCAGGTCTACGCCAACTGCCAGGGCTGCCACGGACCCCAGGGCGAGGGCAACCCTCCCACCTTCCCGCCCCTCAAGG
GCCATGTGGAAAAGCTCCTGCGGGCGGAAGGCGGGAGGGCTTACCTTCTTGCGGTGGTGCTCTACGGGGTCCAGGGGCCC
ATGAAGGTCCTAGGCCAGGAGTACAACAACGTGATGCCCGGCTTCTCCTGGCTTTCCGACGAGGAGCTGGCCCTGGTGCT
GAACCACCTGGCCGCCTGGGGCGCCCCCGAGGGCTTCCGTCCCTACAAGCCGGAGGAGGTGCAGGCGGCGAGGGCCAAAC
CCCTCACCCCCGAGGAGGTTCTGAAGCTCCGCCAAGGCCTCAAACTGCCATGA

Upstream 100 bases:

>100_bases
TCACCGTGGCCTAAAGGGCTTGGCCCCGGCCTTAGGGCCGGGGCCTTTGTGGGCCAGCTCCCTATACCCAGCTAGGGTAC
GCCCCACACTGAGACCTGAG

Downstream 100 bases:

>100_bases
AGGGGCAGGTGGTCTCCCTCCACCTCGGCTTAGGCTCCGGCCTCCCCAAGCCGCGGGTGGAGGCCTTGGAGCTCGTGGCG
GGCTTTGGGGCCAAGGGGGA

Product: cytochrome C-552 like protein

Products: NA

Alternate protein names: Cytochrome c552 [H]

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKRILLPPALLLGLGALLALSQTTLPEGPGKELVLAKCQTCHDIGFVARERLSRERWDVVLSEMVMRGLQVTPEERGRIL
DYLATYLGTEPPPATPPAQETPAPKTGAQVYANCQGCHGPQGEGNPPTFPPLKGHVEKLLRAEGGRAYLLAVVLYGVQGP
MKVLGQEYNNVMPGFSWLSDEELALVLNHLAAWGAPEGFRPYKPEEVQAARAKPLTPEEVLKLRQGLKLP

Sequences:

>Translated_230_residues
MKRILLPPALLLGLGALLALSQTTLPEGPGKELVLAKCQTCHDIGFVARERLSRERWDVVLSEMVMRGLQVTPEERGRIL
DYLATYLGTEPPPATPPAQETPAPKTGAQVYANCQGCHGPQGEGNPPTFPPLKGHVEKLLRAEGGRAYLLAVVLYGVQGP
MKVLGQEYNNVMPGFSWLSDEELALVLNHLAAWGAPEGFRPYKPEEVQAARAKPLTPEEVLKLRQGLKLP
>Mature_230_residues
MKRILLPPALLLGLGALLALSQTTLPEGPGKELVLAKCQTCHDIGFVARERLSRERWDVVLSEMVMRGLQVTPEERGRIL
DYLATYLGTEPPPATPPAQETPAPKTGAQVYANCQGCHGPQGEGNPPTFPPLKGHVEKLLRAEGGRAYLLAVVLYGVQGP
MKVLGQEYNNVMPGFSWLSDEELALVLNHLAAWGAPEGFRPYKPEEVQAARAKPLTPEEVLKLRQGLKLP

Specific function: This monoheme basic protein appears to function as an electron donor to cytochrome oxidase in T.thermophilus [H]

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 25054; Mature: 25054

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILLPPALLLGLGALLALSQTTLPEGPGKELVLAKCQTCHDIGFVARERLSRERWDVV
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSEMVMRGLQVTPEERGRILDYLATYLGTEPPPATPPAQETPAPKTGAQVYANCQGCHGP
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHEECCCCCCCC
QGEGNPPTFPPLKGHVEKLLRAEGGRAYLLAVVLYGVQGPMKVLGQEYNNVMPGFSWLSD
CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCC
EELALVLNHLAAWGAPEGFRPYKPEEVQAARAKPLTPEEVLKLRQGLKLP
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MKRILLPPALLLGLGALLALSQTTLPEGPGKELVLAKCQTCHDIGFVARERLSRERWDVV
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSEMVMRGLQVTPEERGRILDYLATYLGTEPPPATPPAQETPAPKTGAQVYANCQGCHGP
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHEECCCCCCCC
QGEGNPPTFPPLKGHVEKLLRAEGGRAYLLAVVLYGVQGPMKVLGQEYNNVMPGFSWLSD
CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCC
EELALVLNHLAAWGAPEGFRPYKPEEVQAARAKPLTPEEVLKLRQGLKLP
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2986626; 11152119 [H]