| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981294
Identifier: 55981294
GI number: 55981294
Start: 1264389
End: 1265612
Strand: Direct
Name: 55981294
Synonym: TTHA1325
Alternate gene names: NA
Gene position: 1264389-1265612 (Clockwise)
Preceding gene: 55981291
Following gene: 55981295
Centisome position: 68.35
GC content: 65.2
Gene sequence:
>1224_bases ATGGAAAGCGTCAGCCGGCGAACCGCCCTGAAGCTCATGGGCCTAGGGGCAGCGCTTTTGGCCGCGGGAAGCCGAGGCTT CGCCCAGCAAGCCCCCACGGCCGACCAGTTGGTGAAGGGGAAAAACCCCAAGCTCTTGGTTCTCTCCCAACGCCCCATCG TTTTGGAAACTCCTTATGACCTCTTGGTCAGCCAGCCCGAGCGCACCCCTAAGGAGATCCTCTACATCCGCAACAACGTG GACCTCCCCGGCTACAACACCGTGGAGGGGGCCAGCCTGGACGGGTGGAAGGTGGAGGTGGGGGGACTGGTGGACAAACC CTTCACCTTTGAGGCCAAGGAGCTCCTCGAGCTTCCCCAGCACGAGGTGACCATGGTCCTCCAGTGCTCCGGCAACGGGC GTTCCCTCTTCCAGCCCCGCACCTCGGGCAACCCCTGGAAACGGGGTGGGGTGGGGAACGTCACCTTCCGTGGGGTGCGC CTTAAGGACCTTCTAGAGGCCAAAGGGGTGAAGCTCGGTGAAAAGGCCCTCTACATCACCGCCCACGCCAGCCGTCAGGG CAACGCCCCGGAGTTCGTGCGCTCCGTGCCCATCCACGCCCTTGGGCATGCCCTTCTGGCCCTTTCCATGAACGGGGAAC CCCTACCCGCGGTGCACGGGGGGCCCATCCGCCTGGTCTTCCCTGGCTACTTCGGGGTGAACAACGTGAAGTGGGTGCAG AAGATTGAGTTCACCGAGGCGGAGAACACCACCGCCGAGCAGATGCCCCGCTACCGGGTGCCCGCCATCCCCAACGCCAA CATTCCCTTCCTCCCCCAGGAGCCGGGCAAGACCTACCCCTACAGCTTCACCAACTCCCGCCCCAACTGGCTCGTGGCCA TCAACAGCTTCATCTTCGCCCCCTTGGAGGGCCAGACCGTGGAAGGCCCCTACGTGCGGGTGGAGGGGGTGGCCTTCAAC GACGGCATCGTGCCCTTGGTGAGCGTAGAGGTCTCCGCCAACGGGGGCCGCACCTGGCAGCAGGCCAGGCTGGAACGCCA GGAGAAGAGCTTCGGCTGGGTTCGCTGGCAGGCCACCTTGTACCTGCGCCCTGGGGAACACGAGGTCATGGCCCGGGCCT GGGACGCCGTGGGCCGCAGCCAGCCCCTGGACGGCAACATCGCCTGGAACGAACGGGGTTACGAGTACAACGGGGTCATG CGGGTCAAGTTCACCGTGGCCTAA
Upstream 100 bases:
>100_bases TAACCCCCACTTGACATGGGTGTTGTTTGCCACCTAGATTAGGGGCAACCGGAAAGTGGGGACAAACGTCCCCCCGGACC CTTGGAGGGAGGGATAAGGT
Downstream 100 bases:
>100_bases AGGGCTTGGCCCCGGCCTTAGGGCCGGGGCCTTTGTGGGCCAGCTCCCTATACCCAGCTAGGGTACGCCCCACACTGAGA CCTGAGATGAAGCGCATCCT
Product: putaitve sulfite oxidase
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; Oxidoreductase; SulfiteCytochrome C Oxidoreductase Subunit A; Sulfite Dehydrogenase Subunit SorA Apoprotein; Nitrate Reductase; Sulfite Dehydrogenase; Membrane-Bound Oxidoreductase; Sulfite-Dehydrogenase; Sulfite Oxidase And ; Sulfite Dehydrogenase SoxC Protein; Sulfite Oxidase SoxC; Molybdopterin Oxidoreductase Family Protein; Sulfur Oxidation Molybdopterin C Protein; Mo-Co Oxidoreductase Dimerisation Subunit; Molybdopterin Oxidoreductase; Sulfite Dehydrogenase Subunit Sora Apoprotein; Sulfite Oxidase Molybdopterin Subunit; SulfiteCytochrome C Oxidoreductase Oxidoreductase Protein; Sulfite Dehydrogenase SoxC; Sulfite Oxidase-Like Protein; Sulfite Oxidase And Related S; Sulfite Dehydrogenase SoxC/D Homolog; Mo-Co Oxidoreductase Dimerisation Domain; Molybdopterin Dependent Oxidoreductase; Sulfur Oxidation Protein SoxC; Cytochrome C Dehydrogenase-Like Protein; LigA Protein; Sufite Oxidase; Sulfite Reductase; Molybdopterin Oxidoreductase Domain-Containing Protein; Sulfite Oxidase Or ; Oxidase; Sulfur Dehydrogenase Subunit SoxC; Cytrochrome C Oxidoreductase Subunit A; Molybdenum Containing Oxidoreductase; Putaitve Sulfite Oxidase
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MESVSRRTALKLMGLGAALLAAGSRGFAQQAPTADQLVKGKNPKLLVLSQRPIVLETPYDLLVSQPERTPKEILYIRNNV DLPGYNTVEGASLDGWKVEVGGLVDKPFTFEAKELLELPQHEVTMVLQCSGNGRSLFQPRTSGNPWKRGGVGNVTFRGVR LKDLLEAKGVKLGEKALYITAHASRQGNAPEFVRSVPIHALGHALLALSMNGEPLPAVHGGPIRLVFPGYFGVNNVKWVQ KIEFTEAENTTAEQMPRYRVPAIPNANIPFLPQEPGKTYPYSFTNSRPNWLVAINSFIFAPLEGQTVEGPYVRVEGVAFN DGIVPLVSVEVSANGGRTWQQARLERQEKSFGWVRWQATLYLRPGEHEVMARAWDAVGRSQPLDGNIAWNERGYEYNGVM RVKFTVA
Sequences:
>Translated_407_residues MESVSRRTALKLMGLGAALLAAGSRGFAQQAPTADQLVKGKNPKLLVLSQRPIVLETPYDLLVSQPERTPKEILYIRNNV DLPGYNTVEGASLDGWKVEVGGLVDKPFTFEAKELLELPQHEVTMVLQCSGNGRSLFQPRTSGNPWKRGGVGNVTFRGVR LKDLLEAKGVKLGEKALYITAHASRQGNAPEFVRSVPIHALGHALLALSMNGEPLPAVHGGPIRLVFPGYFGVNNVKWVQ KIEFTEAENTTAEQMPRYRVPAIPNANIPFLPQEPGKTYPYSFTNSRPNWLVAINSFIFAPLEGQTVEGPYVRVEGVAFN DGIVPLVSVEVSANGGRTWQQARLERQEKSFGWVRWQATLYLRPGEHEVMARAWDAVGRSQPLDGNIAWNERGYEYNGVM RVKFTVA >Mature_407_residues MESVSRRTALKLMGLGAALLAAGSRGFAQQAPTADQLVKGKNPKLLVLSQRPIVLETPYDLLVSQPERTPKEILYIRNNV DLPGYNTVEGASLDGWKVEVGGLVDKPFTFEAKELLELPQHEVTMVLQCSGNGRSLFQPRTSGNPWKRGGVGNVTFRGVR LKDLLEAKGVKLGEKALYITAHASRQGNAPEFVRSVPIHALGHALLALSMNGEPLPAVHGGPIRLVFPGYFGVNNVKWVQ KIEFTEAENTTAEQMPRYRVPAIPNANIPFLPQEPGKTYPYSFTNSRPNWLVAINSFIFAPLEGQTVEGPYVRVEGVAFN DGIVPLVSVEVSANGGRTWQQARLERQEKSFGWVRWQATLYLRPGEHEVMARAWDAVGRSQPLDGNIAWNERGYEYNGVM RVKFTVA
Specific function: Unknown
COG id: COG2041
COG function: function code R; Sulfite oxidase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI74099704, Length=390, Percent_Identity=29.4871794871795, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI74099702, Length=390, Percent_Identity=29.4871794871795, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI74099694, Length=390, Percent_Identity=29.4871794871795, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI71992535, Length=396, Percent_Identity=27.2727272727273, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI18859905, Length=379, Percent_Identity=31.6622691292876, Blast_Score=148, Evalue=7e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44967; Mature: 44967
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESVSRRTALKLMGLGAALLAAGSRGFAQQAPTADQLVKGKNPKLLVLSQRPIVLETPYD CCCHHHHHHHHHHHCCHHHHHCCCCCCHHCCCCHHHHHCCCCCCEEEEECCCEEEECCHH LLVSQPERTPKEILYIRNNVDLPGYNTVEGASLDGWKVEVGGLVDKPFTFEAKELLELPQ HEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCEECCCCCCCHHHHHHCCC HEVTMVLQCSGNGRSLFQPRTSGNPWKRGGVGNVTFRGVRLKDLLEAKGVKLGEKALYIT CEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCEEEECEEHHHHHHHCCCEECCEEEEEE AHASRQGNAPEFVRSVPIHALGHALLALSMNGEPLPAVHGGPIRLVFPGYFGVNNVKWVQ EECCCCCCCHHHHHHCCHHHHCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCEEEE KIEFTEAENTTAEQMPRYRVPAIPNANIPFLPQEPGKTYPYSFTNSRPNWLVAINSFIFA EEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEEEEE PLEGQTVEGPYVRVEGVAFNDGIVPLVSVEVSANGGRTWQQARLERQEKSFGWVRWQATL CCCCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEE YLRPGEHEVMARAWDAVGRSQPLDGNIAWNERGYEYNGVMRVKFTVA EEECCCHHHHHHHHHHHCCCCCCCCCEEECCCCEEECCEEEEEEEEC >Mature Secondary Structure MESVSRRTALKLMGLGAALLAAGSRGFAQQAPTADQLVKGKNPKLLVLSQRPIVLETPYD CCCHHHHHHHHHHHCCHHHHHCCCCCCHHCCCCHHHHHCCCCCCEEEEECCCEEEECCHH LLVSQPERTPKEILYIRNNVDLPGYNTVEGASLDGWKVEVGGLVDKPFTFEAKELLELPQ HEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCEECCCCCCCHHHHHHCCC HEVTMVLQCSGNGRSLFQPRTSGNPWKRGGVGNVTFRGVRLKDLLEAKGVKLGEKALYIT CEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCEEEECEEHHHHHHHCCCEECCEEEEEE AHASRQGNAPEFVRSVPIHALGHALLALSMNGEPLPAVHGGPIRLVFPGYFGVNNVKWVQ EECCCCCCCHHHHHHCCHHHHCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCEEEE KIEFTEAENTTAEQMPRYRVPAIPNANIPFLPQEPGKTYPYSFTNSRPNWLVAINSFIFA EEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEEEEE PLEGQTVEGPYVRVEGVAFNDGIVPLVSVEVSANGGRTWQQARLERQEKSFGWVRWQATL CCCCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEE YLRPGEHEVMARAWDAVGRSQPLDGNIAWNERGYEYNGVMRVKFTVA EEECCCHHHHHHHHHHHCCCCCCCCCEEECCCCEEECCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA