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The map label for this gene is 55981284

Identifier: 55981284

GI number: 55981284

Start: 1253595

End: 1254794

Strand: Reverse

Name: 55981284

Synonym: TTHA1315

Alternate gene names: NA

Gene position: 1254794-1253595 (Counterclockwise)

Preceding gene: 55981288

Following gene: 55981279

Centisome position: 67.84

GC content: 70.5

Gene sequence:

>1200_bases
GTGCTGGCGCTCGCCCTTCTCAAAGACCCCGGGTACCGGAGCTACTGGCTCGCCCTCTTCGCCTCCCAGATGGGCACCTG
GATGCAGGCCGCGGCCCAGGGCTGGCTCGTCTTGCTCCTTACGGGAAGCGCCGAGCGGCTCGGCCTCGTGGTGGCCCTCC
AGTTTCTGCCCTCCCTCCTCTTTTCCCTGCCCGCCGGGGTCCTGGCCGACCGCTACCCCAAGCGGGACCTCCTCCGCTTC
ACCCAGGGGGGGATGACCCTCCTCGCCCTGGCCATGGCCTTCTTGGTCTACACGGGCTGGGTGCGGTACGGGCACGTCCT
CCTCTTCGCCTTCCTCTACGGGGCCCTGAACGCCATGGACCAGCCCGTGCGCCAGAGCTTCACCGTGGAGCTCGCGGGGA
AGGAGCGCTACCCCGGGGCCATCGCCTTGAACTCCTTCGGCTTCAACACGAGCCGCCTCGTGGGGCCCGCCGTCGCGGGC
TTCCTCATCGCCTTCTACGGCGTGGGGGCCGCTTACCTCGCCAACGCCCTGTCCTTCCTGCCCATCCTCTGGGTGCTCTC
CCGCCTGCCTCGAGGCGAGGGGAACGGGGTCGTCCAGGGACGCTGGTGGACGGAGGCCCTGGAGGGGATCCGGTTCGTCC
TGGGGCACCCCGTGGTGCGGCGGGTGGTGGGCTTGATCCTCTTCGCCACCCTTTTGGGCATGAACTTCCAGACCCTGGTG
CCGGCCTACGCCCGCCTCGTCCTCGGCCTTTCCGCCACGGGGTACGGCTTCCTCCTCTCCAGCGTGGGCGTGGGGGCGAT
CCTCGCCGCCTTGATCATGGCCTTCACCGGCAGGCCCAGGCCCTGGCGCCTCGTCCTCGGCCTCTTCGCCCTGGCCCTGG
CCCACCTGGGCCTCGCCCTGAAGCTTCCCGGCCTCGTGCCGCTCTTCCTCGCCGTGGGGGGCTTCGGGATGATCTCCGTC
CTCATCAACGCCAACACCCTGGTCCAGCTCTCCGTGCCCGACCGGCTTCGGGGCCGGGTCATGGCCGTCTACAGCCTGGT
GATGCTGGGCACGGGGCCCTTGGGCGCCTACCTTACGGGCTTCCTCTTTGAGGCCCTGGGGGGGCGGAGGGCGGCGCTCG
TCCTGGGGCTGGCCCTCCTCGCCGTGGGGGCCTTCCAGCTCCTCCGCCCCTGGCCTAGGGACGCCAGTCCTCAGGCCTAG

Upstream 100 bases:

>100_bases
CAGGCGGAAGAGGAAGATCCCGTGCTGGAACACGCCTCAGTATAGGGGCGGGTGGGGCGCGGGGGTGTAATGACCGGTCA
GTCAGGGTTAGCATGGAGGG

Downstream 100 bases:

>100_bases
GCCCGAGGCCGAGCCGCCAGGCCACCCCTCGCGCCACCCTGAGCCCCGCCTTTCCGTCCCCGTAGGGGTTCTTGGCCTTC
CGCATGCGGGAAAGCTCCTC

Product: integral membrane efflux protein

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Integral Membrane Efflux Protein; Facilitator Superfamily Permease; Facilitator Superfamily Transporter; Transmembrane Efflux Protein; Multidrug ABC Transporter; Arabinose Efflux Permease Family Protein; MFS Permease; Permeases Of Facilitator Superfamily; Permease; Mfs Transporter; Facilitator MFS1 Protein; Permease Of Facilitator Superfamily; Transporter Facilitator Family Protein; MFS Family Transporter; Drug Resistance Efflux Protein; MFS Family Transporter Protein; Transporter Facilitator Family; Arabinose Efflux Permease; Permease Of Facilitator Superfamily Protein; ABC Transporter Permease Protein; MFS Family Membrane Efflux Protein; Macrolide-Efflux Protein; Facilitator Superfamily Multidrug Efflux Transporter; Membrane Efflux Protein MFS; Facilitator Family Transporter; Transport Transmembrane Protein; MFS Superfamily Transporter; Permeases Of Facilitator Superfamily Protein

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MLALALLKDPGYRSYWLALFASQMGTWMQAAAQGWLVLLLTGSAERLGLVVALQFLPSLLFSLPAGVLADRYPKRDLLRF
TQGGMTLLALAMAFLVYTGWVRYGHVLLFAFLYGALNAMDQPVRQSFTVELAGKERYPGAIALNSFGFNTSRLVGPAVAG
FLIAFYGVGAAYLANALSFLPILWVLSRLPRGEGNGVVQGRWWTEALEGIRFVLGHPVVRRVVGLILFATLLGMNFQTLV
PAYARLVLGLSATGYGFLLSSVGVGAILAALIMAFTGRPRPWRLVLGLFALALAHLGLALKLPGLVPLFLAVGGFGMISV
LINANTLVQLSVPDRLRGRVMAVYSLVMLGTGPLGAYLTGFLFEALGGRRAALVLGLALLAVGAFQLLRPWPRDASPQA

Sequences:

>Translated_399_residues
MLALALLKDPGYRSYWLALFASQMGTWMQAAAQGWLVLLLTGSAERLGLVVALQFLPSLLFSLPAGVLADRYPKRDLLRF
TQGGMTLLALAMAFLVYTGWVRYGHVLLFAFLYGALNAMDQPVRQSFTVELAGKERYPGAIALNSFGFNTSRLVGPAVAG
FLIAFYGVGAAYLANALSFLPILWVLSRLPRGEGNGVVQGRWWTEALEGIRFVLGHPVVRRVVGLILFATLLGMNFQTLV
PAYARLVLGLSATGYGFLLSSVGVGAILAALIMAFTGRPRPWRLVLGLFALALAHLGLALKLPGLVPLFLAVGGFGMISV
LINANTLVQLSVPDRLRGRVMAVYSLVMLGTGPLGAYLTGFLFEALGGRRAALVLGLALLAVGAFQLLRPWPRDASPQA
>Mature_399_residues
MLALALLKDPGYRSYWLALFASQMGTWMQAAAQGWLVLLLTGSAERLGLVVALQFLPSLLFSLPAGVLADRYPKRDLLRF
TQGGMTLLALAMAFLVYTGWVRYGHVLLFAFLYGALNAMDQPVRQSFTVELAGKERYPGAIALNSFGFNTSRLVGPAVAG
FLIAFYGVGAAYLANALSFLPILWVLSRLPRGEGNGVVQGRWWTEALEGIRFVLGHPVVRRVVGLILFATLLGMNFQTLV
PAYARLVLGLSATGYGFLLSSVGVGAILAALIMAFTGRPRPWRLVLGLFALALAHLGLALKLPGLVPLFLAVGGFGMISV
LINANTLVQLSVPDRLRGRVMAVYSLVMLGTGPLGAYLTGFLFEALGGRRAALVLGLALLAVGAFQLLRPWPRDASPQA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42792; Mature: 42792

Theoretical pI: Translated: 11.18; Mature: 11.18

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLALALLKDPGYRSYWLALFASQMGTWMQAAAQGWLVLLLTGSAERLGLVVALQFLPSLL
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHH
FSLPAGVLADRYPKRDLLRFTQGGMTLLALAMAFLVYTGWVRYGHVLLFAFLYGALNAMD
HHCCHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QPVRQSFTVELAGKERYPGAIALNSFGFNTSRLVGPAVAGFLIAFYGVGAAYLANALSFL
HHHHHHEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PILWVLSRLPRGEGNGVVQGRWWTEALEGIRFVLGHPVVRRVVGLILFATLLGMNFQTLV
HHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHH
PAYARLVLGLSATGYGFLLSSVGVGAILAALIMAFTGRPRPWRLVLGLFALALAHLGLAL
HHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHH
KLPGLVPLFLAVGGFGMISVLINANTLVQLSVPDRLRGRVMAVYSLVMLGTGPLGAYLTG
CCCCHHHHHHHHCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHH
FLFEALGGRRAALVLGLALLAVGAFQLLRPWPRDASPQA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLALALLKDPGYRSYWLALFASQMGTWMQAAAQGWLVLLLTGSAERLGLVVALQFLPSLL
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHH
FSLPAGVLADRYPKRDLLRFTQGGMTLLALAMAFLVYTGWVRYGHVLLFAFLYGALNAMD
HHCCHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
QPVRQSFTVELAGKERYPGAIALNSFGFNTSRLVGPAVAGFLIAFYGVGAAYLANALSFL
HHHHHHEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PILWVLSRLPRGEGNGVVQGRWWTEALEGIRFVLGHPVVRRVVGLILFATLLGMNFQTLV
HHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHH
PAYARLVLGLSATGYGFLLSSVGVGAILAALIMAFTGRPRPWRLVLGLFALALAHLGLAL
HHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHH
KLPGLVPLFLAVGGFGMISVLINANTLVQLSVPDRLRGRVMAVYSLVMLGTGPLGAYLTG
CCCCHHHHHHHHCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHH
FLFEALGGRRAALVLGLALLAVGAFQLLRPWPRDASPQA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA