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The map label for this gene is 55981279

Identifier: 55981279

GI number: 55981279

Start: 1248850

End: 1249923

Strand: Reverse

Name: 55981279

Synonym: TTHA1310

Alternate gene names: NA

Gene position: 1249923-1248850 (Counterclockwise)

Preceding gene: 55981284

Following gene: 55981277

Centisome position: 67.57

GC content: 69.93

Gene sequence:

>1074_bases
ATGGAGCTCCTCCGGCCCGAGGCCACGGTCCTTTCCCTGGGGAGGCGGGTCCTTTCCTTTGACCGGGAGGGAAGGCCCTA
CCACTACTTCCGCGAGGGGAAGACCTACAAGCGCGCCCTGGACGGGAGCCTCCACCTCCGCTACCGGGAAGGGGAGAGGA
GGCGGAGAAGGCTTGCCCCCGAGGAGGCCCTTGGGGTCTACCAGGAGGTCCTGGACCTGGCCGAGGCCCACCTGCGGGAC
GAAAGGAGGCGGGAGGAGGTGCTCCGCTGGACCCCCGAGGGCCTCCTGGACCCCACGCCCTACCGCAGGGCCTACGCCTG
GCCCGTGAGCATCCTTCCCCCCGACGCCTACCTCTCCGTGGTCCTACAGGCCACCACGGGATGCACCTGGAACCGCTGCG
CCTTCTGCAGCTTCTACCAGGACCGCCCCTTCCAGAAGCGAACCCCCGAGGCTTTCCGGGAGCACATCCAGGCCGTCTTG
GCCCTGCTCGGGCGGGGCAGGCTTCTTAGGCGCGGGGTCTTCCTCGCGGACGGGAACGCCCTCGCCCTCTCCGAGCCCCT
TCTTCCCCTCCTGGAGCTCGTGCGGGCCCACTTCCCCGGGGAGCCCGTGATGGGGTTTCTGGACCTCTTCACCGGCCTGA
AGAAAGCCCCTTCCTGGTGGGAAAGGCTTGGGGGTATGGGCCTCCGGCGGGTCTACATCGGCCTGGAGACGGGGCACGCC
CCCCTCCTCGCCCTCCTCCGGAAGCCCGGCCACCCCAAGGAGGTCCTGCCCCTGGTCCGGGCGTTGAAGGCGGCGGGGCT
TTCCGTGGGGGTGATCCTCATGGTGGGGGCGGGGGGAAAGGCCTTCGCCGAGGCCCACTTCCGGGAAAGCCTCGCCCTCC
TCGCGGAGCTTCCCTTGGGGAGAGGGGACGTGGTCTACCTCTCCCCCTTCCGGGAGGACCCCGGCACCCCGTACGCCGCC
CTCGGCCTTGCTCCCTTGGAGGACCTCGAGGGGGAACTCCAAAGGTGGGCCCAGGCGGTGCGTCGCCTCGGCCTCAGGGC
CTCCCGGTACGAGATCCGGGAGTTCCTCTACTGA

Upstream 100 bases:

>100_bases
CCCGGGCCTCAAACCCGCCCAGGGGGGTGAGGCGCCTTAGGCGTTCGGGGGGAAGGAGGGCCTTGAGGGCGGCGACGGCC
ACGGGGCTTATTCTAGCCCT

Downstream 100 bases:

>100_bases
ACCTCCAACTCCCCCTTCTCCGCAAGGAAGCCCGCCTCCTTGTGGCTCCCGTCGCAGAAGGGCTTCTCCCGGGACCGGCC
GCAGCGGCAGAGGGCGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Fe-S Oxidoreductase; Oxygen-Independent Coproporphyrinogen III Oxidase; Radical SAM Family Protein; Radical Sam Domain Protein

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MELLRPEATVLSLGRRVLSFDREGRPYHYFREGKTYKRALDGSLHLRYREGERRRRRLAPEEALGVYQEVLDLAEAHLRD
ERRREEVLRWTPEGLLDPTPYRRAYAWPVSILPPDAYLSVVLQATTGCTWNRCAFCSFYQDRPFQKRTPEAFREHIQAVL
ALLGRGRLLRRGVFLADGNALALSEPLLPLLELVRAHFPGEPVMGFLDLFTGLKKAPSWWERLGGMGLRRVYIGLETGHA
PLLALLRKPGHPKEVLPLVRALKAAGLSVGVILMVGAGGKAFAEAHFRESLALLAELPLGRGDVVYLSPFREDPGTPYAA
LGLAPLEDLEGELQRWAQAVRRLGLRASRYEIREFLY

Sequences:

>Translated_357_residues
MELLRPEATVLSLGRRVLSFDREGRPYHYFREGKTYKRALDGSLHLRYREGERRRRRLAPEEALGVYQEVLDLAEAHLRD
ERRREEVLRWTPEGLLDPTPYRRAYAWPVSILPPDAYLSVVLQATTGCTWNRCAFCSFYQDRPFQKRTPEAFREHIQAVL
ALLGRGRLLRRGVFLADGNALALSEPLLPLLELVRAHFPGEPVMGFLDLFTGLKKAPSWWERLGGMGLRRVYIGLETGHA
PLLALLRKPGHPKEVLPLVRALKAAGLSVGVILMVGAGGKAFAEAHFRESLALLAELPLGRGDVVYLSPFREDPGTPYAA
LGLAPLEDLEGELQRWAQAVRRLGLRASRYEIREFLY
>Mature_357_residues
MELLRPEATVLSLGRRVLSFDREGRPYHYFREGKTYKRALDGSLHLRYREGERRRRRLAPEEALGVYQEVLDLAEAHLRD
ERRREEVLRWTPEGLLDPTPYRRAYAWPVSILPPDAYLSVVLQATTGCTWNRCAFCSFYQDRPFQKRTPEAFREHIQAVL
ALLGRGRLLRRGVFLADGNALALSEPLLPLLELVRAHFPGEPVMGFLDLFTGLKKAPSWWERLGGMGLRRVYIGLETGHA
PLLALLRKPGHPKEVLPLVRALKAAGLSVGVILMVGAGGKAFAEAHFRESLALLAELPLGRGDVVYLSPFREDPGTPYAA
LGLAPLEDLEGELQRWAQAVRRLGLRASRYEIREFLY

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40467; Mature: 40467

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLRPEATVLSLGRRVLSFDREGRPYHYFREGKTYKRALDGSLHLRYREGERRRRRLAP
CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHCCCCEEEEECCHHHHHHHCCC
EEALGVYQEVLDLAEAHLRDERRREEVLRWTPEGLLDPTPYRRAYAWPVSILPPDAYLSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCHHHHHH
VLQATTGCTWNRCAFCSFYQDRPFQKRTPEAFREHIQAVLALLGRGRLLRRGVFLADGNA
HHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCEEEECCCE
LALSEPLLPLLELVRAHFPGEPVMGFLDLFTGLKKAPSWWERLGGMGLRRVYIGLETGHA
EECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEECCCCH
PLLALLRKPGHPKEVLPLVRALKAAGLSVGVILMVGAGGKAFAEAHFRESLALLAELPLG
HHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC
RGDVVYLSPFREDPGTPYAALGLAPLEDLEGELQRWAQAVRRLGLRASRYEIREFLY
CCCEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MELLRPEATVLSLGRRVLSFDREGRPYHYFREGKTYKRALDGSLHLRYREGERRRRRLAP
CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHCCCCEEEEECCHHHHHHHCCC
EEALGVYQEVLDLAEAHLRDERRREEVLRWTPEGLLDPTPYRRAYAWPVSILPPDAYLSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCHHHHHH
VLQATTGCTWNRCAFCSFYQDRPFQKRTPEAFREHIQAVLALLGRGRLLRRGVFLADGNA
HHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCEEEECCCE
LALSEPLLPLLELVRAHFPGEPVMGFLDLFTGLKKAPSWWERLGGMGLRRVYIGLETGHA
EECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEECCCCH
PLLALLRKPGHPKEVLPLVRALKAAGLSVGVILMVGAGGKAFAEAHFRESLALLAELPLG
HHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC
RGDVVYLSPFREDPGTPYAALGLAPLEDLEGELQRWAQAVRRLGLRASRYEIREFLY
CCCEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA