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The map label for this gene is med [H]

Identifier: 55981270

GI number: 55981270

Start: 1240955

End: 1242094

Strand: Reverse

Name: med [H]

Synonym: TTHA1301

Alternate gene names: 55981270

Gene position: 1242094-1240955 (Counterclockwise)

Preceding gene: 55981271

Following gene: 55981269

Centisome position: 67.15

GC content: 67.63

Gene sequence:

>1140_bases
ATGCAACGACTCGTTCTCGGGGTTCTCGCCGCCCTGGGCCTCGCCCTAGGGCAGGGGGAAAAGCTCAAGGCCTGTTTCAT
CTACGTGGGCCCGGTGGGGGACGCGGGCTGGACCTACGCCCACGACGTGGGCCGGAAGAAGGCGGAGGCGGCCCTCCCGT
GGCTTGAGACCCGGTACGTGGAGAGCGTTCCCGAAGCCCAGGTGGTGCCGGTCATTGACCGGTTCGTGCGGGAGGGGTGC
CGGGTCATCTTCGCGACCAGCTTCGGGTACATGGACGGGGTCCTCGAGGCCGCCAAGAAGTACCCGGACGTCATCTTCGC
CCACGCCACGGGCATCAAGCGGGCCCCCAACGTGGCCACCTACATGGCCGACTTCTACCAGGTCTACTACCTGAACGGCC
TCGCCGCCGGGGCCCTCACCAAGACGGGCAAGGTGGGGTACGTGGCCGCCTTCCCCATCCCCGAGGTGAAGCGGCACATC
AACGCCTTCGCCCTCGGGGTGCGGGCCGTCCGGCCCGACGCCCAGGTGCTGGTGCGCTGGATCAACGCCTGGTACGACCC
GGCCAAGGCCCGGGAGGCCACGGAGGCCCTCCTCGCCCAAGGGGCGGACGTCTTCGCCTTCACCGAGGACACCCCCACGG
TGATCCAGACCGCCGCCCGCAAGGGGGCCTATTCCTTCGGCCACTACACCCCCATGCTCAAGTTCGCCCCCGACCACGTG
GTCTCGGGCCAGATCGTCCACTGGGACGTCATCTACATTGACTTCCTCAAGAAGGTGAAGGAAGGGGTCTACACCCCCAA
GAACCTGGAGAACGTGGACTACTTCTGGCTCCTCCAGCACGGGGCCGTGGAGATGGGGGCGGACTACGGCGTCCCCATCA
ACCCCAAGCACGTTCCCCTGCTGAAGGCCGCCCAGATGAGCGTGGAGGGCAAGAAGGTTCCGGTCTACGACCGGATCATG
TCCCTTCTTGGGGCGATGAAGCGCCCGAACCCCACCTTTGACCCCTTCACCGGCCCCATCAAGGACCGCAAGGGGGTGGT
GCGCATCCCCGCCGGGCGCAAGGCGACCCTTAACGAGCTCCTCACCATGGAGTGGGCCGCCCCCGGCGTGGTGGGCGACT
GGCCGGGGGAGCCCCGGTAG

Upstream 100 bases:

>100_bases
CCGCCATGCCCTACCTTCTGGTTATCCTGGTCCTGGCGCTCTCGGGCCGGTCCCGGGCCCCCAAGGCCCTGGGCCAGCCC
TTTGAGCGGGGGAGGTAGCC

Downstream 100 bases:

>100_bases
GCCCGCTAAGGGCGGGGAAGGCGCGGGGAAAGGGGTATAATGCCCGCCATGGAAGTGGGCACGCTCGCGCCGGACTTCGC
CCTGCCTGACCAGGAGGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MQRLVLGVLAALGLALGQGEKLKACFIYVGPVGDAGWTYAHDVGRKKAEAALPWLETRYVESVPEAQVVPVIDRFVREGC
RVIFATSFGYMDGVLEAAKKYPDVIFAHATGIKRAPNVATYMADFYQVYYLNGLAAGALTKTGKVGYVAAFPIPEVKRHI
NAFALGVRAVRPDAQVLVRWINAWYDPAKAREATEALLAQGADVFAFTEDTPTVIQTAARKGAYSFGHYTPMLKFAPDHV
VSGQIVHWDVIYIDFLKKVKEGVYTPKNLENVDYFWLLQHGAVEMGADYGVPINPKHVPLLKAAQMSVEGKKVPVYDRIM
SLLGAMKRPNPTFDPFTGPIKDRKGVVRIPAGRKATLNELLTMEWAAPGVVGDWPGEPR

Sequences:

>Translated_379_residues
MQRLVLGVLAALGLALGQGEKLKACFIYVGPVGDAGWTYAHDVGRKKAEAALPWLETRYVESVPEAQVVPVIDRFVREGC
RVIFATSFGYMDGVLEAAKKYPDVIFAHATGIKRAPNVATYMADFYQVYYLNGLAAGALTKTGKVGYVAAFPIPEVKRHI
NAFALGVRAVRPDAQVLVRWINAWYDPAKAREATEALLAQGADVFAFTEDTPTVIQTAARKGAYSFGHYTPMLKFAPDHV
VSGQIVHWDVIYIDFLKKVKEGVYTPKNLENVDYFWLLQHGAVEMGADYGVPINPKHVPLLKAAQMSVEGKKVPVYDRIM
SLLGAMKRPNPTFDPFTGPIKDRKGVVRIPAGRKATLNELLTMEWAAPGVVGDWPGEPR
>Mature_379_residues
MQRLVLGVLAALGLALGQGEKLKACFIYVGPVGDAGWTYAHDVGRKKAEAALPWLETRYVESVPEAQVVPVIDRFVREGC
RVIFATSFGYMDGVLEAAKKYPDVIFAHATGIKRAPNVATYMADFYQVYYLNGLAAGALTKTGKVGYVAAFPIPEVKRHI
NAFALGVRAVRPDAQVLVRWINAWYDPAKAREATEALLAQGADVFAFTEDTPTVIQTAARKGAYSFGHYTPMLKFAPDHV
VSGQIVHWDVIYIDFLKKVKEGVYTPKNLENVDYFWLLQHGAVEMGADYGVPINPKHVPLLKAAQMSVEGKKVPVYDRIM
SLLGAMKRPNPTFDPFTGPIKDRKGVVRIPAGRKATLNELLTMEWAAPGVVGDWPGEPR

Specific function: Positive activator of the comK gene [H]

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 41693; Mature: 41693

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRLVLGVLAALGLALGQGEKLKACFIYVGPVGDAGWTYAHDVGRKKAEAALPWLETRYV
CHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHH
ESVPEAQVVPVIDRFVREGCRVIFATSFGYMDGVLEAAKKYPDVIFAHATGIKRAPNVAT
HCCCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHH
YMADFYQVYYLNGLAAGALTKTGKVGYVAAFPIPEVKRHINAFALGVRAVRPDAQVLVRW
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHEECCHHHHHHHH
INAWYDPAKAREATEALLAQGADVFAFTEDTPTVIQTAARKGAYSFGHYTPMLKFAPDHV
HHHHCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCEECCCCC
VSGQIVHWDVIYIDFLKKVKEGVYTPKNLENVDYFWLLQHGAVEMGADYGVPINPKHVPL
CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEECCCCCCCCCCCCCCH
LKAAQMSVEGKKVPVYDRIMSLLGAMKRPNPTFDPFTGPIKDRKGVVRIPAGRKATLNEL
HHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHH
LTMEWAAPGVVGDWPGEPR
HHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MQRLVLGVLAALGLALGQGEKLKACFIYVGPVGDAGWTYAHDVGRKKAEAALPWLETRYV
CHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHH
ESVPEAQVVPVIDRFVREGCRVIFATSFGYMDGVLEAAKKYPDVIFAHATGIKRAPNVAT
HCCCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHH
YMADFYQVYYLNGLAAGALTKTGKVGYVAAFPIPEVKRHINAFALGVRAVRPDAQVLVRW
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHEECCHHHHHHHH
INAWYDPAKAREATEALLAQGADVFAFTEDTPTVIQTAARKGAYSFGHYTPMLKFAPDHV
HHHHCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCEECCCCC
VSGQIVHWDVIYIDFLKKVKEGVYTPKNLENVDYFWLLQHGAVEMGADYGVPINPKHVPL
CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEECCCCCCCCCCCCCCH
LKAAQMSVEGKKVPVYDRIMSLLGAMKRPNPTFDPFTGPIKDRKGVVRIPAGRKATLNEL
HHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHH
LTMEWAAPGVVGDWPGEPR
HHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9335269; 9384377 [H]