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The map label for this gene is ygaF [H]

Identifier: 55981269

GI number: 55981269

Start: 1240439

End: 1240915

Strand: Reverse

Name: ygaF [H]

Synonym: TTHA1300

Alternate gene names: 55981269

Gene position: 1240915-1240439 (Counterclockwise)

Preceding gene: 55981270

Following gene: 55981268

Centisome position: 67.09

GC content: 68.97

Gene sequence:

>477_bases
ATGCCCGCCATGGAAGTGGGCACGCTCGCGCCGGACTTCGCCCTGCCTGACCAGGAGGGCCGCACCCACCGCCTCTCCGA
CTACCGGGGGCGGTGGGTGGTCCTTTACTTCTACCCCAAGGACGACACCCCCGGGTGCACCAAGGAGGCCTGCGGCTTCC
GGGACCAGATGGGAAGCCTCAAGGCCCTGGACGCGGTGGTCCTCGGGGTCTCGGCGGACGACGTGGAAAGCCACAAGCGC
TTCGCCGAGAAGTACGGCCTGAACTTTCCCCTCCTCGCCGACCCCGAGCGGAAGGTCATCGGGGCCTACGGGGCCTGGGG
GAAGAAGAACCTTTACGGCAAGGAGGTGGAGGGGGTGCTCCGCCAGACCTTCCTCATAGACCCCGAGGGCCGCATCGCCA
AGGTCTGGCGCAAGGTCTCCCCCGAGGGGCACGCCCTCGAGGTGGCCGAGGCCCTGAAGGCGCTCAGGGGGGCCTGA

Upstream 100 bases:

>100_bases
CCTCACCATGGAGTGGGCCGCCCCCGGCGTGGTGGGCGACTGGCCGGGGGAGCCCCGGTAGGCCCGCTAAGGGCGGGGAA
GGCGCGGGGAAAGGGGTATA

Downstream 100 bases:

>100_bases
TGGAGCGCCCCCTGGAGAGCTACAAGAAGGAGGCGGCCCACGCCGCCATCGCCTACGTCCAGGACGGGATGGTGGTGGGC
CTGGGCACGGGCTCCACGGC

Product: bacterioferritin comigratory protein, thiol peroxidase

Products: NA

Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MPAMEVGTLAPDFALPDQEGRTHRLSDYRGRWVVLYFYPKDDTPGCTKEACGFRDQMGSLKALDAVVLGVSADDVESHKR
FAEKYGLNFPLLADPERKVIGAYGAWGKKNLYGKEVEGVLRQTFLIDPEGRIAKVWRKVSPEGHALEVAEALKALRGA

Sequences:

>Translated_158_residues
MPAMEVGTLAPDFALPDQEGRTHRLSDYRGRWVVLYFYPKDDTPGCTKEACGFRDQMGSLKALDAVVLGVSADDVESHKR
FAEKYGLNFPLLADPERKVIGAYGAWGKKNLYGKEVEGVLRQTFLIDPEGRIAKVWRKVSPEGHALEVAEALKALRGA
>Mature_157_residues
PAMEVGTLAPDFALPDQEGRTHRLSDYRGRWVVLYFYPKDDTPGCTKEACGFRDQMGSLKALDAVVLGVSADDVESHKRF
AEKYGLNFPLLADPERKVIGAYGAWGKKNLYGKEVEGVLRQTFLIDPEGRIAKVWRKVSPEGHALEVAEALKALRGA

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI4505591, Length=155, Percent_Identity=31.6129032258064, Blast_Score=74, Evalue=5e-14,
Organism=Homo sapiens, GI32455266, Length=155, Percent_Identity=31.6129032258064, Blast_Score=74, Evalue=5e-14,
Organism=Homo sapiens, GI32455264, Length=155, Percent_Identity=31.6129032258064, Blast_Score=74, Evalue=5e-14,
Organism=Homo sapiens, GI32189392, Length=162, Percent_Identity=34.5679012345679, Blast_Score=72, Evalue=3e-13,
Organism=Escherichia coli, GI1788825, Length=153, Percent_Identity=45.0980392156863, Blast_Score=141, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI32565831, Length=168, Percent_Identity=33.9285714285714, Blast_Score=79, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI193204376, Length=168, Percent_Identity=33.9285714285714, Blast_Score=79, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17554494, Length=151, Percent_Identity=29.8013245033113, Blast_Score=64, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322180, Length=159, Percent_Identity=38.3647798742138, Blast_Score=95, Evalue=5e-21,
Organism=Saccharomyces cerevisiae, GI6319407, Length=167, Percent_Identity=30.5389221556886, Blast_Score=67, Evalue=1e-12,
Organism=Drosophila melanogaster, GI17738015, Length=168, Percent_Identity=33.9285714285714, Blast_Score=78, Evalue=3e-15,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 17509; Mature: 17378

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAMEVGTLAPDFALPDQEGRTHRLSDYRGRWVVLYFYPKDDTPGCTKEACGFRDQMGSL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHCCCHHHHCCH
KALDAVVLGVSADDVESHKRFAEKYGLNFPLLADPERKVIGAYGAWGKKNLYGKEVEGVL
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHH
RQTFLIDPEGRIAKVWRKVSPEGHALEVAEALKALRGA
HHHEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
PAMEVGTLAPDFALPDQEGRTHRLSDYRGRWVVLYFYPKDDTPGCTKEACGFRDQMGSL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHCCCHHHHCCH
KALDAVVLGVSADDVESHKRFAEKYGLNFPLLADPERKVIGAYGAWGKKNLYGKEVEGVL
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHH
RQTFLIDPEGRIAKVWRKVSPEGHALEVAEALKALRGA
HHHEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]