| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981224
Identifier: 55981224
GI number: 55981224
Start: 1194080
End: 1194289
Strand: Direct
Name: 55981224
Synonym: TTHA1255
Alternate gene names: NA
Gene position: 1194080-1194289 (Clockwise)
Preceding gene: 55981223
Following gene: 55981226
Centisome position: 64.55
GC content: 68.57
Gene sequence:
>210_bases ATGAACCGCGTGCTCATCGGTATCCGGGGGGAGCCCACCCCCGAGGGGATGGAGCGGATCCTAAAGGCCCTGAAGCGCCT GGAGGGGGTGGCCGAGGTCCAGGCCACGGGGCCCGCCCAGGTCCTCGTGGCCTACGACCCCCAAAGCCTCACCGTCATGG ACCTGATCCGCACCATCCGGGAAGAGGGCTTCCTGGCGGGGATGCTCTAG
Upstream 100 bases:
>100_bases GCGGAGGGCTTCGCCCTCGGCCCCCTGGTCCTCGCGGTCCGGGTCCTGGGAAGCCGGGGAGCGCGGGGCGAGACCCGGGG CGTCCTAGAATAGGAGGGGT
Downstream 100 bases:
>100_bases GGGGCGAGCTTCACGGCGGTGCCGCTCGCCGTCACCATGAGCATGGAGTTCCCCGAACCCAGGACCTCGTAGTCCAGGTC CACGCCCACCACCGCGTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MNRVLIGIRGEPTPEGMERILKALKRLEGVAEVQATGPAQVLVAYDPQSLTVMDLIRTIREEGFLAGML
Sequences:
>Translated_69_residues MNRVLIGIRGEPTPEGMERILKALKRLEGVAEVQATGPAQVLVAYDPQSLTVMDLIRTIREEGFLAGML >Mature_69_residues MNRVLIGIRGEPTPEGMERILKALKRLEGVAEVQATGPAQVLVAYDPQSLTVMDLIRTIREEGFLAGML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7564; Mature: 7564
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS50846 HMA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRVLIGIRGEPTPEGMERILKALKRLEGVAEVQATGPAQVLVAYDPQSLTVMDLIRTIR CCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHH EEGFLAGML HCCCEECCC >Mature Secondary Structure MNRVLIGIRGEPTPEGMERILKALKRLEGVAEVQATGPAQVLVAYDPQSLTVMDLIRTIR CCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHH EEGFLAGML HCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA