Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

Click here to switch to the map view.

The map label for this gene is 55981216

Identifier: 55981216

GI number: 55981216

Start: 1181222

End: 1181608

Strand: Direct

Name: 55981216

Synonym: TTHA1247

Alternate gene names: NA

Gene position: 1181222-1181608 (Clockwise)

Preceding gene: 55981215

Following gene: 55981218

Centisome position: 63.86

GC content: 66.41

Gene sequence:

>387_bases
ATGGAAGGCGAAGCCGAGCTCTGGAACTTTTTGGAGAGGCACCTGAGGAGCATCTACGAGGGCGACTGGGCCACGTACGA
GGCCACCACCCACGAGGAGCTTTCCCTCTACGAGTGGTTCGTGACCCCCCACCGCCTGGACGGCCTCCCCTTCCACCGCT
TCATGGTGGAGAAGAACTGGGCCACGAGGGGCAGGGCCTACCGCCTGGACCTCCTGGAAAAGCGCCTTCAGCGCTATGGG
GACGTGGCCATCTTCAGCTACACCCTCCTCCTCACCGTGGAGGAGGAGGCGGGCCTCCGCCACCGGGCGGTGAACGAGAG
CCGGGTGGCGGTGCGCTTCCCCGAGGGGTGGAAGGTGGTGCACGTGCACAAGAGCCCGGCGGGGTGA

Upstream 100 bases:

>100_bases
ACGTGCTGGAGGCCTTCCGGCGCCGGGCCACCCTGGGGGAGGTCTGCGGGGTTCTTAGGGAGGAGTGGGGCGAGTACCAG
CCCCCCCGGTGAGGAGGGCC

Downstream 100 bases:

>100_bases
AGGCCACCCCGCCGGGGCGCGGCGCCCGTGGGGCTTAGGCGCCCTCCTTCAGCCGCTCCACCACGGAGCGGTCCTCGAGG
GTGGAGGTGTCCCCCTTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MEGEAELWNFLERHLRSIYEGDWATYEATTHEELSLYEWFVTPHRLDGLPFHRFMVEKNWATRGRAYRLDLLEKRLQRYG
DVAIFSYTLLLTVEEEAGLRHRAVNESRVAVRFPEGWKVVHVHKSPAG

Sequences:

>Translated_128_residues
MEGEAELWNFLERHLRSIYEGDWATYEATTHEELSLYEWFVTPHRLDGLPFHRFMVEKNWATRGRAYRLDLLEKRLQRYG
DVAIFSYTLLLTVEEEAGLRHRAVNESRVAVRFPEGWKVVHVHKSPAG
>Mature_128_residues
MEGEAELWNFLERHLRSIYEGDWATYEATTHEELSLYEWFVTPHRLDGLPFHRFMVEKNWATRGRAYRLDLLEKRLQRYG
DVAIFSYTLLLTVEEEAGLRHRAVNESRVAVRFPEGWKVVHVHKSPAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15187; Mature: 15187

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGEAELWNFLERHLRSIYEGDWATYEATTHEELSLYEWFVTPHRLDGLPFHRFMVEKNW
CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCCCCCCCCHHHHEEECCC
ATRGRAYRLDLLEKRLQRYGDVAIFSYTLLLTVEEEAGLRHRAVNESRVAVRFPEGWKVV
CCCCCEEEHHHHHHHHHHHCCEEEEEEEEEEEECCCCCCHHHCCCCCEEEEECCCCCEEE
HVHKSPAG
EEECCCCC
>Mature Secondary Structure
MEGEAELWNFLERHLRSIYEGDWATYEATTHEELSLYEWFVTPHRLDGLPFHRFMVEKNW
CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCCCCCCCCHHHHEEECCC
ATRGRAYRLDLLEKRLQRYGDVAIFSYTLLLTVEEEAGLRHRAVNESRVAVRFPEGWKVV
CCCCCEEEHHHHHHHHHHHCCEEEEEEEEEEEECCCCCCHHHCCCCCEEEEECCCCCEEE
HVHKSPAG
EEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA