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The map label for this gene is 55981193

Identifier: 55981193

GI number: 55981193

Start: 1163147

End: 1163848

Strand: Direct

Name: 55981193

Synonym: TTHA1224

Alternate gene names: NA

Gene position: 1163147-1163848 (Clockwise)

Preceding gene: 55981192

Following gene: 55981197

Centisome position: 62.88

GC content: 66.52

Gene sequence:

>702_bases
ATGGGCGCGGCCAAACAGGTGCGGCCCCTGACCTTGGAAGAGTACCTCGCCTTGGAGCGGGAAGCCCCGGTGAAGCACGA
GCTGGTGGAAGGCTTCCCCCACGCCATGGCCGGGACGGGCGACCGGCACAACCGGGTGGTGGTGAACCTGGTCCTGGCCC
TTGGCCCCCTGGCCCGGAAGCGGGGCTGCCGCCTCTATGCCAGCGACATGCGGCTCAAGGTGGACGCGGCCACGGTCTAC
TACCCGGACCTCATGTTGCGAAGAAGACCTCGGGGAATACTACAAGGAAAAGGCTTGCCTGGTGATAGAGGTGCTCTCGC
ACTCCACGGAGGCCACGGACCGGAGGGAAAAGCTCTGCAAGTACCTGGGTCTGCCCACCCTCCAAGCCTACCTCCTCCTG
GACTCCCGCACCCCCCGGGCCTTCGGCTACTACCGAGAAGGAGAGGGCTGGGTGTACCGGGAGGCAGAGGTAGGCACGCT
TCCCCTCCCCTGCCTAGGGGGGCACCTGGACCTCGCCGAGGTGTACCAGGGCCTCTAGAAGGCTACCCCCTCGTAGAGGG
CAGAAACGGAAAAGCGAGCCTCGAGGCAAGCCACCTCCACCTCCCCTTCCCCCTCCCACAGGCGGTAGAGCCAGCCCTCC
CCCTGGCGGAAGTAGCCCTCCACCCGCCTCTCCCGGGAGTCCACCAGGAGGTAAGCCTGTAG

Upstream 100 bases:

>100_bases
GGCCGTCCTCACCTTTCTCCGCTAAGCCCTCGGGCGGCGCGGGGGTGGCCGTCCCGCCATGAGGCGGCGTAGGCTTTCCG
GCCTGCCCTACACTCTAGCC

Downstream 100 bases:

>100_bases
GCTCGGGATCTCCCGGTAGCGCCAGAGCTTCTCCCTTCGGTCTATGGCCTCGGTGGCCTCGGACACCACCTCCACCACCA
GGCAGGGGGCCTCCTCGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MGAAKQVRPLTLEEYLALEREAPVKHELVEGFPHAMAGTGDRHNRVVVNLVLALGPLARKRGCRLYASDMRLKVDAATVY
YPDLMLRRRPRGILQGKGLPGDRGALALHGGHGPEGKALQVPGSAHPPSLPPPGLPHPPGLRLLPRRRGLGVPGGRGRHA
SPPLPRGAPGPRRGVPGPLEGYPLVEGRNGKASLEASHLHLPFPLPQAVEPALPLAEVALHPPLPGVHQEVSL

Sequences:

>Translated_233_residues
MGAAKQVRPLTLEEYLALEREAPVKHELVEGFPHAMAGTGDRHNRVVVNLVLALGPLARKRGCRLYASDMRLKVDAATVY
YPDLMLRRRPRGILQGKGLPGDRGALALHGGHGPEGKALQVPGSAHPPSLPPPGLPHPPGLRLLPRRRGLGVPGGRGRHA
SPPLPRGAPGPRRGVPGPLEGYPLVEGRNGKASLEASHLHLPFPLPQAVEPALPLAEVALHPPLPGVHQEVSL
>Mature_232_residues
GAAKQVRPLTLEEYLALEREAPVKHELVEGFPHAMAGTGDRHNRVVVNLVLALGPLARKRGCRLYASDMRLKVDAATVYY
PDLMLRRRPRGILQGKGLPGDRGALALHGGHGPEGKALQVPGSAHPPSLPPPGLPHPPGLRLLPRRRGLGVPGGRGRHAS
PPLPRGAPGPRRGVPGPLEGYPLVEGRNGKASLEASHLHLPFPLPQAVEPALPLAEVALHPPLPGVHQEVSL

Specific function: Unknown

COG id: COG4636

COG function: function code S; Uncharacterized protein conserved in cyanobacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To Synechocystis PCC 6803 sll1609 and sll0925 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008538
- InterPro:   IPR012296
- InterPro:   IPR011335 [H]

Pfam domain/function: PF05685 DUF820 [H]

EC number: NA

Molecular weight: Translated: 24716; Mature: 24585

Theoretical pI: Translated: 11.09; Mature: 11.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAAKQVRPLTLEEYLALEREAPVKHELVEGFPHAMAGTGDRHNRVVVNLVLALGPLARK
CCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCHHHCCCCCCCCEEHHHHHHHHHHHHHH
RGCRLYASDMRLKVDAATVYYPDLMLRRRPRGILQGKGLPGDRGALALHGGHGPEGKALQ
CCCEEEECCEEEEEEEEEEECCHHHHHHCCCCCEECCCCCCCCCEEEEECCCCCCCCEEE
VPGSAHPPSLPPPGLPHPPGLRLLPRRRGLGVPGGRGRHASPPLPRGAPGPRRGVPGPLE
CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GYPLVEGRNGKASLEASHLHLPFPLPQAVEPALPLAEVALHPPLPGVHQEVSL
CCCEEECCCCCCEEEECEEECCCCCCHHHCCCCCHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
GAAKQVRPLTLEEYLALEREAPVKHELVEGFPHAMAGTGDRHNRVVVNLVLALGPLARK
CCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCHHHCCCCCCCCEEHHHHHHHHHHHHHH
RGCRLYASDMRLKVDAATVYYPDLMLRRRPRGILQGKGLPGDRGALALHGGHGPEGKALQ
CCCEEEECCEEEEEEEEEEECCHHHHHHCCCCCEECCCCCCCCCEEEEECCCCCCCCEEE
VPGSAHPPSLPPPGLPHPPGLRLLPRRRGLGVPGGRGRHASPPLPRGAPGPRRGVPGPLE
CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GYPLVEGRNGKASLEASHLHLPFPLPQAVEPALPLAEVALHPPLPGVHQEVSL
CCCEEECCCCCCEEEECEEECCCCCCHHHCCCCCHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]