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The map label for this gene is ylbK [H]

Identifier: 55981130

GI number: 55981130

Start: 1106082

End: 1106909

Strand: Reverse

Name: ylbK [H]

Synonym: TTHA1161

Alternate gene names: 55981130

Gene position: 1106909-1106082 (Counterclockwise)

Preceding gene: 55981131

Following gene: 55981125

Centisome position: 59.84

GC content: 72.46

Gene sequence:

>828_bases
GTGCGCGGCGTGGCCTTGGCCTTAGGGGGAGGCGGCGTCCGGGGGTACGCCCACCTCGGGGTGCTCGCCGTCTTGGAGGA
GGCGGGCGTTCCCATCCGGGGCCTTGCGGGGAGCTCCGCCGGGGCTCTGGCGGCGGCCGCCTGGGCCTTCGGCCACAAGG
ACCCCTGGAGGGTGCACGAGGCCATCTTTGACCGGGAGGTGGCGGAGCTTTCCCGGGCGGGAAGCCTCCGGGCCTTGGCC
CGGCTCTTCATCGCCTTCAGGCGCCCGGCCGTGGTGGACACGGACCGGATAGAGGAGGGGCTTAAGGCCCTCTTTGGCGA
GGCGCGGCTGGAGGAGAGCCCCATCCCCCTCGCCCTCCAGGCGGCCGACCTCCTCACGGGCGAGGCGGTGGTCCTGAGGG
AAGGGCCGGTGTGGAAGGCGGTCCTCGCCAGCATGGCCATCCCGGGCCTCTTCCCCCCGGTGGCCCTCATGGGGCGGCTC
CTCGTGGACGGGGACGTGGCGGAGAAGGTGCCGGTGCGGGCGGCCAAGGCCCTCTTCCCCAAGGTGGTGGCCGTGGACGT
CTCCAACCCTCCGCCCAAGGAACCGCCCAGGACGGCCCTCGAGGCCGCCCTCCTGGCGGGCGAGGCGAGCCGGAGGCGGC
TCAAAGCCCTGGCCCTCAAGGAGGCGGACGTGGTCATCGCCCTGGACCCCCCCTTCCCCATAGACACCTTTGACCACGAG
CGGCTGGAGTTCGTCTACGAGCTGGGAAAGCACCGGGCCAAGGAGCGCCTTCCCGAGGTCTTGGCCCTGGCGAGGACCCG
GCTTAGGGACCTCTTGCCCCGGCGTTGA

Upstream 100 bases:

>100_bases
GGACCTTCTGGCTTACCTGGAGGCTTCCCGGAAGCGGGGCAGGGAGCTTTTGGACGAGCTCATCGGCGAGGCCCAGGAGC
TCGGCCTGGGGTATTAGGCC

Downstream 100 bases:

>100_bases
GCCCCTCTTCCCCCCGGCGGAGGAAGCCCCAGAAGGCGCCGAGGCCCAAGGGGAGAAGGAGGAGGCCCAGGGGCCTCAGG
AGGAGGCCCAAAACCCCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MRGVALALGGGGVRGYAHLGVLAVLEEAGVPIRGLAGSSAGALAAAAWAFGHKDPWRVHEAIFDREVAELSRAGSLRALA
RLFIAFRRPAVVDTDRIEEGLKALFGEARLEESPIPLALQAADLLTGEAVVLREGPVWKAVLASMAIPGLFPPVALMGRL
LVDGDVAEKVPVRAAKALFPKVVAVDVSNPPPKEPPRTALEAALLAGEASRRRLKALALKEADVVIALDPPFPIDTFDHE
RLEFVYELGKHRAKERLPEVLALARTRLRDLLPRR

Sequences:

>Translated_275_residues
MRGVALALGGGGVRGYAHLGVLAVLEEAGVPIRGLAGSSAGALAAAAWAFGHKDPWRVHEAIFDREVAELSRAGSLRALA
RLFIAFRRPAVVDTDRIEEGLKALFGEARLEESPIPLALQAADLLTGEAVVLREGPVWKAVLASMAIPGLFPPVALMGRL
LVDGDVAEKVPVRAAKALFPKVVAVDVSNPPPKEPPRTALEAALLAGEASRRRLKALALKEADVVIALDPPFPIDTFDHE
RLEFVYELGKHRAKERLPEVLALARTRLRDLLPRR
>Mature_275_residues
MRGVALALGGGGVRGYAHLGVLAVLEEAGVPIRGLAGSSAGALAAAAWAFGHKDPWRVHEAIFDREVAELSRAGSLRALA
RLFIAFRRPAVVDTDRIEEGLKALFGEARLEESPIPLALQAADLLTGEAVVLREGPVWKAVLASMAIPGLFPPVALMGRL
LVDGDVAEKVPVRAAKALFPKVVAVDVSNPPPKEPPRTALEAALLAGEASRRRLKALALKEADVVIALDPPFPIDTFDHE
RLEFVYELGKHRAKERLPEVLALARTRLRDLLPRR

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656039, Length=189, Percent_Identity=30.6878306878307, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI260656041, Length=189, Percent_Identity=30.6878306878307, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI260656037, Length=189, Percent_Identity=30.6878306878307, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI116256487, Length=189, Percent_Identity=30.6878306878307, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI260656043, Length=189, Percent_Identity=30.6878306878307, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI148727335, Length=192, Percent_Identity=28.125, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI148727290, Length=192, Percent_Identity=28.125, Blast_Score=76, Evalue=3e-14,
Organism=Escherichia coli, GI226510936, Length=187, Percent_Identity=31.5508021390374, Blast_Score=86, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6323581, Length=197, Percent_Identity=29.4416243654822, Blast_Score=86, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 29507; Mature: 29507

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGVALALGGGGVRGYAHLGVLAVLEEAGVPIRGLAGSSAGALAAAAWAFGHKDPWRVHE
CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCCHHHHHH
AIFDREVAELSRAGSLRALARLFIAFRRPAVVDTDRIEEGLKALFGEARLEESPIPLALQ
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEH
AADLLTGEAVVLREGPVWKAVLASMAIPGLFPPVALMGRLLVDGDVAEKVPVRAAKALFP
HHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCC
KVVAVDVSNPPPKEPPRTALEAALLAGEASRRRLKALALKEADVVIALDPPFPIDTFDHE
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHH
RLEFVYELGKHRAKERLPEVLALARTRLRDLLPRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRGVALALGGGGVRGYAHLGVLAVLEEAGVPIRGLAGSSAGALAAAAWAFGHKDPWRVHE
CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCCHHHHHH
AIFDREVAELSRAGSLRALARLFIAFRRPAVVDTDRIEEGLKALFGEARLEESPIPLALQ
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEH
AADLLTGEAVVLREGPVWKAVLASMAIPGLFPPVALMGRLLVDGDVAEKVPVRAAKALFP
HHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCC
KVVAVDVSNPPPKEPPRTALEAALLAGEASRRRLKALALKEADVVIALDPPFPIDTFDHE
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHH
RLEFVYELGKHRAKERLPEVLALARTRLRDLLPRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]