| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
Click here to switch to the map view.
The map label for this gene is 55981120
Identifier: 55981120
GI number: 55981120
Start: 1097090
End: 1097569
Strand: Reverse
Name: 55981120
Synonym: TTHA1151
Alternate gene names: NA
Gene position: 1097569-1097090 (Counterclockwise)
Preceding gene: 55981122
Following gene: 55981119
Centisome position: 59.34
GC content: 68.12
Gene sequence:
>480_bases ATGGGGGCGGTGGCGATGACCTCCTGCCCCTTCTCCAGGTTGAGCCCCACGCGGATGGCGAGTTCGGCGAGCTTTTCCAG GTTGCGCTTGAAGGCGTCCACGCCCCAAGTCTTCGCCCGGAAGGGCCTTCCGTCAAGGCCTGGGGCAGCTTCGGGGCCGG GCGAGGAGGAGGGCGAGGCCCGCGAGGAGAAGGAGGAAGGGGCGGTAGGCCTCGAGGGCCAGGGCCAGGACCACGAGGAG GAGGACGAGGAGGTAGCGCGCCATGCCTTCATCCTAAGGCAGGTCGGCCTCCTCCCTCAGGGCGTAGAACCCCTTCCCCA GGGCCACCACCGGGCTCCGGTGCCAGCGGGCCAGGGCGGAAAGGCGGATCTTGGCGATCTTCTCCGGTTCCTTCACGTCC TTCCAGAGCCCGTCCTCCTTGAGGAGGCGGCCGATCTCCGTGTAGTGGAGGGGCCTTCCCGCCTCTTTGAGGAGCGCTAA
Upstream 100 bases:
>100_bases CTTGCGGGCAAGCTCCTGGTCCCCGTAGATCACGGTGAAGAGGCTCGCCCCCTCCCGGTAGGCCTTCTCCGCGAGGAGGC GCACGAAGTCCACGGCCTCA
Downstream 100 bases:
>100_bases CACCTTTTTGCGAAACCGGTCCGGCCTCGGCATAGGGGCTTCGTCCAGTCTACCCGTATAGTGGGGGTATGCGGAACCAG GAGCTCGCCCGGATCTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MGAVAMTSCPFSRLSPTRMASSASFSRLRLKASTPQVFARKGLPSRPGAASGPGEEEGEAREEKEEGAVGLEGQGQDHEE EDEEVARHAFILRQVGLLPQGVEPLPQGHHRAPVPAGQGGKADLGDLLRFLHVLPEPVLLEEAADLRVVEGPSRLFEER
Sequences:
>Translated_159_residues MGAVAMTSCPFSRLSPTRMASSASFSRLRLKASTPQVFARKGLPSRPGAASGPGEEEGEAREEKEEGAVGLEGQGQDHEE EDEEVARHAFILRQVGLLPQGVEPLPQGHHRAPVPAGQGGKADLGDLLRFLHVLPEPVLLEEAADLRVVEGPSRLFEER >Mature_158_residues GAVAMTSCPFSRLSPTRMASSASFSRLRLKASTPQVFARKGLPSRPGAASGPGEEEGEAREEKEEGAVGLEGQGQDHEEE DEEVARHAFILRQVGLLPQGVEPLPQGHHRAPVPAGQGGKADLGDLLRFLHVLPEPVLLEEAADLRVVEGPSRLFEER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17063; Mature: 16932
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAVAMTSCPFSRLSPTRMASSASFSRLRLKASTPQVFARKGLPSRPGAASGPGEEEGEA CCCCCCCCCCCHHCCHHHHHHCCCHHHEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCHH REEKEEGAVGLEGQGQDHEEEDEEVARHAFILRQVGLLPQGVEPLPQGHHRAPVPAGQGG HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC KADLGDLLRFLHVLPEPVLLEEAADLRVVEGPSRLFEER CCCHHHHHHHHHHCCCCHHHHCCCCEEEECCHHHHHCCC >Mature Secondary Structure GAVAMTSCPFSRLSPTRMASSASFSRLRLKASTPQVFARKGLPSRPGAASGPGEEEGEA CCCCCCCCCCHHCCHHHHHHCCCHHHEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCHH REEKEEGAVGLEGQGQDHEEEDEEVARHAFILRQVGLLPQGVEPLPQGHHRAPVPAGQGG HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC KADLGDLLRFLHVLPEPVLLEEAADLRVVEGPSRLFEER CCCHHHHHHHHHHCCCCHHHHCCCCEEEECCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA