| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
Click here to switch to the map view.
The map label for this gene is merA [H]
Identifier: 55981122
GI number: 55981122
Start: 1098696
End: 1100069
Strand: Reverse
Name: merA [H]
Synonym: TTHA1153
Alternate gene names: 55981122
Gene position: 1100069-1098696 (Counterclockwise)
Preceding gene: 55981123
Following gene: 55981120
Centisome position: 59.47
GC content: 73.29
Gene sequence:
>1374_bases ATGACCTACGACCTCCTCATCGTGGGCTCGGGCTCCGCCGGGGTGGCGGCGGCCCTGGAGGCGAGCGCCCTCGGGGCCAA GGCGGCCGTGGTGGAGGCGGGGGTTTTGGGGGGGACCTGCGTCAACGTGGGGTGCGTGCCCTCCAAGTACCTCCTCCGGG CGGCCGACGCCTTCCACCGGGCGGGCCACCCCGCCTTCCCCGGCCTCCGCACGGAGGCCCTGGGGGTGGACTGGAAAGCC CTCCTCGCGGGCAAGGAGGGCCTGATCGCGGCCCTCAGGAAGGAGAAGTACCAGGAGGTTCTGGAGGCGGCCGGGGTTCC CGTGCTCCGGGGGAGGGCCCGCTTCCTGGACGGGGAAAGGATGGAGGTAGAGGGGCGGGAGGTCTTGGCCGGGCGGTACC TCCTCGCCACCGGGGCGAGGCCCTTCCTTCCGCCCATCCCCGGCCTCCAGGAGAGCGCGCCCTGGACCTACCTCGAGGCC CTCTCCGCCCCCGCCCTTCCCGAAAGCCTCCTGGTGGTGGGGGGTGGGCCCATCGGGCTTGAGCTCGCCCAGGCCTTCGC CAGGCTTGGGAGCCGGGTGACGGTCCTCGAGGCCCTGCCCGAGGTCCTGCCCCAGGAGGACCGGGAGCTTGCCCGGCTCC TCCGGGGCTACCTGGAGGAGGAGGGCCTTAGGGTCCACACCGGGGTCCGGGTGGAGGCCGTGGCCCGGGAAGGGGCCTTC CGCGTCCGGACCGACCGGGGGGTTTTTGAGGCGGAGAGGCTCCTTGTGGCCACGGGGAGGAGGCCGGACCTGGAAGGGCT CGGCCTGGAGCGGGCGGGCGTGGAGCGGGACGAGCGGGGCTTCCTCCGGCTGGACCCCAGCCTGCGCACCACCAACCCCC GGGTCTACGCCGCCGGGGACGCGGCGGGGCTTCCCCAGTTCGTCTACGTGGCCGCCCAGTCGGGCAGGGTGGCGGCCCGC AACGCCTTGGGGGTAAAGGCGCCCCTGGACCTCGCCGCCCTCCCCCGGGTCACCTTCACCGACCCCGCCCTGGCCGCGGT GGGCCTCACGGAGGAGGAGGCGAGGAGGCGGTACGGCGCGGGGGTGCGGGCGGCCACCCTTCCCCTTTCCCAGGTGCCCA AGGCCCTCACCGCCCGCGACACCCGGGGGGCCTTCAAGATCGTGGTGGACGAAGAGGGCACGGTCCTCGGCCTCCACGTC CTGGCCCACGAGGCGGGGGACGTCATCCAGGAGGGCATCCTGGCGGTGAAGTACGGCTTCGGCTACCGGGACCTCATAGA CACCTTCCACCCCTACCTGACCCTGGCCGAGGGGATAAGGCTCGTGGCCCAGGCCCTGGACGCCGATCCCAAAAAGCTTT CCTGCTGCGCCTGA
Upstream 100 bases:
>100_bases GCATCAAGGTGCCCGGGATCCACGGCGCGGGGTGCATCCGCAGGGTGGAGCGGGTGGCCGGGGTGGAGAAGGCGTGGATG GGCTACCCGGGGGAGGCCCT
Downstream 100 bases:
>100_bases CTACACCACCCACCTTCCCCGGCGCATGAGGGGAGTGCGGGTGCCGTCCTCGTAAAGCCCGTCCACGTCCATCTCCTCGG AGCCGATCATCCAGTCCACG
Product: mercuric reductase
Products: NA
Alternate protein names: Hg(II) reductase [H]
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MTYDLLIVGSGSAGVAAALEASALGAKAAVVEAGVLGGTCVNVGCVPSKYLLRAADAFHRAGHPAFPGLRTEALGVDWKA LLAGKEGLIAALRKEKYQEVLEAAGVPVLRGRARFLDGERMEVEGREVLAGRYLLATGARPFLPPIPGLQESAPWTYLEA LSAPALPESLLVVGGGPIGLELAQAFARLGSRVTVLEALPEVLPQEDRELARLLRGYLEEEGLRVHTGVRVEAVAREGAF RVRTDRGVFEAERLLVATGRRPDLEGLGLERAGVERDERGFLRLDPSLRTTNPRVYAAGDAAGLPQFVYVAAQSGRVAAR NALGVKAPLDLAALPRVTFTDPALAAVGLTEEEARRRYGAGVRAATLPLSQVPKALTARDTRGAFKIVVDEEGTVLGLHV LAHEAGDVIQEGILAVKYGFGYRDLIDTFHPYLTLAEGIRLVAQALDADPKKLSCCA
Sequences:
>Translated_457_residues MTYDLLIVGSGSAGVAAALEASALGAKAAVVEAGVLGGTCVNVGCVPSKYLLRAADAFHRAGHPAFPGLRTEALGVDWKA LLAGKEGLIAALRKEKYQEVLEAAGVPVLRGRARFLDGERMEVEGREVLAGRYLLATGARPFLPPIPGLQESAPWTYLEA LSAPALPESLLVVGGGPIGLELAQAFARLGSRVTVLEALPEVLPQEDRELARLLRGYLEEEGLRVHTGVRVEAVAREGAF RVRTDRGVFEAERLLVATGRRPDLEGLGLERAGVERDERGFLRLDPSLRTTNPRVYAAGDAAGLPQFVYVAAQSGRVAAR NALGVKAPLDLAALPRVTFTDPALAAVGLTEEEARRRYGAGVRAATLPLSQVPKALTARDTRGAFKIVVDEEGTVLGLHV LAHEAGDVIQEGILAVKYGFGYRDLIDTFHPYLTLAEGIRLVAQALDADPKKLSCCA >Mature_456_residues TYDLLIVGSGSAGVAAALEASALGAKAAVVEAGVLGGTCVNVGCVPSKYLLRAADAFHRAGHPAFPGLRTEALGVDWKAL LAGKEGLIAALRKEKYQEVLEAAGVPVLRGRARFLDGERMEVEGREVLAGRYLLATGARPFLPPIPGLQESAPWTYLEAL SAPALPESLLVVGGGPIGLELAQAFARLGSRVTVLEALPEVLPQEDRELARLLRGYLEEEGLRVHTGVRVEAVAREGAFR VRTDRGVFEAERLLVATGRRPDLEGLGLERAGVERDERGFLRLDPSLRTTNPRVYAAGDAAGLPQFVYVAAQSGRVAARN ALGVKAPLDLAALPRVTFTDPALAAVGLTEEEARRRYGAGVRAATLPLSQVPKALTARDTRGAFKIVVDEEGTVLGLHVL AHEAGDVIQEGILAVKYGFGYRDLIDTFHPYLTLAEGIRLVAQALDADPKKLSCCA
Specific function: Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0) [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 HMA domains [H]
Homologues:
Organism=Homo sapiens, GI91199540, Length=461, Percent_Identity=29.9349240780911, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI50301238, Length=457, Percent_Identity=30.8533916849015, Blast_Score=177, Evalue=3e-44, Organism=Homo sapiens, GI22035672, Length=497, Percent_Identity=30.3822937625755, Blast_Score=122, Evalue=6e-28, Organism=Homo sapiens, GI291045266, Length=468, Percent_Identity=28.8461538461538, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI33519430, Length=464, Percent_Identity=29.7413793103448, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI33519428, Length=464, Percent_Identity=29.7413793103448, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI33519426, Length=464, Percent_Identity=29.7413793103448, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI148277065, Length=464, Percent_Identity=29.7413793103448, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI148277071, Length=464, Percent_Identity=29.7413793103448, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI291045268, Length=466, Percent_Identity=27.8969957081545, Blast_Score=102, Evalue=9e-22, Organism=Escherichia coli, GI1786307, Length=454, Percent_Identity=31.2775330396476, Blast_Score=211, Evalue=1e-55, Organism=Escherichia coli, GI87081717, Length=450, Percent_Identity=30.4444444444444, Blast_Score=204, Evalue=9e-54, Organism=Escherichia coli, GI1789915, Length=427, Percent_Identity=33.0210772833724, Blast_Score=195, Evalue=5e-51, Organism=Escherichia coli, GI87082354, Length=457, Percent_Identity=26.2582056892779, Blast_Score=140, Evalue=2e-34, Organism=Escherichia coli, GI1789065, Length=218, Percent_Identity=32.1100917431193, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI32565766, Length=459, Percent_Identity=30.2832244008715, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17557007, Length=491, Percent_Identity=29.1242362525458, Blast_Score=164, Evalue=8e-41, Organism=Caenorhabditis elegans, GI71983429, Length=367, Percent_Identity=32.425068119891, Blast_Score=151, Evalue=8e-37, Organism=Caenorhabditis elegans, GI71983419, Length=367, Percent_Identity=32.425068119891, Blast_Score=150, Evalue=9e-37, Organism=Caenorhabditis elegans, GI71982272, Length=457, Percent_Identity=29.7592997811816, Blast_Score=128, Evalue=5e-30, Organism=Caenorhabditis elegans, GI17559934, Length=199, Percent_Identity=27.1356783919598, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6321091, Length=490, Percent_Identity=31.4285714285714, Blast_Score=196, Evalue=6e-51, Organism=Saccharomyces cerevisiae, GI6325166, Length=459, Percent_Identity=30.0653594771242, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6325240, Length=483, Percent_Identity=26.7080745341615, Blast_Score=134, Evalue=2e-32, Organism=Drosophila melanogaster, GI21358499, Length=456, Percent_Identity=30.4824561403509, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI24640553, Length=492, Percent_Identity=31.0975609756098, Blast_Score=141, Evalue=9e-34, Organism=Drosophila melanogaster, GI24640549, Length=491, Percent_Identity=30.7535641547862, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI24640551, Length=493, Percent_Identity=30.8316430020284, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI17737741, Length=490, Percent_Identity=30.4081632653061, Blast_Score=141, Evalue=1e-33,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000815 - InterPro: IPR021179 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00403 HMA; PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.16.1.1 [H]
Molecular weight: Translated: 48477; Mature: 48346
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: PS00076 PYRIDINE_REDOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYDLLIVGSGSAGVAAALEASALGAKAAVVEAGVLGGTCVNVGCVPSKYLLRAADAFHR CCEEEEEEECCCCCHHHHHHHHHCCCHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHH AGHPAFPGLRTEALGVDWKALLAGKEGLIAALRKEKYQEVLEAAGVPVLRGRARFLDGER CCCCCCCCCCCHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEECCCHHHCCCCE MEVEGREVLAGRYLLATGARPFLPPIPGLQESAPWTYLEALSAPALPESLLVVGGGPIGL EEECCCHHHHCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCHHH ELAQAFARLGSRVTVLEALPEVLPQEDRELARLLRGYLEEEGLRVHTGVRVEAVAREGAF HHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEECCCEEEEECCCCCE RVRTDRGVFEAERLLVATGRRPDLEGLGLERAGVERDERGFLRLDPSLRTTNPRVYAAGD EEECCCCHHHHHHEEEECCCCCCCCCCCCHHCCCCCCCCCCEEECCCCCCCCCEEEECCC AAGLPQFVYVAAQSGRVAARNALGVKAPLDLAALPRVTFTDPALAAVGLTEEEARRRYGA CCCCCEEEEEEECCCCEEECCCCCCCCCCCHHHCCCCEECCCHHHEECCCHHHHHHHHCC GVRAATLPLSQVPKALTARDTRGAFKIVVDEEGTVLGLHVLAHEAGDVIQEGILAVKYGF CCEEEECCHHHCCHHHHCCCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHCCEEEEECC GYRDLIDTFHPYLTLAEGIRLVAQALDADPKKLSCCA CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TYDLLIVGSGSAGVAAALEASALGAKAAVVEAGVLGGTCVNVGCVPSKYLLRAADAFHR CEEEEEEECCCCCHHHHHHHHHCCCHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHH AGHPAFPGLRTEALGVDWKALLAGKEGLIAALRKEKYQEVLEAAGVPVLRGRARFLDGER CCCCCCCCCCCHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEECCCHHHCCCCE MEVEGREVLAGRYLLATGARPFLPPIPGLQESAPWTYLEALSAPALPESLLVVGGGPIGL EEECCCHHHHCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCHHH ELAQAFARLGSRVTVLEALPEVLPQEDRELARLLRGYLEEEGLRVHTGVRVEAVAREGAF HHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEECCCEEEEECCCCCE RVRTDRGVFEAERLLVATGRRPDLEGLGLERAGVERDERGFLRLDPSLRTTNPRVYAAGD EEECCCCHHHHHHEEEECCCCCCCCCCCCHHCCCCCCCCCCEEECCCCCCCCCEEEECCC AAGLPQFVYVAAQSGRVAARNALGVKAPLDLAALPRVTFTDPALAAVGLTEEEARRRYGA CCCCCEEEEEEECCCCEEECCCCCCCCCCCHHHCCCCEECCCHHHEECCCHHHHHHHHCC GVRAATLPLSQVPKALTARDTRGAFKIVVDEEGTVLGLHVLAHEAGDVIQEGILAVKYGF CCEEEECCHHHCCHHHHCCCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHCCEEEEECC GYRDLIDTFHPYLTLAEGIRLVAQALDADPKKLSCCA CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2536669; 10559175; 2067577 [H]