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The map label for this gene is nusB

Identifier: 55981090

GI number: 55981090

Start: 1066744

End: 1067199

Strand: Reverse

Name: nusB

Synonym: TTHA1121

Alternate gene names: 55981090

Gene position: 1067199-1066744 (Counterclockwise)

Preceding gene: 55981091

Following gene: 55981089

Centisome position: 57.69

GC content: 69.96

Gene sequence:

>456_bases
ATGCGCAGGCGGGCTAGGGAGCTGGCCATGCGGGCCCTCTTCGCCCACACCGTGGGGGGGATGGGGCTGGAAGAGGCCTT
CCAGCACGCCCTGGAGGAGATGGGCGGGGAGGAGGAGGGGTACGCCGAGCCCCTGGACCAGGAGGGGGTGGCCTTCGCCC
GGCGCCTCCTCTCGGGGTACAAGGCCCACCAGGAGGAGGTGGACCGGGTGCTCGAGGAGACGGTGGAGGGCTGGGACTTC
CGCCAGATGGCCAAGACGGACCTGGCCGTGCTGCGCCTGGCCGTCTACGAGATGCTCTACGAACCCACGCCCTTTGAGCC
CTTGATTGAGGTGGCGGTGAAGATCGCCAACCGCTACGGCGGCGAGCACTCGGGGAGCTTCGTCAACGGGGTCCTCGCCC
GGGTCTACCGCCGGGTGGCGGCCGGGGAGCTGAAGACGGTGGCCAAGGAGGCTTAG

Upstream 100 bases:

>100_bases
CGGGTGCAGCAGGAGGTGGACGAGGCCCTCTTCCTGGCCACGGGGAGGCGGGCGCGGGCGGTGAACGTCACCGTGGGCCA
GGTGGTGCCGAAGGAGGACC

Downstream 100 bases:

>100_bases
GTGGCGGCCCAGGTGCTTTCGGGACACGAGGCGGCGGAGGCGGTCTACGAGGAGATCCGCGCCCGGCTACGTAGCCTTTC
CTTCACGCCATCCCTGCGGG

Product: N-utilization substance protein B

Products: NA

Alternate protein names: Protein nusB

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MRRRARELAMRALFAHTVGGMGLEEAFQHALEEMGGEEEGYAEPLDQEGVAFARRLLSGYKAHQEEVDRVLEETVEGWDF
RQMAKTDLAVLRLAVYEMLYEPTPFEPLIEVAVKIANRYGGEHSGSFVNGVLARVYRRVAAGELKTVAKEA

Sequences:

>Translated_151_residues
MRRRARELAMRALFAHTVGGMGLEEAFQHALEEMGGEEEGYAEPLDQEGVAFARRLLSGYKAHQEEVDRVLEETVEGWDF
RQMAKTDLAVLRLAVYEMLYEPTPFEPLIEVAVKIANRYGGEHSGSFVNGVLARVYRRVAAGELKTVAKEA
>Mature_151_residues
MRRRARELAMRALFAHTVGGMGLEEAFQHALEEMGGEEEGYAEPLDQEGVAFARRLLSGYKAHQEEVDRVLEETVEGWDF
RQMAKTDLAVLRLAVYEMLYEPTPFEPLIEVAVKIANRYGGEHSGSFVNGVLARVYRRVAAGELKTVAKEA

Specific function: Involved in the transcription termination process

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NUSB_THET2 (Q72JL6)

Other databases:

- EMBL:   AE017221
- RefSeq:   YP_004729.1
- HSSP:   Q9X286
- ProteinModelPortal:   Q72JL6
- SMR:   Q72JL6
- STRING:   Q72JL6
- GeneID:   2775748
- GenomeReviews:   AE017221_GR
- eggNOG:   COG0781
- HOGENOM:   HBG734409
- OMA:   SDNSSRF
- ProtClustDB:   CLSK738607
- BioCyc:   TTHE262724:TT_C0756-MONOMER
- HAMAP:   MF_00073
- InterPro:   IPR011605
- InterPro:   IPR006027
- Gene3D:   G3DSA:1.10.940.10
- TIGRFAMs:   TIGR01951

Pfam domain/function: PF01029 NusB; SSF48013 NusB_RsmB_TIM44

EC number: NA

Molecular weight: Translated: 16959; Mature: 16959

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRARELAMRALFAHTVGGMGLEEAFQHALEEMGGEEEGYAEPLDQEGVAFARRLLSGY
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
KAHQEEVDRVLEETVEGWDFRQMAKTDLAVLRLAVYEMLYEPTPFEPLIEVAVKIANRYG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
GEHSGSFVNGVLARVYRRVAAGELKTVAKEA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRRRARELAMRALFAHTVGGMGLEEAFQHALEEMGGEEEGYAEPLDQEGVAFARRLLSGY
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
KAHQEEVDRVLEETVEGWDFRQMAKTDLAVLRLAVYEMLYEPTPFEPLIEVAVKIANRYG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
GEHSGSFVNGVLARVYRRVAAGELKTVAKEA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA