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The map label for this gene is 55981030

Identifier: 55981030

GI number: 55981030

Start: 1006341

End: 1008461

Strand: Reverse

Name: 55981030

Synonym: TTHA1061

Alternate gene names: NA

Gene position: 1008461-1006341 (Counterclockwise)

Preceding gene: 55981031

Following gene: 55981029

Centisome position: 54.52

GC content: 73.08

Gene sequence:

>2121_bases
ATGCTCCCCCTCAGGGTCCTGGTCCTCCTCCTGCTCCTCCTCGCCTTCCTGGACCCCAGGTGGCCCCTTGAGGGGCGGGT
GGTCTACCTCCTGGACTTCTCCCCCTCGGCCCGGGAGGCCGTCTTCGCCCTGGCCGCGAGGCTTCCCAAGGACGGGGTCT
ACGTGGCCTTCGCCGAGCGGGCCGCCACCCTGCCCTCGCCCACGGCGCGAAGGCTGGACCTTGGGGAGGGGACGGACCTC
CGGGAGGCCTACAAGGAGGCGCTCCGCCACCGGCCAAGCCGGGCGGTTTTGGTCTCCGACGGGCTTTTGGAGCCCATCCC
TCCGCCCTTTCCCCTGGACGCCCTTTACGTCCCTCCAAGGCCTTACGTGGCGGTGCGCCTTGTCCCCCCGGCCTACCCCC
TCTACGGGGAGACCGTGGGGGTGGGGGTGGTGCTGGAAGCCCCCGTGCCCGCGGAGGCGAGAGTCCGGGTGGAAGGCCCT
GGGGGGGTCCTGGAGAGGGCGTTGAGGGTGGAGGGGAGGAAGGCCCTCGTCTATACCTTTCCCCTCACGGAGAAGGCGGC
GGTCCGGGCGGTGGCGGAAGGCCCTTGGGGGCGGAGCGAGGCGGAGGTGGAGGTGGCCCCCGCCGACCGGGCGAAGGCCG
TGGTGCTGGGCGACCCGGCCGCGGCCCGCTACCTCGAGGCCCAGGGCTTCCAGGTGGAGGAGGGCTTTACGCTTCCCCTG
GAGGCGGACCTGGTGGTCGTGGGCACGGGGGTTTTGGACCTCCCCGAGGGGGCGCCCGAGGCCCTTAAGGCCTTCCTCCG
CCGGGGGGGCGGCCTCCTCTTCACCGCCACCCCGAAGGGCCTCTTCTTCGGGGGCTGGGATAGGGCTTTGCCCGAGGAGC
TTCCCCTGAAGCCCTTAGGCCGGGAGGGGGCGGCCTTGGTCCTCGTCCTGGATGTCTCGGGGAGCATGGCGGGAGAGAAG
CTCTCCATGGCGGTGGCCGGGGCCTTGGCCCTGGTGGAAAGCGCCGCCCCCGAGGACCGCCTGGGGGTGGTGGTCTTCTC
CTCGGGCCACCGGGTTCTCTTTCCCCCGAGGCCCATGACCGCCCAGGCCAAGAAGGAGGCGGAAAGCCTCCTCCTCTCCT
TAAGGGCGGGGGGGGGGACGGTCCTCGGGGGGGCCTTCCGGGAGGCGGTCCGCCTCCTCCAGGGGGTACCGGGGGAGCGG
AAGGCGGTCCTGGTCCTCACCGACGGCCTCATCGCCGACGCCAAGGAACCTATCCTGGACCTGGCCCAGACCTCCGGGGT
GGAAGTGAGCGCCCTCGCCCTGGGCCCCGACGCCGACGCCCCCTTCCTGAAGGAGCTCGCCCGGAGGGGCGGGGGACGTT
TCTACCAGGCCCCCTCTCCCAGGGAGCTTCCCCGCCTCTTCCTGCGGGAGGGGCAGGAGGTCTTCCGGGGGGAGGCCCTG
GAGGGAAGGTTCCCCGTGGAGGCCAGGCCCCACGCCCTGACCGAGGGCTTCCGCTTCCCGCCCCTTTCCGTCCTCCTCCC
CGCGAGGGCCGAGCCTTGGGCCCAGGTCCTCCTCACAAGCGGCGAGCGGGCCGTCCTCGCCATCGGGGAGCGGGGGGAGG
GGAGGGTCGCGGCCTTGGCCACGGACCTCTCCCGCTCCTGGCGGGACTTCCCCGAGGCCTCGGCCTTCCTCGGGGGGCTT
TTCCGCTGGCTCATCGGGGCGAGGCGGGCCCTCGCCCTCTACGCCTACCCGGAGGGGGAGGGGGTGAGGGTGGTGGCCTT
GGGTCCCCTGGAGGCGCCCGAGATCCTCTCGGGAGGGACGAGGCGGCCCATGGTCCCCACCGGGCCCCTCCGCTTTGAGG
CCCGGGTGGAAGGGGAGGGGGTGCTTTTGGACAGGGGGCTCCGCCTCCCCCTCGCCCTTCCCCTCCCGGGGGAGTGGAGC
CCGCGGGACGGGCGCGAGGTCCTGAGGGCCCTGGCCGAGGCCTCGGGAGGCCGGCTCCTCGCGGGCCCAGGGGAGGCCTC
CTCGGGGAAGGAGGCCCTTCCCTTGAGGCCCTTCCTCGTGGGCCTCGCCCTGGCCCTCTTCCTGTTGGAGCGCTTCCTGG
AGGCCCGCCTTGACAGGGGGGCTTCCCGTGCCCTACCTTAG

Upstream 100 bases:

>100_bases
AAGAAGGAGAAGCTCGGGCACTGGATGGATTGAGGCCGCCTTGCGCGGGCGTGGAGGCCCCGGCGAAAGGTCTCCGGGAG
GAGGAGGGTAGCATAGGGGC

Downstream 100 bases:

>100_bases
GGCAGGTATGCGCGAAGGGCCCTTGCCCTCGAGTCCCGAGCGCTGAGGGCCGCCCCCGGGCGGCCTTCGGCGGGAAAGGA
GGCCGCCTGTGGAGGAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Chloride Channel; Membrane-Associated Protein; Von Willebrand Factor; Von Willebrand Factor Type A Domain Protein

Number of amino acids: Translated: 706; Mature: 706

Protein sequence:

>706_residues
MLPLRVLVLLLLLLAFLDPRWPLEGRVVYLLDFSPSAREAVFALAARLPKDGVYVAFAERAATLPSPTARRLDLGEGTDL
REAYKEALRHRPSRAVLVSDGLLEPIPPPFPLDALYVPPRPYVAVRLVPPAYPLYGETVGVGVVLEAPVPAEARVRVEGP
GGVLERALRVEGRKALVYTFPLTEKAAVRAVAEGPWGRSEAEVEVAPADRAKAVVLGDPAAARYLEAQGFQVEEGFTLPL
EADLVVVGTGVLDLPEGAPEALKAFLRRGGGLLFTATPKGLFFGGWDRALPEELPLKPLGREGAALVLVLDVSGSMAGEK
LSMAVAGALALVESAAPEDRLGVVVFSSGHRVLFPPRPMTAQAKKEAESLLLSLRAGGGTVLGGAFREAVRLLQGVPGER
KAVLVLTDGLIADAKEPILDLAQTSGVEVSALALGPDADAPFLKELARRGGGRFYQAPSPRELPRLFLREGQEVFRGEAL
EGRFPVEARPHALTEGFRFPPLSVLLPARAEPWAQVLLTSGERAVLAIGERGEGRVAALATDLSRSWRDFPEASAFLGGL
FRWLIGARRALALYAYPEGEGVRVVALGPLEAPEILSGGTRRPMVPTGPLRFEARVEGEGVLLDRGLRLPLALPLPGEWS
PRDGREVLRALAEASGGRLLAGPGEASSGKEALPLRPFLVGLALALFLLERFLEARLDRGASRALP

Sequences:

>Translated_706_residues
MLPLRVLVLLLLLLAFLDPRWPLEGRVVYLLDFSPSAREAVFALAARLPKDGVYVAFAERAATLPSPTARRLDLGEGTDL
REAYKEALRHRPSRAVLVSDGLLEPIPPPFPLDALYVPPRPYVAVRLVPPAYPLYGETVGVGVVLEAPVPAEARVRVEGP
GGVLERALRVEGRKALVYTFPLTEKAAVRAVAEGPWGRSEAEVEVAPADRAKAVVLGDPAAARYLEAQGFQVEEGFTLPL
EADLVVVGTGVLDLPEGAPEALKAFLRRGGGLLFTATPKGLFFGGWDRALPEELPLKPLGREGAALVLVLDVSGSMAGEK
LSMAVAGALALVESAAPEDRLGVVVFSSGHRVLFPPRPMTAQAKKEAESLLLSLRAGGGTVLGGAFREAVRLLQGVPGER
KAVLVLTDGLIADAKEPILDLAQTSGVEVSALALGPDADAPFLKELARRGGGRFYQAPSPRELPRLFLREGQEVFRGEAL
EGRFPVEARPHALTEGFRFPPLSVLLPARAEPWAQVLLTSGERAVLAIGERGEGRVAALATDLSRSWRDFPEASAFLGGL
FRWLIGARRALALYAYPEGEGVRVVALGPLEAPEILSGGTRRPMVPTGPLRFEARVEGEGVLLDRGLRLPLALPLPGEWS
PRDGREVLRALAEASGGRLLAGPGEASSGKEALPLRPFLVGLALALFLLERFLEARLDRGASRALP
>Mature_706_residues
MLPLRVLVLLLLLLAFLDPRWPLEGRVVYLLDFSPSAREAVFALAARLPKDGVYVAFAERAATLPSPTARRLDLGEGTDL
REAYKEALRHRPSRAVLVSDGLLEPIPPPFPLDALYVPPRPYVAVRLVPPAYPLYGETVGVGVVLEAPVPAEARVRVEGP
GGVLERALRVEGRKALVYTFPLTEKAAVRAVAEGPWGRSEAEVEVAPADRAKAVVLGDPAAARYLEAQGFQVEEGFTLPL
EADLVVVGTGVLDLPEGAPEALKAFLRRGGGLLFTATPKGLFFGGWDRALPEELPLKPLGREGAALVLVLDVSGSMAGEK
LSMAVAGALALVESAAPEDRLGVVVFSSGHRVLFPPRPMTAQAKKEAESLLLSLRAGGGTVLGGAFREAVRLLQGVPGER
KAVLVLTDGLIADAKEPILDLAQTSGVEVSALALGPDADAPFLKELARRGGGRFYQAPSPRELPRLFLREGQEVFRGEAL
EGRFPVEARPHALTEGFRFPPLSVLLPARAEPWAQVLLTSGERAVLAIGERGEGRVAALATDLSRSWRDFPEASAFLGGL
FRWLIGARRALALYAYPEGEGVRVVALGPLEAPEILSGGTRRPMVPTGPLRFEARVEGEGVLLDRGLRLPLALPLPGEWS
PRDGREVLRALAEASGGRLLAGPGEASSGKEALPLRPFLVGLALALFLLERFLEARLDRGASRALP

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75303; Mature: 75303

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPLRVLVLLLLLLAFLDPRWPLEGRVVYLLDFSPSAREAVFALAARLPKDGVYVAFAER
CCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECC
AATLPSPTARRLDLGEGTDLREAYKEALRHRPSRAVLVSDGLLEPIPPPFPLDALYVPPR
CCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEECCC
PYVAVRLVPPAYPLYGETVGVGVVLEAPVPAEARVRVEGPGGVLERALRVEGRKALVYTF
CEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHCCCCEEEEEEE
PLTEKAAVRAVAEGPWGRSEAEVEVAPADRAKAVVLGDPAAARYLEAQGFQVEEGFTLPL
CCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEECCHHHHHHHCCCEEECCCEECCC
EADLVVVGTGVLDLPEGAPEALKAFLRRGGGLLFTATPKGLFFGGWDRALPEELPLKPLG
CCCEEEEECCCEECCCCCHHHHHHHHHCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCC
REGAALVLVLDVSGSMAGEKLSMAVAGALALVESAAPEDRLGVVVFSSGHRVLFPPRPMT
CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEECCCCCC
AQAKKEAESLLLSLRAGGGTVLGGAFREAVRLLQGVPGERKAVLVLTDGLIADAKEPILD
HHHHHHHHHHEEEEECCCCEEECHHHHHHHHHHHCCCCCCEEEEEEECCCHHCCHHHHHH
LAQTSGVEVSALALGPDADAPFLKELARRGGGRFYQAPSPRELPRLFLREGQEVFRGEAL
HHHCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCHHHHCCCCC
EGRFPVEARPHALTEGFRFPPLSVLLPARAEPWAQVLLTSGERAVLAIGERGEGRVAALA
CCCCCCCCCCCHHHCCCCCCCHHEEECCCCCHHHHHHHCCCCEEEEEECCCCCCEEEEEE
TDLSRSWRDFPEASAFLGGLFRWLIGARRALALYAYPEGEGVRVVALGPLEAPEILSGGT
HHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEEEECCCCCCHHHCCCC
RRPMVPTGPLRFEARVEGEGVLLDRGLRLPLALPLPGEWSPRDGREVLRALAEASGGRLL
CCCCCCCCCCEEEEEECCCEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCEEE
AGPGEASSGKEALPLRPFLVGLALALFLLERFLEARLDRGASRALP
ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure
MLPLRVLVLLLLLLAFLDPRWPLEGRVVYLLDFSPSAREAVFALAARLPKDGVYVAFAER
CCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECC
AATLPSPTARRLDLGEGTDLREAYKEALRHRPSRAVLVSDGLLEPIPPPFPLDALYVPPR
CCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEECCC
PYVAVRLVPPAYPLYGETVGVGVVLEAPVPAEARVRVEGPGGVLERALRVEGRKALVYTF
CEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHCCCCEEEEEEE
PLTEKAAVRAVAEGPWGRSEAEVEVAPADRAKAVVLGDPAAARYLEAQGFQVEEGFTLPL
CCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEECCHHHHHHHCCCEEECCCEECCC
EADLVVVGTGVLDLPEGAPEALKAFLRRGGGLLFTATPKGLFFGGWDRALPEELPLKPLG
CCCEEEEECCCEECCCCCHHHHHHHHHCCCCEEEEECCCCEEECCCCCCCCCCCCCCCCC
REGAALVLVLDVSGSMAGEKLSMAVAGALALVESAAPEDRLGVVVFSSGHRVLFPPRPMT
CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEECCCCCC
AQAKKEAESLLLSLRAGGGTVLGGAFREAVRLLQGVPGERKAVLVLTDGLIADAKEPILD
HHHHHHHHHHEEEEECCCCEEECHHHHHHHHHHHCCCCCCEEEEEEECCCHHCCHHHHHH
LAQTSGVEVSALALGPDADAPFLKELARRGGGRFYQAPSPRELPRLFLREGQEVFRGEAL
HHHCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCHHHHCCCCC
EGRFPVEARPHALTEGFRFPPLSVLLPARAEPWAQVLLTSGERAVLAIGERGEGRVAALA
CCCCCCCCCCCHHHCCCCCCCHHEEECCCCCHHHHHHHCCCCEEEEEECCCCCCEEEEEE
TDLSRSWRDFPEASAFLGGLFRWLIGARRALALYAYPEGEGVRVVALGPLEAPEILSGGT
HHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEEEECCCCCCHHHCCCC
RRPMVPTGPLRFEARVEGEGVLLDRGLRLPLALPLPGEWSPRDGREVLRALAEASGGRLL
CCCCCCCCCCEEEEEECCCEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCEEE
AGPGEASSGKEALPLRPFLVGLALALFLLERFLEARLDRGASRALP
ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA