| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980983
Identifier: 55980983
GI number: 55980983
Start: 958574
End: 961255
Strand: Reverse
Name: 55980983
Synonym: TTHA1014
Alternate gene names: NA
Gene position: 961255-958574 (Counterclockwise)
Preceding gene: 55980984
Following gene: 55980982
Centisome position: 51.97
GC content: 67.45
Gene sequence:
>2682_bases ATGGCGCTTCCGGCGTGGCGAGAAGTGGCACTGCCCCACGAGGACATCCGCCGGGGCAGGTTTGACGAGTCCACCTTTGC GGCCGATCTGGCCGATGTGCTGGCGGGCCGTGGGCCCTTGGAGTACCGCGACCCTCTCACTTTCTTCCGCAAGACCTATC CCACCAAGGGGATGGTCCGGCTCCTCGGGGCGGTGGTGCGCCGCCTCTCCGGGGAGAAGGGGGGCGAGCCCGTGGTCCAG ATCCAGACTCCCTTCGGCGGGGGGAAGACCCACGGCCTCGTGGCCCTCTACCACCTCTTCCGCTCGGGCGAGGAGGCGAG GGGGACGGAGCTTTACGCCCGGGTCCTCGAGGAGGCGGGCGTGGAGAGGATCCCGGAGGCCAAGGTGGCCGTCTTCGTGG GCACGGCCGCAGACCCCCTGAAGGGCCGCACCCCTTGGGGGGAGCTTGCCCTCCAGCTTGGGCACTACGGCCTCCTGGAG GAGCACGACAAGGCCCGCCAGGCCCCGGGGAAGGAGCGGCTATACGAGCTCTTCCGGGCGGCGGGCGGCCCGGTCCTCAT TCTGATGGACGAGGTGGCGGAGTACGTGGCCCGCACCGTGGACCCCACGGCCTTGCACAAGGAGGGGGGGAGCCTCGAGG GGGGGCGGGCCTACCAGACCCAGGTGCTCGCCTTCTTCCAGGAGCTCACCGAGGCGGTCAAGGTGGCGCCCCAGGTGGCC TTGGTCATGACCATTCCCTCCAGCGCCCCCTACGGCGAGGAAGGAGAGCGGGCCCTCCTCCAGCTTCAGCGGATCGCCGG GCGGTTGGAAGCGATCTACGAGCCCGTTAAGGGCTGGGAGATCTACGACGTCATCCGCACGCGCCTCTTTGAGGGGATTC GGGACGAGGGGGTGGTCCGGAAGGTGGCCGAACGCTACTTTGAGCTCTATCGCCGCCTGGGGACCGAGGTGCCCGACGAG GCCCGCGACCCTGCCTACCGGGAGCGCATGCGGAGGGCCTACCCTTTCCATCCCGAGCTCATAGACGCGCTCTACGAGCG GTGGGGAACCCTTTCCACCTTCCAGCGGACGCGGGGGGTGCTCCGCTTCCTGGCGGAGATCGTGGCCGACCTCTACGGCC GCGAGCATTCGGCCCCCCTGATCCACTCGGCCCACGTCAACCTGGCGAATCCGAGCATCCGGCGGGAGCTGGTGAAGCAC ATCGGCAACGAGTTTGACAGCGTGATCGCCGCCGACATCGCCGACCCAGAGGGGCAGGCCAAGGCCCAGCGCTTGGACCG GGAGATGGGCTCAGAGTACGTCCGCTTCCAGGTGGCCTCCGGGCTCGCCACGGCCATCTTCCTCTACTCCTTCAGCGGCG GCGAGCGCAAGGGGGCGAGCCCCGCTCAGCTCCGGCTGGCCGCCCTGCGCCCTGAGGTTCCGCCCCCCTTGGTGGGCGAT GCCCTAGGGCGCCTGCGGGAACTCCTCTGGTATCTGCACGAGGCCTCCGGGCTTTACTACTTCTCCAGCCAGCCCAATCT CAACCGCATCGTGGTGGAGCGCGAGAACGCCGTTGACCCCGAACAGATCAGGCAGGCGCTAAGGGAGCGGCTTGAGAGGA TCGCCGGGCGGGAGCTTAGGGTCTACCTCGAGCCCCATTCCCCGCAGGACGTGCCCGACACCAAAGAGCTTAAGCTCGCT GTTCTCTCGGAGCCCTCCGGGAGTCTCGCCGAGGAGCTTCTGGAGAAGGCGGGCACCACCTTCCGTACCTACAAGAACAC CCTCTTCCTCCTCTCGCCCGACCCCAACAGCCTAGGGGACCTCCACCGCGCGGCGCGACGCTACCTGGCCTTGCGGTCCA TACGCGAGGACCGCACCCTCTACGGCCAGCTTTCCGCGGAGAACCGCCACCGCCTGGACGAACTCCTTCGGGAAGCCGAT GGGGCGCTCACCCAAAAGCTTTTCATGGCCTACCGCCGCCTGACGAAGCCCGGGCGCCAAGGGCCGGAGACCTACGACAT GGGCATCCCCACCGTGGGGGAGGCCTCCACTCTGGCCAAGCGGGTCTACGAATACTTAAAGGCCCGGGAGTTCCTCTTGG AGCGCATCGCCCCCCGGCACCTGCTTTCGGCCCTGGCCCAGGGAGAGACGGGGAAGCCCCTCCAAGAGGTATACGAGGCC TTCCTTCGCTACCCCCACCTTCCGGTCCTGAAGGGTTGGGAGGTCCTCGAGGAGGCGGTGCGGAAGGGGGTGGCGGAGGG GACGTTCGGACTGCGGGTAGGGGAGCGCTACTACTTCCAGGAGCCCGTGCTCGGGATCGCCTGGGAGGAGGCCTTCCTCG TCCGCAAGGAGGCCCTTCCTCCCGAGAGGGAATCCGTGGTGGATGGGGAGAAGAAGGGTGAGGCTTCCTCGGAAGGGGTT GCGCCTAAGCCGGATTCTTCTGAGGAAGAAGTGCCCCCCGATTCCTCGGGGGGAGAGGCTCGGCCAGAGCGGGTGCAGGA ATACACTGTGAAGGTCCGGCTCCCCTGGAACAGGCTTTCCGACTTCCTGCGCGGGGTCTTAATGCCCTTGCAGAGGGAAG GTGCGGAGATGGAGCTCCAGATAGAGCTTAGAGCCCGCTCCCAGGAGGGGATTCCCCGGGCCACCTTGGACAAGATACGG GAGACGCTGGACCAGCTGCAGGCCAAGGTAGAGGAAGCCTGA
Upstream 100 bases:
>100_bases TGTTGGACTTCACCCGCAGATCGAGAAGGTGCTCGCCGAGGAAAGGGCGAGGGAGCGTCCCAAGCGTGAGAAAGACCGGG AGAAAGGAGGAATGAGGCCA
Downstream 100 bases:
>100_bases TCGGGGGGAGCGTCCCCCACCCCTGGGCCTTGCGGTGCGGTATCCTGGTAGACGTGCGTACCCTCAAGGTACAGGCCCTG TGGGATGGGGAAGCCGGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: ATPase-Like Protein; ATPase; Cytoplasmic Protein; ATPase Of AAA+ Class; Protein Kinase ATPase
Number of amino acids: Translated: 893; Mature: 892
Protein sequence:
>893_residues MALPAWREVALPHEDIRRGRFDESTFAADLADVLAGRGPLEYRDPLTFFRKTYPTKGMVRLLGAVVRRLSGEKGGEPVVQ IQTPFGGGKTHGLVALYHLFRSGEEARGTELYARVLEEAGVERIPEAKVAVFVGTAADPLKGRTPWGELALQLGHYGLLE EHDKARQAPGKERLYELFRAAGGPVLILMDEVAEYVARTVDPTALHKEGGSLEGGRAYQTQVLAFFQELTEAVKVAPQVA LVMTIPSSAPYGEEGERALLQLQRIAGRLEAIYEPVKGWEIYDVIRTRLFEGIRDEGVVRKVAERYFELYRRLGTEVPDE ARDPAYRERMRRAYPFHPELIDALYERWGTLSTFQRTRGVLRFLAEIVADLYGREHSAPLIHSAHVNLANPSIRRELVKH IGNEFDSVIAADIADPEGQAKAQRLDREMGSEYVRFQVASGLATAIFLYSFSGGERKGASPAQLRLAALRPEVPPPLVGD ALGRLRELLWYLHEASGLYYFSSQPNLNRIVVERENAVDPEQIRQALRERLERIAGRELRVYLEPHSPQDVPDTKELKLA VLSEPSGSLAEELLEKAGTTFRTYKNTLFLLSPDPNSLGDLHRAARRYLALRSIREDRTLYGQLSAENRHRLDELLREAD GALTQKLFMAYRRLTKPGRQGPETYDMGIPTVGEASTLAKRVYEYLKAREFLLERIAPRHLLSALAQGETGKPLQEVYEA FLRYPHLPVLKGWEVLEEAVRKGVAEGTFGLRVGERYYFQEPVLGIAWEEAFLVRKEALPPERESVVDGEKKGEASSEGV APKPDSSEEEVPPDSSGGEARPERVQEYTVKVRLPWNRLSDFLRGVLMPLQREGAEMELQIELRARSQEGIPRATLDKIR ETLDQLQAKVEEA
Sequences:
>Translated_893_residues MALPAWREVALPHEDIRRGRFDESTFAADLADVLAGRGPLEYRDPLTFFRKTYPTKGMVRLLGAVVRRLSGEKGGEPVVQ IQTPFGGGKTHGLVALYHLFRSGEEARGTELYARVLEEAGVERIPEAKVAVFVGTAADPLKGRTPWGELALQLGHYGLLE EHDKARQAPGKERLYELFRAAGGPVLILMDEVAEYVARTVDPTALHKEGGSLEGGRAYQTQVLAFFQELTEAVKVAPQVA LVMTIPSSAPYGEEGERALLQLQRIAGRLEAIYEPVKGWEIYDVIRTRLFEGIRDEGVVRKVAERYFELYRRLGTEVPDE ARDPAYRERMRRAYPFHPELIDALYERWGTLSTFQRTRGVLRFLAEIVADLYGREHSAPLIHSAHVNLANPSIRRELVKH IGNEFDSVIAADIADPEGQAKAQRLDREMGSEYVRFQVASGLATAIFLYSFSGGERKGASPAQLRLAALRPEVPPPLVGD ALGRLRELLWYLHEASGLYYFSSQPNLNRIVVERENAVDPEQIRQALRERLERIAGRELRVYLEPHSPQDVPDTKELKLA VLSEPSGSLAEELLEKAGTTFRTYKNTLFLLSPDPNSLGDLHRAARRYLALRSIREDRTLYGQLSAENRHRLDELLREAD GALTQKLFMAYRRLTKPGRQGPETYDMGIPTVGEASTLAKRVYEYLKAREFLLERIAPRHLLSALAQGETGKPLQEVYEA FLRYPHLPVLKGWEVLEEAVRKGVAEGTFGLRVGERYYFQEPVLGIAWEEAFLVRKEALPPERESVVDGEKKGEASSEGV APKPDSSEEEVPPDSSGGEARPERVQEYTVKVRLPWNRLSDFLRGVLMPLQREGAEMELQIELRARSQEGIPRATLDKIR ETLDQLQAKVEEA >Mature_892_residues ALPAWREVALPHEDIRRGRFDESTFAADLADVLAGRGPLEYRDPLTFFRKTYPTKGMVRLLGAVVRRLSGEKGGEPVVQI QTPFGGGKTHGLVALYHLFRSGEEARGTELYARVLEEAGVERIPEAKVAVFVGTAADPLKGRTPWGELALQLGHYGLLEE HDKARQAPGKERLYELFRAAGGPVLILMDEVAEYVARTVDPTALHKEGGSLEGGRAYQTQVLAFFQELTEAVKVAPQVAL VMTIPSSAPYGEEGERALLQLQRIAGRLEAIYEPVKGWEIYDVIRTRLFEGIRDEGVVRKVAERYFELYRRLGTEVPDEA RDPAYRERMRRAYPFHPELIDALYERWGTLSTFQRTRGVLRFLAEIVADLYGREHSAPLIHSAHVNLANPSIRRELVKHI GNEFDSVIAADIADPEGQAKAQRLDREMGSEYVRFQVASGLATAIFLYSFSGGERKGASPAQLRLAALRPEVPPPLVGDA LGRLRELLWYLHEASGLYYFSSQPNLNRIVVERENAVDPEQIRQALRERLERIAGRELRVYLEPHSPQDVPDTKELKLAV LSEPSGSLAEELLEKAGTTFRTYKNTLFLLSPDPNSLGDLHRAARRYLALRSIREDRTLYGQLSAENRHRLDELLREADG ALTQKLFMAYRRLTKPGRQGPETYDMGIPTVGEASTLAKRVYEYLKAREFLLERIAPRHLLSALAQGETGKPLQEVYEAF LRYPHLPVLKGWEVLEEAVRKGVAEGTFGLRVGERYYFQEPVLGIAWEEAFLVRKEALPPERESVVDGEKKGEASSEGVA PKPDSSEEEVPPDSSGGEARPERVQEYTVKVRLPWNRLSDFLRGVLMPLQREGAEMELQIELRARSQEGIPRATLDKIRE TLDQLQAKVEEA
Specific function: Unknown
COG id: COG1483
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 100500; Mature: 100368
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPAWREVALPHEDIRRGRFDESTFAADLADVLAGRGPLEYRDPLTFFRKTYPTKGMVR CCCCCCHHHCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHH LLGAVVRRLSGEKGGEPVVQIQTPFGGGKTHGLVALYHLFRSGEEARGTELYARVLEEAG HHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC VERIPEAKVAVFVGTAADPLKGRTPWGELALQLGHYGLLEEHDKARQAPGKERLYELFRA HHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHH AGGPVLILMDEVAEYVARTVDPTALHKEGGSLEGGRAYQTQVLAFFQELTEAVKVAPQVA CCCCEEEEHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEE LVMTIPSSAPYGEEGERALLQLQRIAGRLEAIYEPVKGWEIYDVIRTRLFEGIRDEGVVR EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHH KVAERYFELYRRLGTEVPDEARDPAYRERMRRAYPFHPELIDALYERWGTLSTFQRTRGV HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHH LRFLAEIVADLYGREHSAPLIHSAHVNLANPSIRRELVKHIGNEFDSVIAADIADPEGQA HHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH KAQRLDREMGSEYVRFQVASGLATAIFLYSFSGGERKGASPAQLRLAALRPEVPPPLVGD HHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHH ALGRLRELLWYLHEASGLYYFSSQPNLNRIVVERENAVDPEQIRQALRERLERIAGRELR HHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEE VYLEPHSPQDVPDTKELKLAVLSEPSGSLAEELLEKAGTTFRTYKNTLFLLSPDPNSLGD EEECCCCCCCCCCHHHEEEEEECCCCHHHHHHHHHHCCCEEEEECCEEEEECCCCCHHHH LHRAARRYLALRSIREDRTLYGQLSAENRHRLDELLREADGALTQKLFMAYRRLTKPGRQ HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GPETYDMGIPTVGEASTLAKRVYEYLKAREFLLERIAPRHLLSALAQGETGKPLQEVYEA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHH FLRYPHLPVLKGWEVLEEAVRKGVAEGTFGLRVGERYYFQEPVLGIAWEEAFLVRKEALP HHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHEECCHHHHHCCCHHHHHHHHHHHHHHCCC PERESVVDGEKKGEASSEGVAPKPDSSEEEVPPDSSGGEARPERVQEYTVKVRLPWNRLS CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHEEEEEECCHHHHH DFLRGVLMPLQREGAEMELQIELRARSQEGIPRATLDKIRETLDQLQAKVEEA HHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALPAWREVALPHEDIRRGRFDESTFAADLADVLAGRGPLEYRDPLTFFRKTYPTKGMVR CCCCCHHHCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHH LLGAVVRRLSGEKGGEPVVQIQTPFGGGKTHGLVALYHLFRSGEEARGTELYARVLEEAG HHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC VERIPEAKVAVFVGTAADPLKGRTPWGELALQLGHYGLLEEHDKARQAPGKERLYELFRA HHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHH AGGPVLILMDEVAEYVARTVDPTALHKEGGSLEGGRAYQTQVLAFFQELTEAVKVAPQVA CCCCEEEEHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEE LVMTIPSSAPYGEEGERALLQLQRIAGRLEAIYEPVKGWEIYDVIRTRLFEGIRDEGVVR EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHH KVAERYFELYRRLGTEVPDEARDPAYRERMRRAYPFHPELIDALYERWGTLSTFQRTRGV HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHH LRFLAEIVADLYGREHSAPLIHSAHVNLANPSIRRELVKHIGNEFDSVIAADIADPEGQA HHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH KAQRLDREMGSEYVRFQVASGLATAIFLYSFSGGERKGASPAQLRLAALRPEVPPPLVGD HHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHH ALGRLRELLWYLHEASGLYYFSSQPNLNRIVVERENAVDPEQIRQALRERLERIAGRELR HHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEE VYLEPHSPQDVPDTKELKLAVLSEPSGSLAEELLEKAGTTFRTYKNTLFLLSPDPNSLGD EEECCCCCCCCCCHHHEEEEEECCCCHHHHHHHHHHCCCEEEEECCEEEEECCCCCHHHH LHRAARRYLALRSIREDRTLYGQLSAENRHRLDELLREADGALTQKLFMAYRRLTKPGRQ HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GPETYDMGIPTVGEASTLAKRVYEYLKAREFLLERIAPRHLLSALAQGETGKPLQEVYEA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHH FLRYPHLPVLKGWEVLEEAVRKGVAEGTFGLRVGERYYFQEPVLGIAWEEAFLVRKEALP HHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHEECCHHHHHCCCHHHHHHHHHHHHHHCCC PERESVVDGEKKGEASSEGVAPKPDSSEEEVPPDSSGGEARPERVQEYTVKVRLPWNRLS CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHEEEEEECCHHHHH DFLRGVLMPLQREGAEMELQIELRARSQEGIPRATLDKIRETLDQLQAKVEEA HHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA