Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

Click here to switch to the map view.

The map label for this gene is 55980984

Identifier: 55980984

GI number: 55980984

Start: 961438

End: 961734

Strand: Reverse

Name: 55980984

Synonym: TTHA1015

Alternate gene names: NA

Gene position: 961734-961438 (Counterclockwise)

Preceding gene: 55980985

Following gene: 55980983

Centisome position: 51.99

GC content: 61.95

Gene sequence:

>297_bases
ATGACAACGAAGGTCAAGGGGAAAGGGCCACCGAAGACGCTGGAGGAGATCCGCCGGATCTTGAAGGCACACAAGGCGGA
GCTGGCGGCCCAATACGGTGTGCAGCGGATCGCCGTCTTCGGCTCTTACGCCCGAGGAGGGGCCACGCCCGAGAGCGATT
TGGACCTTCTGGTGGAGTTCTCCCCCCCTCCGGGGCTGCTCAAGTTTGTCGAGCTTGAGCGCCGCTTGAGCGAGCTTTTG
GGCGTAAAGGTAGAACTGGTCACGCCAAACGCCCTAAAGCCCCACCCACATCGGTAG

Upstream 100 bases:

>100_bases
GGTCCCCCGGCCAGGGCGGCCTCTTTGAGTCCGAGCAGGGCTGAGATGGTGACGCGGGTTTGGAACCGCTAAGATGGGCT
GAGCGAAGACAGGAGTCGCC

Downstream 100 bases:

>100_bases
GCGGGTCCTCAAGGAGATCGCCGAGGTATGAAGCGCACCCTCCTGGACTATCTGGAGGACATGCAGGCCTCCGCCCTTGA
GGTGTTGGACTTCACCCGCA

Product: nucleotidyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MTTKVKGKGPPKTLEEIRRILKAHKAELAAQYGVQRIAVFGSYARGGATPESDLDLLVEFSPPPGLLKFVELERRLSELL
GVKVELVTPNALKPHPHR

Sequences:

>Translated_98_residues
MTTKVKGKGPPKTLEEIRRILKAHKAELAAQYGVQRIAVFGSYARGGATPESDLDLLVEFSPPPGLLKFVELERRLSELL
GVKVELVTPNALKPHPHR
>Mature_97_residues
TTKVKGKGPPKTLEEIRRILKAHKAELAAQYGVQRIAVFGSYARGGATPESDLDLLVEFSPPPGLLKFVELERRLSELLG
VKVELVTPNALKPHPHR

Specific function: Unknown

COG id: COG1669

COG function: function code R; Predicted nucleotidyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the M.jannaschii MJ0126/MJ0128/MJ0141/MJ0435/MJ0604/MJ1215/MJ1217/MJ1305/MJ1379 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002934 [H]

Pfam domain/function: PF01909 NTP_transf_2 [H]

EC number: NA

Molecular weight: Translated: 10808; Mature: 10677

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKVKGKGPPKTLEEIRRILKAHKAELAAQYGVQRIAVFGSYARGGATPESDLDLLVEF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE
SPPPGLLKFVELERRLSELLGVKVELVTPNALKPHPHR
CCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCC
>Mature Secondary Structure 
TTKVKGKGPPKTLEEIRRILKAHKAELAAQYGVQRIAVFGSYARGGATPESDLDLLVEF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE
SPPPGLLKFVELERRLSELLGVKVELVTPNALKPHPHR
CCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]